Week 3

STRUCTURE AND FUNCTION
OF CHROMOSOMES
Structure of Chromosome
Chromosomes Exists in Homologous Pairs in Diploid
Organisms
Each chromosome contains a constricted region called the
centromere.
Extending from either side of the centromere are the arms
of the chromosome.
Chromosomes are classified base on the location of the
centromere:
- metacentric,
- sub-metacentric,
- acrocentric,
- telocentric
Centromere location Designation Metaphase Shape
Middle Metacentric
Between middle and Submetacentric

end
Close to end Acrocentric
At end Telocentric
In mitosis, all somatic cells derived from members of the
same species contain an identical number of chromosomes
(diploid number (2n)).
Chromosomes exist in pairs and the members of each pair

are called homologous chromosomes, with the exception
of sex chromosomes.
the physical appearance of different pairs of homologous

chromosomes can be shown on a display called a
karyotype.
Karyotype
The haploid number (n) of chromosomes is equal to one-half
the diploid number.
Collectively, the genetic information contained in a haploid set

of chromosomes constitutes the genome of the species.
Homologous chromosomes have important genetic similarities.

They contain identical gene sites along their lengths; each site is
called a locus (pl. loci).
The members of each pair of genes, while influencing the same

characteristic or trait, need not be identical.
In a population of members of the same species, many different

alternative forms of the same gene, called alleles, can exist.
In many species, one pair, consisting of the sex-
determining chromosomes, is often not homologous in
size, centromere placement, arm ratio, or genetic content.
These X and Y chromosomes are not strictly homologous.

The Y is considerably smaller and lacks most of the gene
loci contained on the X.
Mendelian Genetics
The Monohybrid Cross
Monohybrid cross is Mendels simplest cross which

involves only one pair of contrasting traits.
A monohybrid cross is made by mating true-breeding

individuals from two parent strains, each exhibiting one of
the two contrasting forms of the character under study.
The original parents constitute the P1, or parental

generation; their offspring are the F1, or first filial
generation; the individuals resulting from the selfed F1
generation are the F2, or second filial generation; and so on.
Characte Contrasting trait F1 results F2 results F2 ratio
r
Seed round/wrinkled All round 5474 round 2.96:1

shape 1850 wrinkled
yellow/green All yellow 6022 yellow 3.01:1
Seed color 2001 green
Pod shape full/constricted All full 882 full 2.95:1

299 constricted
Pod color Green/yellow All green 428 green 2.82:1
152 yellow
Flower Violet/white All violet 705 violet 3.15:1
color 224 white
Axial/terminal All axial 651 axial 3.13:1
Flower 207 terminal
position
Stem Tall/dwarf All tall 787 tall 2.84:1
height 277 dwarf
Another aspect of Mendels monohybrid crosses is the
reciprocal crosses, i.e. Mendels monohybrid crosses were
not sex-dependent.
Mendel proposed the existence of particulate unit factors

for each trait. He suggested that these factors serve as the
basic units of heredity and are passed unchanged from
generation to generation, determining various traits
expressed by each individual plant.
Mendels Postulates
Using the consistent pattern of results in the monohybrid
crosses, Mendel derived the following three postulates, or
principles, of inheritance.
1. UNIT FACTORS IN PAIRS

Genetic characters are controlled by unit factors existing
in pairs in individual organisms.
2. DOMINANCE/RECESSIVENESS
When two unlike unit factors responsible for a single
character are present in a single individual, one unit factor
is dominant to the other, which is said to be recessive.
3. SEGREGATION
During the formation of gametes, the paired unit factors
separate, or segregate, randomly so that each gamete
receives one or the other with equal likelihood.
When F1 plants form gametes, the postulate of segregation

demands that each gamete randomly receives either the tall
or dwarf unit factor. Following random fertilization events
during F1 selfing, four F2 combinations will result with
equal frequency:
1. tall/tall
2. tall/dwarf
3. dwarf/tall
4. dwarf/dwarf
Modern Genetic Terminology
The physical expression of a trait is the phenotype of the
individual.
Mendels unit factors represent units of inheritance called

genes by modern geneticists.
For any given character, such as plant height, the

phenotype is determined by alternative forms of a single
gene, called alleles.
The first letter of the recessive trait symbolizes the character in
question; in lowercase italic, it designates the allele for the
recessive trait, and in uppercase italic, it designates the allele for
the dominant trait.
Thus for Mendels pea plants, we use d for the dwarf allele and
D for the tall allele.
When alleles are written in pairs to represent the two unit factors
present in any individual (DD, Dd, or dd), the resulting symbol is
called the genotype.
When both alleles are the same (DD or dd), the individual is
homozygous for the trait, or a homozygote; when the alleles are
different (Dd), we use the terms heterozygous and heterozygote.
Mendels Analytical Approach
Punnett Squares
The genotypes and phenotypes resulting from combining
gametes during fertilization can be easily visualized by
constructing a diagram called a Punnett square.
Each of the possible gametes is assigned a column or a

