DNA - RNA Nice Material
DNA - RNA Nice Material
DNA - RNA Nice Material
Biology 137
Chapter 12
12/1/11-12/15/11
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Homework
DNA Study Sheets (pkt. p. 11-12)
Friday, Dec. 2nd Review/Check Homework
DNA Structure Review
Replication Notes
Practice Replication Worksheets (pkt. p. 19-20)
Homework
Complete Replication Worksheets (pkt. p. 19-20)
Read Section 12.2 (textbook pages 295-299)
Complete 2CN (pkt. p. 15-18)
Monday, Dec. 5th Review/Check Homework
Review for Quiz – Webquest Part I (pkt. p. 21-22)
Quiz on DNA Structure and Replication
DNA vs RNA Venn Diagram (pkt. 23)
RNA and Transcription PPT
DNA Replication and Transcription Worksheets (pkt. p. 25-26)
Homework
Finish DNA Replication and Transcription Worksheets (pkt. p.25-26)
Transcription Worksheets (pkt. p. 27)
Tuesday, Dec.6th Go over DNA Structure and Replication Quiz
DNA and RNA Lab
Homework
Finish Lab Analysis Questions
Study for Transcription Quiz
Wednesday, Dec. 7th Turn in DNA and RNA Lab
Transcription Quiz
PPT Translation
Begin Homework
Homework
Read Section 12.3 (textbook pages 300-306)
Complete 2CN (pkt. p. 33-36) – due Friday
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Homework
Read Section 12.3 (textbook pages 300-306)
Complete 2CN (pkt. p. 33-36) – due Friday
Friday, Dec. 9th Turn in 2CN
Finish tRNA and Protein Building Lab
Model Protein Synthesis Practice Problem
Protein Synthesis Practice Problems (pkt. p. 41-42)
Homework
Finish Protein Synthesis Practice Problems (pkt. p. 41-42)
Monday, Dec. 12th Review/Check Homework
Protein Synthesis Relay (pkt. p. 45)
Homework
Study for Translation Quiz
Tuesday, Dec. 13th Translation Quiz
Complete Unit Objectives (pkt. p. 5)
- Answers need to be written on a separate sheet of paper
Homework
Finish your Unit Objectives
Wednesday, Dec. 14th Review for Unit Test
Homework
Study for DNA, RNA, and Protein Synthesis Test
Thursday, Dec. 15th Unit Test on DNA, RNA and Protein Synthesis
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Biology S137 Name_______________________________________
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Learning Targets- students will be able to show mastery of identified Critical Learning Standard through the
following:
1. I can explain the structure of DNA.
2. I can describe the steps of DNA replication and I understand the purpose.
3. I can identify the differences between DNA and RNA, as well as their purposes.
4. I can explain the process of protein synthesis.
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Biology S137 Name_______________________________________
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UNIT OBJECTIVES
The following objectives are a guide to what you should know and understand by the end of this unit.
nucleotide codon
chromatin RNA
DNA polymerase translation
messenger RNA anticodon
base complementary bases
replication amino acid
RNA polymerase gene
transfer RNA double helix
DNA protein
transcription
4. Use a diagram and words to describe how DNA nucleotides join to form a section of a DNA molecule.
6. Explain why each different organism has a different sequence of nucleotides in its DNA.
7. Describe the process of DNA replication. Explain both when and where it occurs in the cell. Use
diagrams to illustrate your explanation.
8. Explain the process of transcription of DNA into messenger RNA. Use diagrams to illustrate your
explanation.
9. Compare and contrast DNA and RNA (How are they alike? How are they different?).
10. Compare and contrast replication and transcription (How are they alike? How are they different?) .
11. Describe the process of translation of mRNA into a protein. Include the role of the ribosome, codons,
anticodons, and tRNA in your explanation. Use diagrams to illustrate your explanation.
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DNA MODELING PROJECT
INTRODUCTION: In April of 1953, two men, James Watson and Francis Crick, published the
structure of the DNA molecule, and won the Nobel prize. Their discovery revolutionized the
way we think about biology. We are only now beginning to realize the great impact their
discovery is having on our understanding of living things.
