MACHINE LEARNING

LABORATORY
MANUAL
Machine learning
Machine learning is a subset of artificial intelligence in the field of computer science that often
uses statistical techniques to give computers the ability to "learn" (i.e., progressively improve
performance on a specific task) with data, without being explicitly programmed. In the past
decade, machine learning has given us self-driving cars, practical speech recognition, effective
web search, and a vastly improved understanding of the human genome.

Machine learning tasks

Machine learning tasks are typically classified into two broad categories, depending on whether
there is a learning "signal" or "feedback" available to a learning system:

Supervised learning: The computer is presented with example inputs and their desired outputs,
given by a "teacher", and the goal is to learn a general rule that maps inputs to outputs. As
special cases, the input signal can be only partially available, or restricted to special feedback:

Semi-supervised learning: the computer is given only an incomplete training signal: a training
set with some (often many) of the target outputs missing.

Active learning: the computer can only obtain training labels for a limited set of instances (based
on a budget), and also has to optimize its choice of objects to acquire labels for. When used
interactively, these can be presented to the user for labeling.

Reinforcement learning: training data (in form of rewards and punishments) is given only as
feedback to the program's actions in a dynamic environment, such as driving a vehicle or playing
a game against an opponent.

Unsupervised learning: No labels are given to the learning algorithm, leaving it on its own to
find structure in its input. Unsupervised learning can be a goal in itself (discovering hidden
patterns in data) or a means towards an end (feature learning).

Supervised learning Un Supervised learning Instance based

learning
Find-s algorithm EM algorithm
Candidate elimination algorithm
Decision tree algorithm
Back propagation Algorithm Locally weighted
Naïve Bayes Algorithm K means algorithm Regression algorithm
K nearest neighbour
algorithm(lazy learning
algorithm)
Machine learning applications
In classification, inputs are divided into two or more classes, and the learner must produce a
model that assigns unseen inputs to one or more (multi-label classification) of these classes. This
is typically tackled in a supervised manner. Spam filtering is an example of classification, where
the inputs are email (or other) messages and the classes are "spam" and "not spam". In regression,
also a supervised problem, the outputs are continuous rather than discrete.

In clustering, a set of inputs is to be divided into groups. Unlike in classification, the groups are
not known beforehand, making this typically an unsupervised task. Density estimation finds the
distribution of inputs in some space. Dimensionality reduction simplifies inputs by mapping
them into a lower- dimensional space. Topic modeling is a related problem, where a program is
given a list of human language documents and is tasked with finding out which documents
cover similar topics.

Machine learning Approaches

Decision tree learning: Decision tree learning uses a decision tree as a predictive model, which maps
observations about an item to conclusions about the item's target value. Association rule learning
Association rule learning is a method for discovering interesting relations between variables in large
databases.

Artificial neural networks

An artificial neural network (ANN) learning algorithm, usually called "neural network" (NN), is
a learning algorithm that is vaguely inspired by biological neural networks. Computations are
structured in terms of an interconnected group of artificial neurons, processing information using
a connectionist approach to computation. Modern neural networks are non-linear statistical data
modeling tools. They are usually used to model complex relationships between inputs and
outputs, to find patterns in data, or to capture the statistical structure in an unknown joint
probability distribution between observed variables.

Deep learning

Falling hardware prices and the development of GPUs for personal use in the last few years
have contributed to the development of the concept of deep learning which consists of multiple
hidden layers in an artificial neural network. This approach tries to model the way the human
brain processes light and sound into vision and hearing. Some successful applications of deep
learning are computer vision and speech recognition.

Inductive logic programming

Inductive logic programming (ILP) is an approach to rule learning using logic programming as a
uniform representation for input examples, background knowledge, and hypotheses. Given an
encoding of the known background knowledge and a set of examples represented as a logical
database of facts, an ILP system will derive a hypothesized logic program that entails all positive
and no negative examples. Inductive programming is a related field that considers any kind of
programming languages for representing hypotheses (and not only logic programming), such as
functional programs.

Support vector machines

Support vector machines (SVMs) are a set of related supervised learning methods used for
classification and regression. Given a set of training examples, each marked as belonging to one
of two categories, an SVM training algorithm builds a model that predicts whether a new
example falls into one category or the other.

Clustering

Cluster analysis is the assignment of a set of observations into subsets (called clusters) so that
observations within the same cluster are similar according to some pre designated criterion or
criteria, while observations drawn from different clusters are dissimilar. Different clustering
techniques make different assumptions on the structure of the data, often defined by some
similarity metric and evaluated for example by internal compactness (similarity between
members of the same cluster) and separation between different clusters. Other methods are based
on estimated density and graph connectivity. Clustering is a method of unsupervised learning,
and a common technique for statistical data analysis.

Bayesian networks

A Bayesian network, belief network or directed acyclic graphical model is a probabilistic graphical
model that represents a set of random variables and their conditional independencies via a directed
acyclic graph (DAG). For example, a Bayesian network could represent the probabilistic
relationships between diseases and symptoms. Given symptoms, the network can be used to
compute the probabilities of the presence of various diseases. Efficient algorithms exist that
perform inference and learning.

Reinforcement learning
Reinforcement learning is concerned with how an agent ought to take actions in an environment
so as to maximize some notion of long-term reward. Reinforcement learning algorithms attempt
to find a policy that maps states of the world to the actions the agent ought to take in those states.
Reinforcement learning differs from the supervised learning problem in that correct input/output
pairs are never presented, nor sub-optimal actions explicitly corrected.

Similarity and metric learning

In this problem, the learning machine is given pairs of examples that are considered similar and
pairs of less similar objects. It then needs to learn a similarity function (or a distance metric
function) that can predict if new objects are similar. It is sometimes used in Recommendation
systems.

