Study On Gene Therapy
Study On Gene Therapy
Study On Gene Therapy
by
ANURAG JOSHUA
04 BiPC
DEPARTMENT OF BIOLOGY
MOUNT CARMEL GLOBAL SCHOOL
HYDERABAD
2023-2024
APPENDIX 2
BONAFIDE CERTIFICATE
Signature
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APPENDIX 3
Declaration by Author
This is to declare that this report has been written by me. No part of the
report is plagiarized from other sources. All information included from other
sources have been duly acknowledged. I aver that if any part of the report is
found to be plagiarized, I shall take full responsibility for it.
Signature
Anurag Joshua
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Place
Date
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APPENDIX 4
(A typical specimen of table of contents)
TABLE OF CONTENTS
1. ABSTRACT
2. INTRODUCTION
7. VIRAL VECTORS
9. FUNCTIONAL CLASSIFICATION
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14. CHALLENGES
16. CONCLUSION
17. REFERENCES
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ABSTRACT
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INTRODUCTION
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HISTORY AND DEVELOPMENT OF GENE THERAPY
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TYPES OF GENE THERAPY
Therapeutic genes transferred into the germ cells. It is heritable and passed
on to later generations. Result in permanent changes. Potential for offering
a permanent therapeutic effect for all who inherit the target gene. Possibility
of eliminating some diseases from a particular family.
E.g. Genes introduced into eggs and sperms.
Therapeutic genes transferred into the somatic cells. Affects only the target
cells in the patient, and is not passed to future generations. Short-lived
because the cells of most tissues ultimately die and are replaced by new
cells. Transporting the gene to the target cells or tissue is also problematic.
E.g. Introduction of genes into bone marrow cells, blood cells, skin cells,
etc.
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VIRAL VECTORS
• Activates the gene that was shut down during fetal life.
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FUNCTIONAL CLASSIFICATION
GENETIC DISORDERS
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So, if a flawed gene caused our “broken window”, can we “fix” it? What are
our options?
1. Stay silent: ignore the genetic disorder and nothing gets fixed.
3. Put in a normal, functional copy of the gene: if you can do this, it may
solve the problem!
3. To design the best possible approach, knowledge about how the gene
factors into the disorder is required.
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For example:
Which tissues are affected?
What roles foes the protein encoded by the gene play within the cells
of that tissue?
Exactly how do mutations in the gene affect the protein’s function?
4. Adding a normal copy of the gene should fix the problem in the
affected tissue. This may seem like obvious, but it’s not. What if the
mutated gene encodes a protein that prevents the normal protein from
doing it’s job? Mutated genes that function this way are called
dominant negative and adding back the normal protein won’t fix the
problem.
The first step is to find and isolate the gene that will be inserted into the
genetically modified organism. Finding the right gene to insert usually
draws on years of scientific research into the identity and function of
useful genes. Once that is known the DNA needs to be cut at specific
locations to isolate the gene of interest. This can be done by using
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restriction enzyme also known as molecular scissors which cut DNA at
specific sites containing palindromic DNA sequences. But in order to cut
the DNA with restriction enzymes, it needs to be in pure form, free from
other macro-molecules.
Isolation of DNA
Since the DNA is enclosed within the membranes, we have to break the
cell open to release DNA along with other macromolecules such as RNA,
proteins, polysaccharides and also lipids. This can be achieved by
treating the bacterial cells/plant or animal tissue with enzymes such as
lysozyme (bacteria), cellulase (plant cells), chitinase (fungus). Genes are
located on long molecules of DNA intertwined with proteins such as
histones. The RNA can be removed by treatment with ribonuclease
whereas proteins can be removed by treatment with protease. Other
molecules can be removed by appropriate treatments and purified DNA
ultimately precipitates out after the addition of chilled ethanol. This can
be seen as collection of fine threads in the suspension.
Cutting of DNA
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DNA) of interest is synthesised in vitro using two sets of primers (small
chemically synthesised oligonucleotides that are complementary to the
regions of DNA) and the enzyme DNA polymerase. The enzyme extends
the primers using the nucleotides provided in the reaction and the
genomic DNA as template. If the process of replication of DNA is
repeated many times, the segment of DNA can be amplified to
approximately billion times, i.e., 1 billion copies are made.
GENE TARGETING
Gene delivery is one of the biggest challenges in the field of gene therapy.
3. INTEGRATING the gene in the cells. The gene must stay put and
continue working in the target cells. If so, it must be ensured that
the gene integrates into, or becomes part of the host cell’s genetic
material, or that the gene finds another way to survive in the
nucleus without being rejected.
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Choosing The Best Vector
There is no “perfect vector” that can treat every disorder. Like any type of
medical treatment, a gene therapy vector must be customized to address the
unique features of the disorder. We have learnt the lesson, of transferring
genes into plants and animals from bacteria and viruses, which have known
this for ages - how to deliver genes to transform eukaryotic cells and force
them to do what the bacteria or viruses want.
Part of the challenge in gene therapy is choosing the most suitable vector
for treating the disorder. Some vectors commonly used are:
Viruses
-They can be modified so that they can’t replicate and destroy the
cell.