Since their discovery involved the creation of models, I thought it would be appropriate to
do a little modeling of our own. In that vein, you will create your own model of the DNA
molecule. Read on to find out how.
MODEL REQUIREMENTS
3. It must be free-standing.
5. Base Pairs: Your model should contain at least 15 base pairs, but no more than 30 base pairs.
Bases, sugars, and phosphates should be clearly evident and labeled so they may be easily
identified. If letter designations are used, a key must be provided.
6. Dimensions: The helix should be built to scale according to accepted width and base-pair
spacing and distances.
7. Materials: Paper, card stock, cardboard or other easily worked materials can be used for
the rungs of the ladder. Wire and/or wood can be used to support the structure.
8. Detail: The amount of detail you wish to include, above and beyond the requirements, is up
to you. Extra detail may earn you bonus points.
9. A written explanation of the structure of DNA must be included with the structure.
Just think, if you could have created your model 54 years ago, you would
have won the Nobel Prize – and about a million bucks!
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Model is freestanding 2
Comments:
2. Try to piece them together, sort of like a puzzle. You have 2 minutes.
3. Below, make a small scale drawing of how you and your teammate have arranged
the pieces.
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P S
B P BS P S
B P S
B P S
B P S
B P
5. What are the sides made of?
B B B B B B
P S P S P S P S P S P S P
6. What are the rungs made of?
You know that each rung is made of two bases, but it’s a little more complicated than that.
There are four possible bases that can make up a rung. They are Adenine, Thymine, Cytosine,
and Guanine. They are almost always known by the first letter of their name – A, T , C, G.
Here’s the important part. You know that it takes two bases to make a rung. The base always
pair up like this:
A and T (or) C and G
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Chapter 12.2 Pages 295 to 299
Section or Chapter Title: ______________________
During-Reading:
Key Ideas and Section Heading Supporting Details (use graphics & pictures as well as text) –
pictures should have meaningful color used
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Key Ideas and Section Heading Supporting Details (use graphics & pictures as well as text) –
pictures should have meaningful color used
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Vocabulary Word Definition (in your own words) Picture (with meaningful color
used)
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After Reading: Summarizing
Write a FOUR sentence summary about the reading:
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Biology S137 Name_______________________________________
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DNA Replication
I have summarized the three steps in DNA replication below. Use this information as well as the
information gathered in your notes to answer the questions that follow.
STEP 1: The double helix unzips (with helicase) down the middle as base pairs separate.
STEP 2: DNA polymerase adds the correct complimentary nucleotide to each exposed strand.
STEP 3: A complimentary strand is created for each original strand in the double helix.
Questions:
1. Fill in the correct complimentary base for each of the following bases found in DNA.
Complimentary Base
a. guanine ________________
b. adenine ________________
c. thymine ________________
d. cytosine ________________
2. Which of the four bases above are purines? Look in your text book for a picture of the bases. Purines
are single ringed structures.
____________________________________________________________________________________
____________________________________________________________________________________
3. Which of the four bases above are pyrimidines? Look in your text book for a picture of the bases.
Pyrimidines are double ringed structures.
____________________________________________________________________________________
____________________________________________________________________________________
4. Draw a picture of the result of each step of DNA replication below. I have given you the sequence of
one strand of DNA in the first box. Begin by filling in the complimentary bases for the second strand in
the box.
C-
G-
G-
T-
A-
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Biology S137 Name_______________________________________
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DNA Replication
Replicate the following DNA molecules. Use a different color pens (or pencils) to show the difference
between the original and new strands of DNA.
1. -AT-
-CG-
-CG-
-GC-
-AT-
-TA-
2. -CG-
-CG-
-GC-
-AT-
-AT-
-TA-
3. -TA-
-TA-
-CG-
-GC-
-CG-
-AT-
4. -TA-
-GC-
-AT-
-CG-
-TA-
-CG-
5. -CG-
-TA-
-GC-
-TA-
-AT-
-CG-
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4. Describe what you end up with after you finish the activity.