Genetic algorithms
A genetic algorithm (GA) is a search heuristic that mimics the process of natural selection, and
uses methods such as mutation and crossover to generate new genotype in the hope of finding
good solutions to a given problem. In machine learning, genetic algorithms found some uses in
the 1980s and 1990s. Conversely, machine learning techniques have been used to improve the
performance of genetic and evolutionary algorithms.
Rule-based machine learning

Rule-based machine learning is a general term for any machine learning method that identifies,
learns, or evolves "rules" to store, manipulate or apply, knowledge. The defining characteristic
of a rule-based machine learner is the identification and utilization of a set of relational rules that
collectively represent the knowledge captured by the system. This is in contrast to other machine
learners that commonly identify a singular model that can be universally applied to any instance
in order to make a prediction. Rule-based machine learning approaches include learning
classifier systems, association rule learning, and artificial immune systems.

Feature selection approach

Feature selection is the process of selecting an optimal subset of relevant features for use in
model construction. It is assumed the data contains some features that are either redundant or
irrelevant, and can thus be removed to reduce calculation cost without incurring much loss of
information. Common optimality criteria include accuracy, similarity and information measures.
 MACHINE LEARNING LABORATORY

Course objectives: This course will enable students to

1. Make use of Data sets in implementing the machine learning algorithms

2. Implement the machine learning concepts and algorithms in any suitable
language of choice.

Description (If any):

1. The programs can be implemented in either JAVA or Python.

2. For Problems 1 to 6 and 10, programs are to be developed without using the
built- in classes or APIs of Java/Python.
3. Data sets can be taken from standard repositories
(https://archive.ics.uci.edu/ml/datasets.html) or constructedby the students.

Lab Experiments:

1. Implement and demonstrate the FIND-S algorithm for finding the most specific
hypothesis based on a given set of training data samples. Read the training data from
a
.CSV file.

2. For a given set of training data examples stored in a .CSV file, implement and
demonstrate the Candidate-Elimination algorithm to output a description of the set of
all hypotheses consistent with the training examples.

3. Write a program to demonstrate the working of the decision tree based ID3 algorithm.
Use an appropriate data set for building the decision tree and apply this knowledge to
classify a new sample.
4. Build an Artificial Neural Network by implementing the Back-Propagation algorithm
and test the same using appropriate data sets.

5. Write a program to implement the naïve Bayesian classifier for a sample training data
set stored as a .CSV file. Compute the accuracy of the classifier, considering few test
data sets.

6. Assuming a set of documents that need to be classified, use the naïve Bayesian
Classifier model to perform this task. Built-in Java classes/API can be used to write
the program. Calculate the accuracy, precision, and recall for your data set.

7. Write a program to construct a Bayesian network considering medical data. Use this
model to demonstrate the diagnosis of heart patients using standard Heart Disease
Data Set. You can use Java/Python ML library classes/API.

8. Apply EM algorithm to cluster a set of data stored in a .CSV file. Use the same data
set for clustering using k-Means algorithm. Compare the results of these two
algorithms and comment on the quality of clustering. You can add Java/Python ML
library classes/API in the program.

9. Write a program to implement k-Nearest Neighbour algorithm to classify the iris data
set. Print both correct and wrong predictions. Java/Python ML library classes can be
 used for this problem.

10. Implement the non-parametric Locally Weighted Regression algorithm in order to fit
data points. Select appropriate data set for your experiment and draw graphs.

Study Experiment / Project:

Course outcomes: The students should be able to:

1. Understand the implementation procedures for the machine learning algorithms.

2. Design Java/Python programs for various Learning algorithms.
3. Apply appropriate data sets to the Machine Learning algorithms.
4. Identify and apply Machine Learning algorithms to solve real world problems.
1. Implement and demonstrate the FIND-S algorithm for finding the most specific
hypothesis based on a given set of training data samples. Read the training data
from a .CSV file.
import csv

with open('tennis.csv', 'r') as f:

reader = csv.reader(f)
your_list = list(reader)

h = [['0', '0', '0', '0', '0', '0']]

for i in
your_list:
print(i)
if i[-1] ==
"True": j = 0
for x in i:
if x != "True":
if x != h[0][j] and h[0][j] == '0':
h[0][j] = x
elif x != h[0][j] and h[0][j] != '0':
h[0][j] = '?'
else:
pass
j=j+1
print("Most specific hypothesis is")
print(h)

Output

'Sunny', 'Warm', 'Normal', 'Strong', 'Warm', 'Same',True

'Sunny', 'Warm', 'High', 'Strong', 'Warm', 'Same',True
'Rainy', 'Cold', 'High', 'Strong', 'Warm', 'Change',False
'Sunny', 'Warm', 'High', 'Strong', 'Cool','Change',True

Maximally Specific set

[['Sunny', 'Warm', '?', 'Strong', '?', '?']]
2. For a given set of training data examples stored in a .CSV file, implement and
demonstrate the Candidate-Elimination algorithm to output a description of the set of
all hypotheses consistent with the training examples.

class Holder:
factors={} #Initialize an empty dictionary
attributes = () #declaration of dictionaries parameters with an arbitrary length

'''
Constructor of class Holder holding two parameters,
self refers to the instance of the class
'''
def init (self,attr): #
self.attributes = attr
for i in attr:
self.factors[i]=[]

def add_values(self,factor,values):
self.factors[factor]=values

class CandidateElimination:
Positive={} #Initialize positive empty dictionary
Negative={} #Initialize negative empty dictionary

def init (self,data,fact):

self.num_factors = len(data[0][0])
self.factors = fact.factors
self.attr = fact.attributes
self.dataset = data

def run_algorithm(self):
'''
Initialize the specific and general boundaries, and loop the dataset against the
algorithm
'''
G = self.initializeG()
S = self.initializeS()

