06 FPBasic
06 FPBasic
06 FPBasic
Concepts and
Techniques
1
Mining Frequent Patterns, Association and
Correlations: Basic Concepts and Methods
Basic Concepts
Evaluation Methods
Summary
2
What Is Frequent Pattern
Analysis?
Frequent pattern: a pattern (a set of items, subsequences, substructures,
etc.) that occurs frequently in a data set
First proposed by Agrawal, Imielinski, and Swami [AIS93] in the context of
frequent itemsets and association rule mining
Motivation: Finding inherent regularities in data
What products were often purchased together?— Beer and diapers?!
What are the subsequent purchases after buying a PC?
What kinds of DNA are sensitive to this new drug?
Can we automatically classify web documents?
Applications
Basket data analysis, cross-marketing, catalog design, sale campaign
analysis, Web log (click stream) analysis, and DNA sequence analysis.
3
Why Is Freq. Pattern Mining
Important?
Freq. pattern: An intrinsic and important property of
datasets
Foundation for many essential data mining tasks
Association, correlation, and causality analysis
Sequential, structural (e.g., sub-graph) patterns
Pattern analysis in spatiotemporal, multimedia,
time-series, and stream data
Classification: discriminative, frequent pattern
analysis
Cluster analysis: frequent pattern-based clustering
Data warehousing: iceberg cube and cube-gradient
Semantic data compression: fascicles
Broad applications
4
Basic Concepts: Frequent
Patterns
7
Closed Patterns and Max-
Patterns
Exercise. DB = {<a1, …, a100>, < a1, …, a50>}
Min_sup = 1.
What is the set of closed itemset?
<a1, …, a100>: 1
< a1, …, a50>: 2
What is the set of max-pattern?
<a1, …, a100>: 1
What is the set of all patterns?
!!
8
Computational Complexity of Frequent
Itemset Mining
How many itemsets are potentially to be generated in the worst
case?
The number of frequent itemsets to be generated is senstive to
the minsup threshold
When minsup is low, there exist potentially an exponential
number of frequent itemsets
The worst case: MN where M: # distinct items, and N: max length
of transactions
The worst case complexty vs. the expected probability
Ex. Suppose Walmart has 104 kinds of products
The chance to pick up one product 10-4
The chance to pick up a particular set of 10 products: ~10 -40
What is the chance this particular set of 10 products to be
frequent 103 times in 109 transactions?
9
Mining Frequent Patterns, Association and
Correlations: Basic Concepts and Methods
Basic Concepts
Evaluation Methods
Summary
10
Scalable Frequent Itemset Mining
Methods
Approach
Approach
Data Format
11
The Downward Closure Property and
Scalable Mining Methods
The downward closure property of frequent patterns
Any subset of a frequent itemset must be
frequent
If {beer, diaper, nuts} is frequent, so is {beer,
diaper}
i.e., every transaction having {beer, diaper, nuts}
@SIGMOD’00)
Vertical data format approach (Charm—Zaki &
Hsiao @SDM’02) 12
Apriori: A Candidate Generation & Test
Approach
C3 Itemset
3rd scan L3 Itemset sup
{B, C, E} {B, C, E} 2
14
The Apriori Algorithm (Pseudo-
Code)
L1 = {frequent items};
for (k = 1; Lk !=; k++) do begin
Ck+1 = candidates generated from Lk;
for each transaction t in database do
increment the count of all candidates in Ck+1
that are contained in t
Lk+1 = candidates in Ck+1 with min_support
end
return k Lk; 15
Implementation of Apriori
How to generate candidates?
Step 1: self-joining Lk
Step 2: pruning
Example of Candidate-generation
L3={abc, abd, acd, ace, bcd}
Self-joining: L3*L3
abcd from abc and abd
acde from acd and ace
Pruning:
acde is removed because ade is not in L3
C4 = {abcd}
16
How to Count Supports of Candidates?
17
Counting Supports of Candidates Using Hash
Tree
Subset function
Transaction: 1 2 3 5 6
3,6,9
1,4,7
2,5,8
1+2356
13+56 234
567
145 345 356 367
136 368
357
12+356
689
124
457 125 159
458
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Candidate Generation: An SQL
Implementation
SQL Implementation of candidate generation
Suppose the items in Lk-1 are listed in an order
Step 1: self-joining Lk-1
insert into Ck
select p.item1, p.item2, …, p.itemk-1, q.itemk-1
from Lk-1 p, Lk-1 q
where p.item1=q.item1, …, p.itemk-2=q.itemk-2, p.itemk-1 <
q.itemk-1
Step 2: pruning
forall itemsets c in Ck do
forall (k-1)-subsets s of c do
if (s is not in Lk-1) then delete c from Ck
Use object-relational extensions like UDFs, BLOBs, and Table functions
for efficient implementation [See: S. Sarawagi, S. Thomas, and R.
