Computational and Theoretical Chemistry: Sciencedirect
Computational and Theoretical Chemistry: Sciencedirect
Computational and Theoretical Chemistry: Sciencedirect
a
Department of Chemistry, Geethanjali College of Engineering and Technology, Cheeryal 501301, India
b
Department of Pharmacy, School of Health Science, University of Kwazulu Natal, Durban, South Africa
c
Department of Chemistry, Osmania University, Hyderabad 500007, India
Keywords: It is well known that benzoic acid distributes itself between chloroform and water. The partition coefficients (Kp)
Density functional Theory of seven different benzoic acids in chloroform/water are documented in the literature. Plausible hydrogen
Hydrogen bond bonded structures of these seven benzoic acids with the two immiscible solvents were envisaged and the DFT
Hammett equation and partition coefficients calculation for these hydrogen bonds were carried out. Further, the conformity of Hammett relation to the
hydrogen bond interactions was assessed. Application of Hammett equation to the hydrogen bonding of dis
tribution of different para-substituted benzoic acids to these immiscible solvents is done for the first time.
Further, an explanation for non-linear plot of partition coefficients logKp of para-substituted benzoic acids in
chloroform-water system versus Hammett σ value has been explained for the first time.
⁎
Corresponding authors.
E-mail addresses: [email protected] (S. Rachuru), [email protected] (A.A. Skelton), [email protected] (J. Vandanapu).
https://doi.org/10.1016/j.comptc.2020.113024
Received 19 March 2020; Received in revised form 15 August 2020; Accepted 1 September 2020
Available online 04 September 2020
2210-271X/ © 2020 Elsevier B.V. All rights reserved.
S. Rachuru, et al. Computational and Theoretical Chemistry 1190 (2020) 113024
Scheme 1. Depicting the plausible hydrogen bonds between solute and solvent.
The entire curve fittings were done by KaleidaGraph software ver sum of the energies of p-chloro-benzoic acid and water was subtracted
sion 4.1 supplied by Synergy Software INC., Reading, PA, USA.Gaussian to get the hydrogen bond interaction energy that is
(R) 09 program was used for the quantum mechanical calculations. −956.86601772- (-880.41383673–76.44033589) = −0.011841
Density Functional Theory (DFT), using WB97XD functional [33] with hartree which is −7.432906856 kcal/mol or −7.432 kcal/mol. The
6–311 + g(d,p) basis set was utilized for all calculations. The reason for same, if expressed as hydrogen bond interaction between two fragments
employing this functional WB97XD is its ability to treat dispersion in say i and j, it can be written as
teractions [34,35]. To understand how the hydrogen bonds were EHB(i , j) = E(i, j) {E (i) + E(j)} (1)
computed between benzoic acid and the solvents water or chloroform,
let us consider structure IV with chloro substituent. First para-chloro where EHB (i, j) is the hydrogen bond between i and j, E(i, j) is the total
benzoic acid in water (solvent water taken implicitly) was optimized energy of hydrogen bonded structure (such as Fig. 1), E (i) is the energy
using WB97XD functional with 6–311 + g(d,p) basis set. The energy of i fragment and E (j) is the energy of j fragment.
turned out to be −880.41383673 hartree. Then water was optimized The preceding example is determination of hydrogen bonds when
using the same functional and basis set. The energy turned out to be there are two fragments (Fig. 1). If there are three fragments (say i, j
−76.44033589 hartree. In similar manner structure IV was optimized and k), analogous to Fig. 6 and if one has to determine the hydrogen
and the energy was −956.86601772 hartree. Fig. 1 shows the output bond interaction energy between the solvent and COOH group of
Gauss view of structure IV. Then, from the energy of structure IV, the benzoic acid (given in Table 4), one can comprehend with the help of
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S. Rachuru, et al. Computational and Theoretical Chemistry 1190 (2020) 113024
Table 1
Quantum mechanical calculations of Hydrogen bond interactions.