'''
Programmatically populate list in the iterating variable
trial_set '''
count=0
for trial_set in self.dataset:
if self.is_positive(trial_set): #if trial set/example consists of positive examples
G = self.remove_inconsistent_G(G,trial_set[0]) #remove inconsitent data from
the general boundary
 S_new = S[:] #initialize the dictionary with no key-value pair
print (S_new)
for s in S:
if not self.consistent(s,trial_set[0]):
S_new.remove(s)
generalization = self.generalize_inconsistent_S(s,trial_set[0])
generalization = self.get_general(generalization,G)
if generalization:
S_new.append(generalization)
S = S_new[:]
S = self.remove_more_general(S)
print(S)

else:#if it is negative

S = self.remove_inconsistent_S(S,trial_set[0]) #remove inconsitent data from

the specific boundary
G_new = G[:] #initialize the dictionary with no key-value pair (dataset can
take any value)
print (G_new)
for g in G:
if self.consistent(g,trial_set[0]):
G_new.remove(g)
specializations = self.specialize_inconsistent_G(g,trial_set[0])
specializationss = self.get_specific(specializations,S)
if specializations != []:
G_new += specializationss
G = G_new[:]
G = self.remove_more_specific(G)
print(G)

print (S)
print (G)

def initializeS(self):
''' Initialize the specific boundary '''
S = tuple(['-' for factor in range(self.num_factors)]) #6 constraints in the vector
return [S]

def initializeG(self):
''' Initialize the general boundary '''
G = tuple(['?' for factor in range(self.num_factors)]) # 6 constraints in the
vector return [G]

def is_positive(self,trial_set):
''' Check if a given training trial_set is positive '''
if trial_set[1] == 'Y':
 return True
elif trial_set[1] == 'N':
return False
else:
raise TypeError("invalid target value")

def match_factor(self,value1,value2):
''' Check for the factors values match,
necessary while checking the consistency of
training trial_set with the hypothesis '''
if value1 == '?' or value2 ==
'?': return True
elif value1 == value2 :
return True
return False

def consistent(self,hypothesis,instance):
''' Check whether the instance is part of the hypothesis
''' for i,factor in enumerate(hypothesis):
if not self.match_factor(factor,instance[i]):
return False
return True

def remove_inconsistent_G(self,hypotheses,instance):
''' For a positive trial_set, the hypotheses in G
inconsistent with it should be removed '''
G_new = hypotheses[:]

for g in hypotheses:
if not self.consistent(g,instance):
G_new.remove(g)
return G_new

def remove_inconsistent_S(self,hypotheses,instance):
''' For a negative trial_set, the hypotheses in S
inconsistent with it should be removed '''
S_new = hypotheses[:]
for s in hypotheses:
if self.consistent(s,instance):
S_new.remove(s)
return S_new

def remove_more_general(self,hypotheses):
''' After generalizing S for a positive trial_set, the hypothesis in S
general than others in S should be removed '''
S_new = hypotheses[:]
for old in hypotheses:
 for new in S_new:
if old!=new and self.more_general(new,old):
S_new.remove[new]
return S_new

def remove_more_specific(self,hypotheses):
''' After specializing G for a negative trial_set, the hypothesis in G
specific than others in G should be removed '''
G_new =
hypotheses[:] for old
in hypotheses: for new
in G_new:
if old!=new and self.more_specific(new,old):
G_new.remove[new]
return G_new

def generalize_inconsistent_S(self,hypothesis,instance):
''' When a inconsistent hypothesis for positive trial_set is seen in the specific
boundary S,
it should be generalized to be consistent with the trial_set ... we will get
one hypothesis'''
hypo = list(hypothesis) # convert tuple to list for mutability
for i,factor in enumerate(hypo):
if factor == '-':
hypo[i] = instance[i]
elif not self.match_factor(factor,instance[i]):
hypo[i] = '?'
generalization = tuple(hypo) # convert list back to tuple for immutability
return generalization

def specialize_inconsistent_G(self,hypothesis,instance):
''' When a inconsistent hypothesis for negative trial_set is seen in the general
boundary G
should be specialized to be consistent with the trial_set.. we will get a set of
hypotheses '''
specializations = []
hypo = list(hypothesis) # convert tuple to list for mutability
for i,factor in enumerate(hypo):
if factor == '?':
values = self.factors[self.attr[i]]
for j in values:
if instance[i] != j:
hyp=hypo[:]
hyp[i]=j
hyp=tuple(hyp) # convert list back to tuple for immutability
specializations.append(hyp)
return specializations
def get_general(self,generalization,G):
''' Checks if there is more general hypothesis in G
for a generalization of inconsistent hypothesis in S
in case of positive trial_set and returns valid generalization '''

for g in G:
if self.more_general(g,generalization):
return generalization
return None

def get_specific(self,specializations,S):
''' Checks if there is more specific hypothesis in S
for each of hypothesis in specializations of an
inconsistent hypothesis in G in case of negative trial_set
and return the valid specializations'''
valid_specializations = []
for hypo in specializations:
for s in S:
if self.more_specific(s,hypo) or s==self.initializeS()[0]:
valid_specializations.append(hypo)
return valid_specializations

def exists_general(self,hypothesis,G):
'''Used to check if there exists a more general hypothesis in
general boundary for version space'''

for g in G:
if self.more_general(g,hypothesis):
return True
return False

def exists_specific(self,hypothesis,S):
'''Used to check if there exists a more specific hypothesis in
general boundary for version space'''

for s in S:
if self.more_specific(s,hypothesis):
return True
return False

def more_general(self,hyp1,hyp2):
''' Check whether hyp1 is more general than hyp2 '''
hyp = zip(hyp1,hyp2)
for i,j in hyp:
if i == '?':
continue
 elif j == '?':
if i != '?':
return False
elif i != j:
return False
else:
continue
return True

def more_specific(self,hyp1,hyp2):
''' hyp1 more specific than hyp2 is
equivalent to hyp2 being more general than hyp1 '''
return self.more_general(hyp2,hyp1)