7. What are the three bases in mRNA that are the SAME as in DNA?
9. How many strands does each type of molecule have? DNA _____ RNA____
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13. Three mRNA bases come together to form codons. What are the matching sets of tRNA called?
_______________
14. Besides anticodons, what else is attached to the tRNA? (Hint: The pieces that make up proteins.)
15. List the amino acids in the protein that you just formed:
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Venn Diagram to Compare DNA to RNA
RNA
DNA
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1. Below are some DNA molecules that are missing the right-hand strand. Complete the
molecule by writing in the missing strand.
a. b. c.
A- C- G-
T- T- C-
G- A- T-
C- A- T-
A- C- G-
G- T- A-
C- G- A-
T- C- C-
2. Below are some DNA molecules composed of both a left and right strand. Draw the two
DNA molecules that would be produced by replication. Label the old and new strand of each
molecule.
a. b.
G-C C-G
T-A G-C
C-G T-A
A-T A-T
T-A T-A
C-G G-C
T-A T-A
G-C C-G
T-A A-T
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3. Examine the DNA molecule below. Some of the bases are incorrectly paired. Circle the
pairs that are incorrect.
a. B. C.
C-G G-G A-G
A-C A-T A-T
T-A T-T U-A
G-C C-G T-T
C-C A-T A-T
G-A C-G G-C
C-G T-A C-G
A-T A-A A-T
A-T G-C G-U
4. Below are some DNA molecules. Draw the messenger RNA molecule that would be produced
from the left-hand strand of each DNA molecule. Remember, don’t T’s your RNA’s!
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Biology S137 Name_______________________________________
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DNA Transcription
2.
-CG-
-AT-
-TA-
-TA-
-CG-
-GC-
3.
-CG-
-GC-
-AT-
-TA-
-TA-
-CG-
4.
-CG-
-AT-
-AT-
-TA-
-CG-
-GC-
5.
-C G-
-T A-
-G C-
-T A-
-A T-
-C G-
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Chapter 12.3 Pages 300 to 306
Section or Chapter Title: ______________________
During-Reading:
Key Ideas and Section Heading Supporting Details (use graphics & pictures as well as text) –
pictures should have meaningful color used
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Biology S137 Name_______________________________________
Andrianopoulos/Friel/McHugh/McCloud/Shoub Date _______________ Per. 1 2 3 4 5 6 7 8
Key Ideas and Section Heading Supporting Details (use graphics & pictures as well as text) –
pictures should have meaningful color used
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Biology S137 Name_______________________________________
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Vocabulary Word Definition (in your own words) Picture (with meaningful color
used)
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Biology S137 Name_______________________________________
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After Reading: Summarizing
Write a FOUR sentence summary about the reading:
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Biology S137 Name_______________________________________
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mRNA Codon Wheel
1. The first codon in an mRNA is always AUG. What amino acid does it
code for? __________.
2. Stop codons end the translation of each proton. List the three stop
codons:
_______, _______, _______
3. How many different codons are possible with 4 bases and codons
composed of three bases each? (Hint: Count the codons).
4. What's the point in having several codons for the same amino acid?
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Biology S137 Name_______________________________________
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1. Given the following strand of a DNA molecule, construct the complimentary strand.
STRAND 1 GCAACGGTT
STRAND 2 _ _ _ _ _ _ _ _ _
2. Using STRAND 1 above, create the mRNA molecule that would result from transcription.
DNA STRAND 1 GCAACGGTT
mRNA: _ _ _ _ _ _ _ _ _
3. Use your mRNA codon chart to determine the order of amino acids that result in the protein
coded for by the DNA molecule. USE YOUR mRNA STRAND ONLY!