row; the vertical columns represent those of the female
parent, and the horizontal rows represent those of the male
parent.
Problem:
Pigeons may exhibit a checkered or plain color pattern. In a series of controlled matings,
the following data were obtained.
F1 Progeny
P1 Cross Checkered Plain
(a) checkered * checkered 36 0
(b) checkered * plain 38 0
(c) plain * plain 0 35
Then F1 offspring were selectively mated with the following results. (The P1 cross giving
rise to each F1 pigeon is indicated in parentheses.)
F2 Progeny
F1 * F1 Crosses Checkered Plain
(d) checkered (a) * plain (c) 34 0
(e) checkered (b) * plain (c) 17 14
(f) checkered (b) * checkered (b) 28 9
(g) checkered (a) * checkered (b) 39 0
How are the checkered and plain patterns inherited? Select and assign symbols for the
genes involved, and determine the genotypes of the parents and offspring in each cross.
The Testcross: One Character
Testcross is a simple method that is still used today to
discover the genotype of plants and animals.
The organism expressing the dominant phenotype but

having an unknown genotype is crossed with a known
homozygous recessive individual.
Mendels Dihybrid Cross
Mendel also designed experiments in which he
examined two characters simultaneously.
Such a cross, involving two pairs of contrasting traits,

is a dihybrid cross, or a two-factor cross.
Mendels Fourth Postulate:
Independent Assortment
A dihybrid cross consists of two monohybrid crosses
conducted separately.
The two pairs of contrasting traits are inherited
independently, so we can predict the frequencies of all
possible F2 phenotypes by applying the product law
of probabilities:
When two independent events occur simultaneously,
the probability of the two outcomes occurring in
combination is equal to the product of their individual
probabilities of occurrence.
4. INDEPENDENT ASSORTMENT
During gamete formation, segregating pairs of unit

factors assort in dependently of each other.
The Trihybrid Cross
Mendel demonstrated that the processes of segregation and

independent assortment also apply to three pairs of
contrasting traits, in what is called a trihybrid cross, or
three-factor cross.
The Forked-Line Method,
or Branch Diagram
It is much less difficult to consider each contrasting pair of
traits separately and then to combine these results by using
the forked-line method.
This method, also called a branch diagram, relies on the

simple application of the laws of probability established
for the dihybrid cross.
Each gene pair is assumed to behave independently during

gamete formation.
When the monohybrid cross AA x aa is made, we know that:
1. All F1 individuals have the genotype Aa and express the
phenotype represented by the A allele, which is called
the A phenotype in the discussion that follows.
2. The F2 generation consists of individuals with either the
A phenotype or the a phenotype in the ratio of 3:1.
The same generalizations can be made for the BB x bb and

CC x cc crosses. Thus, in the F2 generation, 3/4 of all
organisms will express phenotype A, 3/4 will express B, and
3/4 will express C. Similarly, 1/4 of all organisms will
express a, 1/4 will express b, and 1/4 will express c.
Figure 3.9
In crosses involving two or more gene pairs, the
calculation of gametes genotypic and phenotypic involves
several simple mathematical rules.
First, you must determine the number of different

heterozygous gene pairs (n) involved in the crossfor
example, where AaBb * AaBb represents the cross, n = 2;
for AaBbCc * AaBcCc, n = 3; for AaBBCcDd *
AaBBCcDd, n = 3 (because the B genes are not
heterozygous).
Once n is determined;
2n is the number of different gametes that can be formed
by each parent;
3n is the number of different genotypes that result

following fertilization; and
2n is the number of different phenotypes that are produced

from these genotypes.
Crosses between Organisms Heterozygous for Genes
Exhibiting Independent Assortment
Number of Number of Number of Number of
Heterozygous Different Types of Different Different
Gene Pairs Gametes Formed Genotypes Phenotypes
Produced Produced*
n 2n 3n 2n
1 2 3 2
2 4 9 4
3 8 27 8
4 16 81 16
Problem:
Considering the Mendelian traits round versus wrinkled and
yellow versus green, consider the crosses below and determine
the genotypes of the parental plants by analyzing the phenotypes
of their offspring.
round, yellow * 9/16 round, yellow

round, yellow 3/16 round, green
3/16 wrinkled, yellow
1/16 wrinkled, green

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STRUCTURE AND FUNCTION

Between middle and Submetacentric

Close to end Acrocentric

Chromosomes exist in pairs and the members of each pair

the physical appearance of different pairs of homologous

Collectively, the genetic information contained in a haploid set

Homologous chromosomes have important genetic similarities.

The members of each pair of genes, while influencing the same

In a population of members of the same species, many different

These X and Y chromosomes are not strictly homologous.

Monohybrid cross is Mendels simplest cross which

A monohybrid cross is made by mating true-breeding

The original parents constitute the P1, or parental

Seed round/wrinkled All round 5474 round 2.96:1

Pod shape full/constricted All full 882 full 2.95:1

Mendel proposed the existence of particulate unit factors

1. UNIT FACTORS IN PAIRS

When F1 plants form gametes, the postulate of segregation

Mendels unit factors represent units of inheritance called

For any given character, such as plant height, the

Each of the possible gametes is assigned a column or a

The organism expressing the dominant phenotype but

Such a cross, involving two pairs of contrasting traits,

During gamete formation, segregating pairs of unit

Mendel demonstrated that the processes of segregation and

This method, also called a branch diagram, relies on the

Each gene pair is assumed to behave independently during

The same generalizations can be made for the BB x bb and

First, you must determine the number of different

3n is the number of different genotypes that result

2n is the number of different phenotypes that are produced

round, yellow * 9/16 round, yellow

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