dataset=[(('sunny','warm','normal','strong','warm','same'),'Y'),(('sunny','warm','high','stron
g','warm','same'),'Y'),(('rainy','cold','high','strong','warm','change'),'N'),(('sunny','warm','hi
gh','strong','cool','change'),'Y')]
attributes =('Sky','Temp','Humidity','Wind','Water','Forecast')
f = Holder(attributes)
f.add_values('Sky',('sunny','rainy','cloudy')) #sky can be sunny rainy or cloudy
f.add_values('Temp',('cold','warm')) #Temp can be sunny cold or warm
f.add_values('Humidity',('normal','high')) #Humidity can be normal or high
f.add_values('Wind',('weak','strong')) #wind can be weak or strong f.add_values('Water',
('warm','cold')) #water can be warm or cold f.add_values('Forecast',('same','change'))
#Forecast can be same or change
a = CandidateElimination(dataset,f) #pass the dataset to the algorithm class and call
the run algoritm method
a.run_algorithm()

Output

[('sunny', 'warm', 'normal', 'strong', 'warm', 'same')]

[('sunny', 'warm', 'normal', 'strong', 'warm','same')]
[('sunny', 'warm', '?', 'strong', 'warm', 'same')]
[('?', '?', '?', '?', '?', '?')]
[('sunny', '?', '?', '?', '?', '?'), ('?', 'warm', '?', '?', '?', '?'), ('?', '?', '?', '?', '?', 'same')]
[('sunny', 'warm', '?', 'strong', 'warm', 'same')]
[('sunny', 'warm', '?', 'strong', '?', '?')]
[('sunny', 'warm', '?', 'strong', '?', '?')]
[('sunny', '?', '?', '?', '?', '?'), ('?', 'warm', '?', '?', '?', '?')]
3. Write a program to demonstrate the working of the decision tree based ID3 algorithm.
Use an appropriate data set for building the decision tree and apply this knowledge to
classify a new sample.

import numpy as np
import math
from data_loader import read_data

class Node:
def init (self, attribute):
self.attribute = attribute
self.children = []
self.answer = ""

def str (self):

return self.attribute

def subtables(data, col, delete):

dict = {}
items = np.unique(data[:, col])

count = np.zeros((items.shape[0], 1),

dtype=np.int32) for x in range(items.shape[0]):

for y in range(data.shape[0]):
if data[y, col] == items[x]:
count[x] += 1

for x in range(items.shape[0]):
dict[items[x]] = np.empty((int(count[x]), data.shape[1]), dtype="|S32")

pos = 0
for y in range(data.shape[0]):
if data[y, col] == items[x]:
dict[items[x]][pos] = data[y]
pos += 1

if delete:
dict[items[x]] = np.delete(dict[items[x]], col, 1)

return items, dict

def entropy(S):
items = np.unique(S)
if items.size == 1:
 return 0

counts = np.zeros((items.shape[0], 1))

sums = 0

for x in range(items.shape[0]):

counts[x] = sum(S == items[x]) / (S.size * 1.0)

for count in counts:

sums += -1 * count * math.log(count, 2)
return sums

def gain_ratio(data, col):

items, dict = subtables(data, col, delete=False)

total_size = data.shape[0]
entropies = np.zeros((items.shape[0], 1))
intrinsic = np.zeros((items.shape[0], 1))
for x in range(items.shape[0]):
ratio = dict[items[x]].shape[0]/(total_size * 1.0)
entropies[x] = ratio * entropy(dict[items[x]][:, -1])
intrinsic[x] = ratio * math.log(ratio, 2)

total_entropy = entropy(data[:, -1])

iv = -1 * sum(intrinsic)

for x in range(entropies.shape[0]):
total_entropy -= entropies[x]

return total_entropy / iv

def create_node(data, metadata):

if (np.unique(data[:, -1])).shape[0] == 1:
node = Node("")
node.answer = np.unique(data[:, -1])[0]
return node

gains = np.zeros((data.shape[1] - 1, 1))

for col in range(data.shape[1] - 1):
gains[col] = gain_ratio(data, col)

split = np.argmax(gains)

node = Node(metadata[split])
 metadata = np.delete(metadata, split, 0)
items, dict = subtables(data, split, delete=True)

for x in range(items.shape[0]):
child = create_node(dict[items[x]], metadata)
node.children.append((items[x], child))

return node

def empty(size):
s = ""
for x in range(size):
s += " "
return s

def print_tree(node, level):

if node.answer != "":
print(empty(level), node.answer)
return

print(empty(level), node.attribute)

for value, n in node.children:

print(empty(level + 1), value)
print_tree(n, level + 2)

metadata, traindata = read_data("tennis.csv")

data = np.array(traindata)
node = create_node(data, metadata)
print_tree(node, 0)

Data_loader.py
import csv
def read_data(filename):
with open(filename, 'r') as csvfile:
datareader = csv.reader(csvfile, delimiter=',')
headers = next(datareader)
metadata = []
traindata = []
for name in headers:
metadata.append(name)
for row in datareader:
traindata.append(row)

return (metadata, traindata)

Tennis.csv

outlook,temperature,humidity,wind,
answer sunny,hot,high,weak,no
sunny,hot,high,strong,no
overcast,hot,high,weak,yes
rain,mild,high,weak,yes
rain,cool,normal,weak,yes
rain,cool,normal,strong,no
overcast,cool,normal,strong,yes
sunny,mild,high,weak,no
sunny,cool,normal,weak,yes
rain,mild,normal,weak,yes
sunny,mild,normal,strong,yes
overcast,mild,high,strong,yes
overcast,hot,normal,weak,yes
rain,mild,high,strong,no

Output
outlook
overcast
b'yes'
rain
wind
b'strong'
b'no'
b'weak'
b'yes'
sunny
humidity
b'high'
b'no'
b'normal'
b'yes
4. Build an Artificial Neural Network by implementing the Backpropagation
algorithm and test the same using appropriate data sets.

