Gene Regulation of Prokaryotic Transcription
Gene Regulation of Prokaryotic Transcription
Gene Regulation of Prokaryotic Transcription
PROKARYOTIC TRANSCRIPTION
Biology Department
Faculty of Mathematics and Natural Sciences
Universitas Brawijaya
Malang
• Prokaryotes are single-
celled organisms that
are the earliest and
most primitive forms of
life on earth.
• Prokaryotic cells lack
organelles found in
eukaryoitic cells such
as mitochondria,
endoplasmic reticuli, Figure 1.
and Golgi complexes. prokaryotic cell
structure
• They have no true
nucleus as the DNA is
not contained within a
membrane or separated
from the rest of the
cell, but is coiled up in
PROKARYOTE GENE STRUCTURE
TRANSCRIPTION
• Transcription is the process
of making RNA from DNA
template.
• Several key factors are
involved in this process,
including DNA, transcription
factors, RNA polymerase,
and ATP.
• Transcription has three
stages: initiation,
elongation, and termination.
ure 2. Promoter and Terminator structure of prokaryote orga
Figure 3.
transcription
mechanism of
prokaryotic
TRANSCRIPTION ACTIVATOR
TRANSCRIPTION REPRESSOR
CASE STUDY
Bacterial Transcription as a
Target for Antibacterial Drug
Development
Cong Ma, Xiao Yang, Peter J. Lewis
• Infections are
still the leading
cause of death
in developing
world
WHO, 2016
• Antibiotic resistance represents a
serious and growing problem in the
treatment of bacterial infections
• Selecting an antibiotic that will
optimally treat an infection while
minimizing adverse effects
• Most clinically approved antibiotics target
:
- bacterial cell wall growth/integrity
- translation
- DNA replication/segregation
• Transcription appears to be an
underutilized target
Antibiotics targeting bacterial RNAP on
the market:
• Rifamycin
• Fidaxomicin/lipiarmicin
Figure 4. RNAP structure and functional motif. (A-B) Side and front views &
(B-C) Enlarged views from panels A and B
RYFAMYCIN
Rifampin (RIF), synthesized
from rifamycin SV, is orally
effective and has broad-
spectrum activity against
Gram-positive, Gram-negative,
and especially mycobacterial
SORANGICIN
pathogens
Sorangicin is a macrocyclic
antibiotic isolated from
Sorangium cellulosum
Figure 5. Antibiotics that bind close to the active site. (A)
Space-filled structure of T. thermophilus RNAP holoenzyme
with core subunits & (B) Rifampin (RIF) (red) and sorangicin
(SOR) (yellow) have overlapping binding sites
THANKYOU