4. Now list the corresponding tRNA molecules that transfer the amino acids:
PROBLEM 1:
DNA STRAND 1 = T C T G T T G T T
DNA STRAND 2 =
mRNA =
tRNA =
PROBLEM 2:
DNA STRAND 1 = G C A A C A A A T
DNA STRAND 2 =
mRNA =
tRNA =
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Biology S137 Name_______________________________________
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PROBLEM 3:
DNA STRAND 1 = T C T T T A C A T
DNA STRAND 2 =
mRNA =
tRNA =
PROBLEM 4:
DNA STRAND 1 = C A T A A T T C T
DNA STRAND 2 =
mRNA =
tRNA =
PROBLEM 5:
DNA STRAND 1 = G C A A A T C G A
DNA STRAND 2 =
mRNA =
tRNA =
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Protein Sentences: Write down the DNA template number and finished protein
sentence.
A._____
B._____
C._____
D._____
E._____
F._____
G._____
H._____
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SECRET MESSAGE DECODER
Write a message, in double-stranded, DNA code, in the space below. The upper half of
the DNA molecule should contain your “secret” message. Transcribe it into mRNA using
the decoder table below. Fill in the tRNA codes too. Then, write your coded DNA
message on a strip of paper and give it to a friend. See if they can decode it correctly.
mRNA
tRNA
mRNA Codons
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Biology S137 Name_______________________________________
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O.K., Movie Critic, it’s time to watch the video and provide the viewing “public” with a hard-
hitting, in-depth review. Your review should give the major details of the video. Last, write a
brief summary. As always, reviews should be balanced and not biased in favor or against the
video.
VIDEO’S TITLE: Bill Nye the Science Guy: Genes VC572.2.86 24 min.
1. _________________________________________________________________
2. _________________________________________________________________
3. _________________________________________________________________
4. _________________________________________________________________
5. _________________________________________________________________
6. _________________________________________________________________
7. _________________________________________________________________
8. _________________________________________________________________
9. _________________________________________________________________
10. ________________________________________________________________
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The purpose of this experiment is to isolate or extract DNA from your own cheek
cells. Extracting DNA is very often the first step that a molecular biologist performs on the way to more
complex manipulations of DNA.
Materials:
o Gatorade or 0.9% salt solution
o 25% Suave shampoo or detergent solution
o Ice-cold 95% ethanol (ethyl alcohol)
o Water
o 10 mL graduated cylinder
o Dixie Cups
o Capillary pipette or toothpick for spooling DNA
o 50 mL beakers or paper cups
2. Rinse your mouth with the Gatorade or NaCl solution for 30-60 seconds.
3. Spit out the NaCl solution, now containing cheek cells,back into the 50 mL beaker or cup.
Swishing the solution in your mouth causes cheek cells to get scraped off your cheek into the solution. The
positively-charged sodium ions (Na+) are attracted to the negative charge of the DNA. This creates a “shield”
around the DNA molecules and causes them to stick together (coalesce). This enables the DNA to precipitate
out of the solution when alcohol is added in a later step.
The lipid bilayer of the cell membrane and nuclear membrane are broken down by detergents. (FYI: When
you wash dishes, the fats/grease are removed from you dishes by the dish soap.)
2. Mix well by gently swirling the contents in the Dixie cup. You Do Not Want Bubbles to Form!
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Biology S137 Name_______________________________________
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3. Half-fill a test tube with your cheek cell and soap solution.
4. Carefully layer 5-10 mL of ethanol on to of the suspension of dissolved cells by allowing the ethanol to drip
slowly down the side of the beaker. A distinct layer of ethanol should be observed on top of the detergent and
cell mixture.
DNA molecules are soluble in water but not in alcohol solution. When the DNA from your cheek cells
comes in contact with alcohol, the long, stringy DNA molecules precipitate into the alcohol.
5. Move a glass rod or stick through the ethanol into the cell suspension and rest it on the bottom of the beaker.
Gently stir and roll the glass rod between your fingers, but do not mix the layers.
6. Carefully and slowly pull out the glass rod. You should be able to see a white, stringy material clinging to the
glass rod. What you see is thousands of your DNA molecules stuck together!
CONGRATULATIONS!
a. Swishing
b. Detergent
c. Salt
3. Explain why scientists might need to extract DNA from a person or object/
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