import numpy as np
X = np.array(([2, 9], [1, 5], [3, 6]), dtype=float)
y = np.array(([92], [86], [89]), dtype=float)
X = X/np.amax(X,axis=0) # maximum of X array longitudinally
y = y/100

#Sigmoid Function
def sigmoid (x):
return 1/(1 + np.exp(-x))

#Derivative of Sigmoid Function

def derivatives_sigmoid(x):
return x * (1 - x)

#Variable initialization
epoch=7000 #Setting training iterations
lr=0.1 #Setting learning rate
inputlayer_neurons = 2 #number of features in data set
hiddenlayer_neurons = 3 #number of hidden layers neurons
output_neurons = 1 #number of neurons at output layer
#weight and bias initialization
wh=np.random.uniform(size=(inputlayer_neurons,hiddenlayer_neurons))
bh=np.random.uniform(size=(1,hiddenlayer_neurons))
wout=np.random.uniform(size=(hiddenlayer_neurons,output_neurons))
bout=np.random.uniform(size=(1,output_neurons))
#draws a random range of numbers uniformly of dim x*y
for i in range(epoch):

#Forward Propogation
hinp1=np.dot(X,wh)
hinp=hinp1 + bh
hlayer_act = sigmoid(hinp)
outinp1=np.dot(hlayer_act,wout)
outinp= outinp1+ bout
output = sigmoid(outinp)

#Backpropagation
EO = y-output
outgrad = derivatives_sigmoid(output)
d_output = EO* outgrad
EH = d_output.dot(wout.T)
hiddengrad = derivatives_sigmoid(hlayer_act)#how much hidden layer wts
contributed to error
 d_hiddenlayer = EH * hiddengrad
wout += hlayer_act.T.dot(d_output) *lr# dotproduct of nextlayererror and
currentlayerop
# bout += np.sum(d_output, axis=0,keepdims=True) *lr
wh += X.T.dot(d_hiddenlayer) *lr
#bh += np.sum(d_hiddenlayer, axis=0,keepdims=True) *lr
print("Input: \n" + str(X))
print("Actual Output: \n" + str(y))
print("Predicted Output: \n" ,output)

output
Input:
[[ 0.66666667 1. ]
[ 0.33333333 0.55555556]
[ 1. 0.66666667]]
Actual Output:
[[ 0.92]
[ 0.86]
[ 0.89]]
Predicted Output:
[[ 0.89559591]
[ 0.88142069]
[ 0.8928407 ]]
5.Write a program to implement the naïve Bayesian classifier for a sample training data
set stored as a .CSV file. Compute the accuracy of the classifier, considering few test
data sets.

import csv
import random
import math

def loadCsv(filename):
lines = csv.reader(open(filename, "r"));
dataset = list(lines)
for i in range(len(dataset)):
#converting strings into numbers for processing
dataset[i] = [float(x) for x in dataset[i]]

return dataset

def splitDataset(dataset, splitRatio):

#67% training size
trainSize = int(len(dataset) * splitRatio);
trainSet = []
copy = list(dataset);
while len(trainSet) < trainSize:
#generate indices for the dataset list randomly to pick ele for training data
index = random.randrange(len(copy));
trainSet.append(copy.pop(index))
return [trainSet, copy]
def separateByClass(dataset):
separated = {}
#creates a dictionary of classes 1 and 0 where the values are the instacnes belonging
to each class
for i in range(len(dataset)):
vector = dataset[i]
if (vector[-1] not in separated):
separated[vector[-1]] = []
separated[vector[-1]].append(vector)
return separated

def mean(numbers):
return sum(numbers)/float(len(numbers))

def stdev(numbers):
avg = mean(numbers)
variance = sum([pow(x-avg,2) for x in numbers])/float(len(numbers)-1)
return math.sqrt(variance)
def summarize(dataset):
summaries = [(mean(attribute), stdev(attribute)) for attribute in zip(*dataset)];
del summaries[-1]
return summaries

def summarizeByClass(dataset):
separated = separateByClass(dataset);
summaries = {}
for classValue, instances in separated.items():
#summaries is a dic of tuples(mean,std) for each class value
summaries[classValue] = summarize(instances)
return summaries

def calculateProbability(x, mean, stdev):

exponent = math.exp(-(math.pow(x-mean,2)/(2*math.pow(stdev,2))))
return (1 / (math.sqrt(2*math.pi) * stdev)) * exponent

def calculateClassProbabilities(summaries, inputVector):

probabilities = {}
for classValue, classSummaries in summaries.items():#class and attribute information
as mean and sd
probabilities[classValue] = 1
for i in range(len(classSummaries)):
mean, stdev = classSummaries[i] #take mean and sd of every attribute
for class 0 and 1 seperaely
x = inputVector[i] #testvector's first attribute
probabilities[classValue] *= calculateProbability(x, mean, stdev);#use
normal dist
return probabilities

def predict(summaries, inputVector):

probabilities = calculateClassProbabilities(summaries, inputVector)
bestLabel, bestProb = None, -1
for classValue, probability in probabilities.items():#assigns that class which has he
highest prob
if bestLabel is None or probability > bestProb:
bestProb = probability
bestLabel = classValue
return bestLabel

def getPredictions(summaries, testSet):

predictions = []
for i in range(len(testSet)):
result = predict(summaries, testSet[i])
predictions.append(result)
return predictions
def getAccuracy(testSet, predictions):
correct = 0
for i in range(len(testSet)):
if testSet[i][-1] == predictions[i]:
correct += 1
return (correct/float(len(testSet))) * 100.0

def main():
filename = '5data.csv'
splitRatio = 0.67
dataset = loadCsv(filename);

trainingSet, testSet = splitDataset(dataset, splitRatio)

print('Split {0} rows into train={1} and test={2} rows'.format(len(dataset),
len(trainingSet), len(testSet)))
# prepare model
summaries = summarizeByClass(trainingSet);
# test model
predictions = getPredictions(summaries, testSet)
accuracy = getAccuracy(testSet, predictions)
print('Accuracy of the classifier is : {0}%'.format(accuracy))

main()