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General Drawbacks of Viral Vectors:
Non-Viral Vectors
Scientists use bacteria and plasmids to easily and efficiently store and
replicate genes of interest from any organism.
Vectors used at present, are engineered is such a way that they help easy
linking of foreign DNA and selection of recombinants from non-
recombinants.
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These are not the only way to introduce alien DNA into host cells. In a
method known as micro-injection, recombinant DNA is directly
injected into the nucleus of an animal cell. In another method, suitable
for plants, cells are bombarded with high velocity micro-particles of
golf or tungsten coated with DNA in a method known as biolistics or
gene gun.
Cystic Fibrosis
Cystic Fibrosis (CF), also known as mucoviscidosis, is an autosomal
recessive genetic disorder that affects most critically the lungs, and also
the pancreas, liver, and intestine. It is characterised by abnormal
transport of chloride and sodium across an epithelium, leading to thick,
viscous secretions, preventing the cilia from clearing debris which
cause symptoms such as coughing, poor digestion and increased
vulnerability to infection.
CF is caused by a mutation in the gene for the protein cystic fibrosis
transmembrane conductance regulator (CFTR) gene on chromosome 7.
Most commonly, the mutation in the CFTR gene is a three-base-pair
deletion. This protein is required to regulate the components of sweat,
digestive fluids, and mucus. CFTR regulates the movement of chloride
and sodium ions across epithelial membranes, such as the alveolar
epithelial located in the lungs. Since all of the cells of a CF patient have
the defective protein, large quantities of thick, sticky mucus build up
throughout the lungs and other organs. This results in the severity of
symptoms seen in CF patients.
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SUCCESS CASES OF GENE THERAPY
How It Works?
Used harmless viruses
Enable access to the cells beneath the retinas of patients.
By using a very fine needle – safe in an extremely fragile tissue and
can improve vision in a condition previously considered wholly
untreatable.
How It Works?
Done with local anesthesia, used a harmless, inactive virus [AAV-2
GAD]
Deliver the GAD gene into the patient’s subthalamic nucleus.
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The gene instructs cells to begin making GABA neurotransmitters to
re-establish the normal chemical balance that becomes dysfunctional
as the diseases progresses.
ADVANTAGES
DISADVANTAGES
CHALLENGES
Some of the factors that have kept gene therapy from becoming an
effective treatment for genetic diseases are:
Immune response -
Anytime a foreign body is introduced into human tissues, the immune
system is designed to attack the invader. The risk of stimulating the
immune system in a way that reduces gene therapy effectiveness is
always a potential risk. Furthermore, the immune system enhanced
response to invaders it has seen before makes it difficult for gene therapy
to be repeated in patients.
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Problems with viral vectors -
Viruses, while the carrier of choice in most gene therapy studies, present
a variety of potential problems to the patient – toxicity, immune and
inflammatory responses, and gene control and targeting issues. In
addition, there is always the fear that the viral vector, once inside the
patient, may recover its ability to cause disease.
Multigene disorders -
Conditions or disorders that arise from mutations in the single gene are
the best candidates for gene therapy. Unfortunately, some of the most
commonly occurring disorders, such as heart disease, high blood
pressure, Alzheimer’s disease, arthritis, and diabetes are caused by the
combined effects of variations in many genes. Multigene or
multifractional disorders such as these would be especially difficult to
treat effectively using gene therapy.
RECENT UPCOMING
CRISPR
CRISPR stands for Clustered Regularly Interspaced Short Palindromic
Repeats. These RNA sequences serve an immune function in
archaebacteria, but in the last year or so, scientists have seized upon them
to rewrite genes. The RNA sequence serves as a guide to target a DNA
sequence in, say, a zygote or a stem cell. The guide sequence leads an
enzyme, Cas9, to the DNA of interest. Cas9 can cut the double strand,
nick it, or even knock down gene expression. After Cas9 injuries the
DNA, repair systems fix the sequence or new sequences can be inserted.
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It isn’t the first or only method of gene repair therapy that’s been
developed, but the CRISPR technology, says Ramesar, is so special
because, unlike previous methods which were more laborious and could
only target one kind of cell in the body, it appears to be a “one size fits
all delivery”, adaptable for different tissues. The procedure also seems
relatively simple to perform.
Exciting as the development may be, CRISPR won’t be delivering instant
cures just yet.
Ramesar says, from his initial impressions of the literature, that it would
seem that localised, accessible abnormal tissue (as in the retina or skin)
could be targeted more easily.
Conditions affecting the body more systemically, however, such as
certain developmental syndromes, or central nervous system disorders,
might be problematic in terms of getting the repair technology into
enough of the target cells in that tissue to make an effective difference.
CONCLUSION
Although early clinical failures led many to dismiss gene therapy as over-
hyped, clinical successes since 2006 have bolstered new optimism in the
promise of gene therapy. These include successful treatment of patients
with the retinal disease Leber’s congenital amaurosis, X-linked SCID,
ADA-SCID, adrenoleukodystrophy, chronic lymphocytic leukaemia
(CLL), acute lymphocytic leukaemia (ALL), multiple myeloma,
haemophilia and Parkinson’s disease. These recent clinical success have
led to a renewed interest in gene therapy, with several articles in scientific
and popular publications calling for continued investment in the field.
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REFERENCES
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