Substituent on benzoic acid Hammett σ Kp(a) Hydrogen bond interaction energies (kcal/mol) of
CHCl3/H2O
Structure I Structure II Structure III with CCl4 Structure IV Structure V Structure VI with H2O
with CCl4 with CCl4 with H2O with H2O
a
from reference [29]
b
calculated from the solubility data (O'Neil, M.J. (ed.). The Merck Index - An Encyclopedia of Chemicals, Drugs, and Biologicals. Whitehouse Station, NJ: Merck and Co.,
Inc., 2006., p. 1140, Opgrande J L et al; Benzoic acid. Kirk-Othmer Encyclopedia of Chemical Technology. (1999–2013). New York, NY: John Wiley & Sons., Bradley J-C,
Neylon C, Guha R, Williams A, Hooker B, Lang A, Friesen Brent J, Bohinski T, Bulger D, Federici M, Hale J, Mancinelli J, Mirza K B, Moritz M, Rein D, Tchakounte C,
and Truong H. Solubilities of Organic Compounds in Organic Solvents: Open Notebook Science Challenge: Available from Nature Proceedings < https://doi.org/10.
1038/npre.2010.4243.3 > (2010).
Table 2
Hydrogen bond Interaction energy between chloroform and para substituent at
benzoic acid.
S.No: Substituent at para position in Interaction energy of chloroform with
benzoic acid. substituent in kcal/mol
1 OH −5.035
2 OCH3 −5.808
3 Cl* −5.958
4 Br −5.164
5 NO2 −5.346
* Chloroform is interacting with ring and not forming Hydrogen bond with
substituent Cl (Fig. 4).
Table 3
Hydrogen bond Interaction energy between water and para substituent at
Fig. 2. Hydrogen bond between chloroform and hydroxyl substituent in benzoic acid.
chloroform layer.
S.No: Substituent at para position in Interaction energy of water with
benzoic acid. substituent in kcal/mol
1 OH −3.579
2 OCH3 −3.994
3 Cl* −2.368
4 Br* −2.404
5 NO2 −3.023
* Water is interacting with ring and not forming Hydrogen bond with sub
stituent Cl atom or Br atom (Fig. 5).
3. Discussion
Here E=(i, jk) is the hydrogen bond interaction between i and jk, E The Hammett equation can also be written as
(ijk) is the total energy of ijk (analogous to Fig. 6), E(jk) total energy of log K / K o = (4)
two hydrogen bonded fragments (say hydrogen bond between para
substituent attached to benzoic acid and solvent) and E(i) is the energy where K and Ko are equilibrium constants for substituted and
3
S. Rachuru, et al. Computational and Theoretical Chemistry 1190 (2020) 113024
Table 4
Hydrogen bond interaction energies (of Scheme 1) in presence of substituent forming Hydrogen bonds with CCl4 and H2O kcal/mol.
Substituent Structure 1H-bond with Structure 2H-bond with Structure 3H-bond with Structure 4H-bond Structure 5H-bond Structure 6H-bond with
chloroform chloroform chloroform with water with water water
* solvent interacting with ring instead of forming H-bond with substituent (eg: Fig. 7).
4
S. Rachuru, et al. Computational and Theoretical Chemistry 1190 (2020) 113024
Plot 1. H-bond energies of structure I versus Hammett sigma. Plot 3. H-bond energies of structure III versus Hammett sigma.
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S. Rachuru, et al. Computational and Theoretical Chemistry 1190 (2020) 113024
4. Conclusion
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S. Rachuru, et al. Computational and Theoretical Chemistry 1190 (2020) 113024
Table 5
Hydrogen bond interaction energies after subtraction that is values from Table 4 minus corresponding values from Table 1 in kcal/mol.
Substituent Structure 1in CCl4 Structure 2 in CCl4 Structure 3 in CCl4 Structure 4 in H2O Structure 5 in H2O Structure 6 in H2O