Output
confusion matrix is as
follows [[17 0 0]
[ 0 17 0]
[ 0 0 11]]
Accuracy metrics
precision recall f1-score support

0 1.00 1.00 1.00 17

1 1.00 1.00 1.00 17
2 1.00 1.00 1.00 11

avg / 1.00 1.00 1.00 45

total
6. Assuming a set of documents that need to be classified, use the naïve Bayesian
Classifier model to perform this task. Built-in Java classes/API can be used to write
the program. Calculate the accuracy, precision, and recall for your data set.

import pandas as pd
msg=pd.read_csv('naivetext1.csv',names=['message','label'])
print('The dimensions of the dataset',msg.shape)
msg['labelnum']=msg.label.map({'pos':1,'neg':0})
X=msg.message
y=msg.labelnum
print(X)
print(y)

#splitting the dataset into train and test data

from sklearn.model_selection import train_test_split
xtrain,xtest,ytrain,ytest=train_test_split(X,y)
print(xtest.shape)
print(xtrain.shape)
print(ytest.shape)
print(ytrain.shape)
#output of count vectoriser is a sparse matrix
from sklearn.feature_extraction.text import CountVectorizer
count_vect = CountVectorizer()
xtrain_dtm = count_vect.fit_transform(xtrain)
xtest_dtm=count_vect.transform(xtest)
print(count_vect.get_feature_names())

df=pd.DataFrame(xtrain_dtm.toarray(),columns=count_vect.get_feature_names())
print(df)#tabular representation
print(xtrain_dtm) #sparse matrix representation

# Training Naive Bayes (NB) classifier on training data.

from sklearn.naive_bayes import MultinomialNB
clf = MultinomialNB().fit(xtrain_dtm,ytrain)
predicted = clf.predict(xtest_dtm)

#printing accuracy metrics

from sklearn import
metrics print('Accuracy
metrics')
print('Accuracy of the classifer is',metrics.accuracy_score(ytest,predicted))
print('Confusion matrix')
print(metrics.confusion_matrix(ytest,predicted))
print('Recall and Precison ')
print(metrics.recall_score(ytest,predicted))
print(metrics.precision_score(ytest,predicted))

'''docs_new = ['I like this place', 'My boss is not my saviour']

X_new_counts = count_vect.transform(docs_new)
predictednew = clf.predict(X_new_counts)
for doc, category in zip(docs_new, predictednew):
print('%s->%s' % (doc, msg.labelnum[category]))'''

I love this sandwich,pos

This is an amazing
place,pos
I feel very good about these beers,pos
This is my best work,pos
What an awesome view,pos
I do not like this restaurant,neg
I am tired of this stuff,neg
I can't deal with this,neg
He is my sworn enemy,neg
My boss is horrible,neg
This is an awesome place,pos
I do not like the taste of this juice,neg
I love to dance,pos
I am sick and tired of this place,neg
What a great holiday,pos
That is a bad locality to stay,neg
We will have good fun tomorrow,pos
I went to my enemy's house
today,neg

OUTPUT

['about', 'am', 'amazing', 'an', 'and', 'awesome', 'beers', 'best', 'boss', 'can', 'deal',
'do', 'enemy', 'feel', 'fun', 'good', 'have', 'horrible', 'house', 'is', 'like', 'love', 'my',
'not', 'of', 'place', 'restaurant', 'sandwich', 'sick', 'stuff', 'these', 'this', 'tired', 'to',
'today', 'tomorrow', 'very', 'view', 'we', 'went', 'what', 'will', 'with', 'work']
about am amazing an and awesome beers best boss can ... today \
0 1 0 0 0 0 0 1 0 0 0 ... 0
1 0 0 0 0 0 0 0 1 0 0 ... 0
2 0 0 1 1 0 0 0 0 0 0 ... 0
3 0 0 0 0 0 0 0 0 0 0 ... 1
4 0 0 0 0 0 0 0 0 0 0 ... 0
5 01 0 0 1 0 0 0 0 0 ... 0
6 0 0 0 0 0 0 0 0 0 1 ... 0
7 0 0 0 0 0 0 0 0 0 0 ... 0
8 0 1 0 0 0 0 0 0 0 0 ... 0
9 0 0 0 1 0 1 0 0 0 0 ... 0
10 0 0 0 0 0 0 0 0 0 0 ... 0
11 0 0 0 0 0 0 0 0 1 0 ... 0
12 0 0 0 1 0 1 0 0 0 0 ... 0
 tomorrow very view we went what will with
work 0 0 1 0 0 00 0 00
1 0 0 0 0 00 0 0 1
2 0 0 0 0 00 0 0 0
3 0 0 0 0 10 0 0 0
4 0 0 0 0 00 0 0 0
5 0 0 0 0 00 0 0 0
6 0 0 0 0 00 0 1 0
7 1 0 0 1 00 1 0 0
8 0 0 0 0 00 0 0 0
7.Write a program to construct a Bayesian network considering medical data.
Use this model to demonstrate the diagnosis of heart patients using standard
Heart Disease Data Set. You can use Java/Python ML library classes/API.