Agrawal. Integrating association rule mining with relational database
systems: Alternatives and implications. SIGMOD’98]
19
Scalable Frequent Itemset Mining
Methods
Format
… 10 {yz, qs,
2Hash
wt}
Table
Frequent 1-itemset: a, b, d, e
ab is not a candidate 2-itemset if the sum of count of {ab,
ad, ae} is below support threshold
J. Park, M. Chen, and P. Yu. An effective hash-based algorithm
for mining association rules. SIGMOD’95
23
Sampling for Frequent Patterns
ABCD
Once both A and D are determined
frequent, the counting of AD begins
ABC ABD ACD BCD Once all length-2 subsets of BCD are
determined frequent, the counting of
BCD begins
AB AC BC AD BD CD
Transactions
1-itemsets
A B C D
Apriori 2-itemsets
…
{}
Itemset lattice 1-itemsets
2-items
S. Brin R. Motwani, J. Ullman,
and S. Tsur. Dynamic itemset DIC 3-items
counting and implication
rules for market basket data.
SIGMOD’97 25
Scalable Frequent Itemset Mining
Methods
Format
Patterns containing p
…
Pattern f
29
Find Patterns Having P From P-conditional
Database
{}
Cond. pattern base of “cam”: (f:3) f:3
cam-conditional FP-tree
32
A Special Case: Single Prefix Path in FP-
tree
a3:n3
{} r1
C2:k2 C3:k3
a3:n3 C2:k2 C3:k3
33
Benefits of the FP-tree Structure
Completeness
Preserve complete information for frequent
pattern mining
Never break a long pattern of any transaction
Compactness
Reduce irrelevant info—infrequent items are gone
Items in frequency descending order: the more
frequently occurring, the more likely to be shared
Never be larger than the original database (not
count node-links and the count field)
34
The Frequent Pattern Growth Mining
Method
Idea: Frequent pattern growth
Recursively grow frequent patterns by pattern
conditional FP-tree
Until the resulting FP-tree is empty, or it
35
Scaling FP-growth by Database
Projection
What about if FP-tree cannot fit in memory?
DB projection
First partition a database into a set of projected DBs
Then construct and mine FP-tree for each projected DB
Parallel projection vs. partition projection techniques
Parallel projection
Project the DB in parallel for each frequent item
Parallel projection is space costly
All the partitions can be processed in parallel
Partition projection
Partition the DB based on the ordered frequent items
Passing the unprocessed parts to the subsequent
partitions
36
Partition-Based Projection
am-proj DB cm-proj DB
fc f …
fc f
fc f
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Performance of FPGrowth in Large
Datasets
100
140
90 D1 FP-grow th runtime D2 FP-growth
80
D1 Apriori runtime 120 D2 TreeProjection
70 100
Run time(sec.)
Runtime (sec.)
60
80
50 Data set T25I20D10K Data set T25I20D100K
40 60
30 40
20
20
10
0 0
0 0.5 1 1.5 2 2.5 3 0 0.5 1 1.5 2
Support threshold(%)
Support threshold (%)
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Advantages of the Pattern Growth
Approach
Divide-and-conquer:
Decompose both the mining task and DB according to the
frequent patterns obtained so far
Lead to focused search of smaller databases
Other factors
No candidate generation, no candidate test
Compressed database: FP-tree structure
No repeated scan of entire database
Basic ops: counting local freq items and building sub FP-
tree, no pattern search and matching
A good open-source implementation and refinement of
FPGrowth
FPGrowth+ (Grahne and J. Zhu, FIMI'03)
39
Further Improvements of Mining
Methods
40
Extension of Pattern Growth Mining
Methodology
Mining closed frequent itemsets and max-patterns
CLOSET (DMKD’00), FPclose, and FPMax (Grahne & Zhu,
Fimi’03)
Mining sequential patterns
PrefixSpan (ICDE’01), CloSpan (SDM’03), BIDE (ICDE’04)
Pattern-growth-based Clustering
MaPle (Pei, et al., ICDM’03)
Pattern-Growth-Based Classification
Mining frequent and discriminative patterns (Cheng, et al,
ICDE’07) 41
Scalable Frequent Itemset Mining
Methods
Format
Format
49
Visualization of Association Rules: Rule
Graph
50
Visualization of Association
Rules
(SGI/MineSet 3.0)
51
Mining Frequent Patterns, Association and
Correlations: Basic Concepts and Methods
Basic Concepts
Evaluation Methods
Summary
52
Interestingness Measure: Correlations
(Lift)
play basketball eat cereal [40%, 66.7%] is misleading
The overall % of students eating cereal is 75% > 66.7%.
play basketball not eat cereal [20%, 33.3%] is more
accurate, although with lower support and confidence
Measure of dependent/correlated events: lift
53
Are lift and 2 Good Measures of Correlation?