From pomegranate import*

Asia=DiscreteDistribution({ „True‟:0.5, „False‟:0.5 })
Tuberculosis=ConditionalProbabilityTable(
[[ „True‟, „True‟, 0.2],
[„True‟, „False‟, 0.8],
[ „False‟, „True‟, 0.01],
[ „False‟, „False‟, 0.98]], [asia])

Smoking = DiscreteDistribution({ „True‟:0.5, „False‟:0.5 })

Lung = ConditionalProbabilityTable(
[[ „True‟, „True‟, 0.75],
[„True‟, „False‟,0.25].
[ „False‟, „True‟, 0.02],
[ „False‟, „False‟, 0.98]], [ smoking])

Bronchitis = ConditionalProbabilityTable(
[[ „True‟, „True‟, 0.92],
[„True‟, „False‟,0.08].
[ „False‟, „True‟,0.03],
[ „False‟, „False‟, 0.98]], [ smoking])

Tuberculosis_or_cancer = ConditionalProbabilityTable(
[[ „True‟, „True‟, „True‟, 1.0],
[„True‟, „True‟, „False‟, 0.0],
[„True‟, „False‟, „True‟, 1.0],
[„True‟, „False‟, „False‟, 0.0],
[„False‟, „True‟, „True‟, 1.0],
[„False‟, „True‟, „False‟, 0.0],
[„False‟, „False‟ „True‟, 1.0],
[„False‟, „False‟, „False‟, 0.0]], [tuberculosis, lung])

Xray = ConditionalProbabilityTable(
[[ „True‟, „True‟, 0.885],
[„True‟, „False‟, 0.115],
[ „False‟, „True‟, 0.04],
[ „False‟, „False‟, 0.96]], [tuberculosis_or_cancer])
dyspnea = ConditionalProbabilityTable(
[[ „True‟, „True‟, „True‟, 0.96],
[„True‟, „True‟, „False‟, 0.04],
[„True‟, „False‟, „True‟, 0.89],
[„True‟, „False‟, „False‟, 0.11],
[„False‟, „True‟, „True‟, 0.96],
[„False‟, „True‟, „False‟, 0.04],
[„False‟, „False‟ „True‟, 0.89],
[„False‟, „False‟, „False‟, 0.11 ]], [tuberculosis_or_cancer, bronchitis])
s0 = State(asia, name=”asia”)
s1 = State(tuberculosis, name=” tuberculosis”)
s2 = State(smoking, name=” smoker”)

network = BayesianNetwork(“asia”)
network.add_nodes(s0,s1,s2)
network.add_edge(s0,s1)
network.add_edge(s1.s2)
network.bake()
print(network.predict_probal({„tuberculosis‟: „True‟}))
8.Apply EM algorithm to cluster a set of data stored in a .CSV file. Use the same
data set for clustering using k-Means algorithm. Compare the results of these two
algorithms and comment on the quality of clustering. You can add Java/Python ML
library classes/API in the program.

import numpy as np
import matplotlib.pyplot as plt
from sklearn.datasets.samples_generator import make_blobs
X, y_true = make_blobs(n_samples=100, centers =
4,Cluster_std=0.60,random_state=0)
X = X[:, ::-1]

#flip axes for better plotting

from sklearn.mixture import GaussianMixture
gmm = GaussianMixture (n_components = 4).fit(X)
lables = gmm.predict(X)
plt.scatter(X[:, 0], X[:, 1], c=labels, s=40, cmap=‟viridis‟);
probs = gmm.predict_proba(X)
print(probs[:5].round(3))
size = 50 * probs.max(1) ** 2 # square emphasizes differences
plt.scatter(X[:, 0], X[:, 1], c=labels, cmap=‟viridis‟, s=size);

from matplotlib.patches import Ellipse

def draw_ellipse(position, covariance, ax=None, **kwargs);
“””Draw an ellipse with a given position and covariance”””
Ax = ax or plt.gca()
# Convert covariance to principal axes
if covariance.shape ==(2,2):

U, s, Vt = np.linalg.svd(covariance)
Angle = np.degrees(np.arctan2(U[1, 0], U[0,0]))
Width, height = 2 * np.sqrt(s)
else:
angle = 0
width, height = 2 * np.sqrt(covariance)

#Draw the Ellipse

for nsig in range(1,4):
ax.add_patch(Ellipse(position, nsig * width, nsig *height,
angle, **kwargs))

def plot_gmm(gmm, X, label=True, ax=None):

ax = ax or plt.gca()
labels = gmm.fit(X).predict(X)
if label:
 ax.scatter(X[:, 0], x[:, 1], c=labels, s=40, cmap=‟viridis‟, zorder=2)
else:
ax.scatter(X[:, 0], x[:, 1], s=40, zorder=2)
ax.axis(„equal‟)

w_factor = 0.2 / gmm.weights_.max()

for pos, covar, w in zip(gmm.means_, gmm.covariances_, gmm.weights_):
draw_ellipse(pos, covar, alpha=w * w_factor)

gmm = GaussianMixture(n_components=4, random_state=42)

plot_gmm(gmm, X)
gmm = GaussianMixture(n_components=4, covariance_type=‟full‟,
random_state=42)
plot_gmm(gmm, X)

Output

[[1 ,0, 0, 0]
[0 ,0, 1, 0]
[1 ,0, 0, 0]
[1 ,0, 0, 0]
[1 ,0, 0, 0]]
K-means
from sklearn.cluster import KMeans

#from sklearn import metrics

import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
data=pd.read_csv("kmeansdata.csv")
df1=pd.DataFrame(data)
print(df1)
f1 = df1['Distance_Feature'].values
f2 = df1['Speeding_Feature'].values

X=np.matrix(list(zip(f1,f2)))
plt.plot()
plt.xlim([0, 100])
plt.ylim([0, 50])
plt.title('Dataset')
plt.ylabel('speeding_feature')
plt.xlabel('Distance_Feature')
plt.scatter(f1,f2)
plt.show()

# create new plot and data

plt.plot()
colors = ['b', 'g', 'r']
markers = ['o', 'v', 's']

# KMeans algorithm
#K = 3
kmeans_model = KMeans(n_clusters=3).fit(X)

plt.plot()
for i, l in enumerate(kmeans_model.labels_):
plt.plot(f1[i], f2[i], color=colors[l], marker=markers[l],ls='None')
plt.xlim([0, 100])
plt.ylim([0, 50])

plt.show()

Driver_ID,Distance_Feature,Speeding_Feature
3423311935,71.24,28
3423313212,52.53,25
3423313724,64.54,27
3423311373,55.69,22
3423310999,54.58,25
3423313857,41.91,10
3423312432,58.64,20
3423311434,52.02,8
3423311328,31.25,34
3423312488,44.31,19
3423311254,49.35,40
3423312943,58.07,45
3423312536,44.22,22
3423311542,55.73,19
3423312176,46.63,43
3423314176,52.97,32
3423314202,46.25,35
3423311346,51.55,27
3423310666,57.05,26
3423313527,58.45,30
3423312182,43.42,23
3423313590,55.68,37
3423312268,55.15,18
9. Write a program to implement k-Nearest Neighbour algorithm to classify the iris
data set. Print both correct and wrong predictions. Java/Python ML library classes
can be used for this problem.
import csv
import random
import math
import operator

def loadDataset(filename, split, trainingSet=[] , testSet=[]):

with open(filename, 'rb') as csvfile:
lines = csv.reader(csvfile)
dataset = list(lines)
for x in range(len(dataset)-1):
for y in range(4):
dataset[x][y] = float(dataset[x][y])
if random.random() < split:
trainingSet.append(dataset[x])
else:
testSet.append(dataset[x])

def euclideanDistance(instance1, instance2, length):

distance = 0
for x in range(length):
distance += pow((instance1[x] - instance2[x]), 2)
return math.sqrt(distance)

def getNeighbors(trainingSet, testInstance, k):

distances = []
length = len(testInstance)-1
for x in range(len(trainingSet)):
dist = euclideanDistance(testInstance, trainingSet[x], length)
distances.append((trainingSet[x], dist))
distances.sort(key=operator.itemgetter(1))
neighbors = []
for x in range(k):
neighbors.append(distances[x][0])
return neighbors

def getResponse(neighbors):
classVotes = {}
for x in range(len(neighbors)):
response = neighbors[x][-1]
if response in classVotes:
classVotes[response] += 1
else:
classVotes[response] = 1
 sortedVotes =
sorted(classVotes.iteritems(),
reverse=True)
return sortedVotes[0][0]

def getAccuracy(testSet,
predictions): correct = 0
for x in
range(len(testSet)):
key=operator.itemgetter(1
),
if testSet[x][-1] ==
predictions[x]: correct +=
1
return (correct/float(len(testSet))) * 100.0

def main():
# prepare
data
trainingSet=
[] testSet=[]
split = 0.67
loadDataset('knndat.data', split, trainingSet,
testSet) print('Train set: ' +
repr(len(trainingSet))) print('Test set: ' +
repr(len(testSet)))
# generate
predictions
predictions=[]
k=3
for x in range(len(testSet)):
neighbors = getNeighbors(trainingSet, testSet[x],
k) result = getResponse(neighbors)
predictions.append(result)
print('> predicted=' + repr(result) + ', actual=' + repr(testSet[x]
[- 1])) accuracy = getAccuracy(testSet, predictions)
print('Accuracy: ' + repr(accuracy) +

'%') main()
OUTPUT
Confusion matrix is as follows

[[11 0 0]

[0 9 1]

[0 1 8]]

Accuracy metrics

0 1.00 1.00 1.00 11

1 0.90 0.90 0.90 10

2 0.89 0.89 0,89 9

Avg/Total 0.93 0.93 0.93 30

10.Implement the non-parametric Locally Weighted Regression algorithm in order
to fit data points. Select appropriate data set for your experiment and drawgraphs.

from numpy import

* import operator
from os import
listdir import
matplotlib
import matplotlib.pyplot as
plt import pandas as pd
import numpy as np1
import numpy.linalg as
np
from scipy.stats.stats import pearsonr

def kernel(point,xmat, k):

m,n = np1.shape(xmat)
weights =
np1.mat(np1.eye((m))) for j in
range(m):
diff = point - X[j]
weights[j,j] = np1.exp(diff*diff.T/(-
2.0*k**2)) return weights

def localWeight(point,xmat,ymat,k):
wei = kernel(point,xmat,k)
W=(X.T*(wei*X)).I*(X.T*(wei*ymat.T))
return W

def localWeightRegression(xmat,ymat,k):
m,n = np1.shape(xmat)
ypred =
np1.zeros(m) for i in
range(m):
ypred[i] = xmat[i]*localWeight(xmat[i],xmat,ymat,k)
return ypred

# load data points

data = pd.read_csv('data10.csv')
bill = np1.array(data.total_bill)
tip = np1.array(data.tip)

#preparing and add 1 in

bill mbill = np1.mat(bill)
mtip = np1.mat(tip)
m= np1.shape(mbill)[1]
one = np1.mat(np1.ones(m))
X= np1.hstack((one.T,mbill.T))
#set k here
ypred = localWeightRegression(X,mtip,2)

SortIndex =
X[:,1].argsort(0) xsort =
X[SortIndex][:,0]

Output
Viva Questions
1. What is machine learning?
2. Define supervised learning
3. Define unsupervised learning
4. Define semi supervised learning
5. Define reinforcement learning
6. What do you mean by hypotheses
7. What is classification
8. What is clustering
9. Define precision, accuracy and recall
10.Define entropy
11. Define regression
12. How Knn is different from k-means clustering

13. What is concept learning

14. Define specific boundary and general
boundary 15.Define target function
16.Define decision tree
17.What is ANN
18.Explain gradient descent approximation
19.State Bayes theorem
20.Define Bayesian belief networks
21.Differentiate hard and soft clustering
22. Define variance
23. What is inductive machine learning
24. Why K nearest neighbour algorithm is lazy learningalgorithm
25. Why naïve Bayes is naïve
26.Mention classification algorithms
27.Define pruning

28.Differentiate Clustering and classification

29.Mention clustering algorithms
30.Define Bias