55
Comparison of Interestingness
Measures
Null-(transaction) invariance is crucial for correlation analysis
Lift and 2 are not null-invariant
5 null-invariant measures
Basic Concepts
Evaluation Methods
Summary
59
Summary
Basic concepts: association rules, support-
confident framework, closed and max-patterns
Scalable frequent pattern mining methods
Apriori (Candidate generation & test)
Projection-based (FPgrowth, CLOSET+, ...)
Vertical format approach (ECLAT,
CHARM, ...)
Which patterns are interesting?
Pattern evaluation methods
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Ref: Basic Concepts of Frequent Pattern Mining
(Association Rules) R. Agrawal, T. Imielinski, and A. Swami. Mining
association rules between sets of items in large databases. SIGMOD'93
(Max-pattern) R. J. Bayardo. Efficiently mining long patterns from
databases. SIGMOD'98
(Closed-pattern) N. Pasquier, Y. Bastide, R. Taouil, and L. Lakhal.
Discovering frequent closed itemsets for association rules. ICDT'99
(Sequential pattern) R. Agrawal and R. Srikant. Mining sequential patterns.
ICDE'95
61
Ref: Apriori and Its Improvements
R. Agrawal and R. Srikant. Fast algorithms for mining association rules.
VLDB'94
H. Mannila, H. Toivonen, and A. I. Verkamo. Efficient algorithms for
discovering association rules. KDD'94
A. Savasere, E. Omiecinski, and S. Navathe. An efficient algorithm for mining
association rules in large databases. VLDB'95
J. S. Park, M. S. Chen, and P. S. Yu. An effective hash-based algorithm for
mining association rules. SIGMOD'95
H. Toivonen. Sampling large databases for association rules. VLDB'96
S. Brin, R. Motwani, J. D. Ullman, and S. Tsur. Dynamic itemset counting and
implication rules for market basket analysis. SIGMOD'97
S. Sarawagi, S. Thomas, and R. Agrawal. Integrating association rule mining
with relational database systems: Alternatives and implications. SIGMOD'98
62
Ref: Depth-First, Projection-Based FP Mining
R. Agarwal, C. Aggarwal, and V. V. V. Prasad. A tree projection algorithm for generation
of frequent itemsets. J. Parallel and Distributed Computing, 2002.
G. Grahne and J. Zhu, Efficiently Using Prefix-Trees in Mining Frequent Itemsets, Proc.
FIMI'03
B. Goethals and M. Zaki. An introduction to workshop on frequent itemset mining
implementations. Proc. ICDM’03 Int. Workshop on Frequent Itemset Mining
Implementations (FIMI’03), Melbourne, FL, Nov. 2003
J. Han, J. Pei, and Y. Yin. Mining frequent patterns without candidate generation.
SIGMOD’ 00
J. Liu, Y. Pan, K. Wang, and J. Han. Mining Frequent Item Sets by Opportunistic
Projection. KDD'02
J. Han, J. Wang, Y. Lu, and P. Tzvetkov. Mining Top-K Frequent Closed Patterns without
Minimum Support. ICDM'02
J. Wang, J. Han, and J. Pei. CLOSET+: Searching for the Best Strategies for Mining
Frequent Closed Itemsets. KDD'03
63
Ref: Vertical Format and Row Enumeration Methods
64
Ref: Mining Correlations and Interesting Rules
S. Brin, R. Motwani, and C. Silverstein. Beyond market basket: Generalizing
association rules to correlations. SIGMOD'97.
M. Klemettinen, H. Mannila, P. Ronkainen, H. Toivonen, and A. I. Verkamo. Finding
interesting rules from large sets of discovered association rules. CIKM'94.
R. J. Hilderman and H. J. Hamilton. Knowledge Discovery and Measures of Interest.
Kluwer Academic, 2001.
C. Silverstein, S. Brin, R. Motwani, and J. Ullman. Scalable techniques for mining
causal structures. VLDB'98.
P.-N. Tan, V. Kumar, and J. Srivastava. Selecting the Right Interestingness Measure
for Association Patterns. KDD'02.
E. Omiecinski. Alternative Interest Measures for Mining Associations. TKDE’03.
T. Wu, Y. Chen, and J. Han, “Re-Examination of Interestingness Measures in Pattern
Mining: A Unified Framework", Data Mining and Knowledge Discovery, 21(3):371-
397, 2010
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