Antibiotics Training Manual
Antibiotics Training Manual
Antibiotics Training Manual
Training Manual
Microbiology, Infections, and Antibiotic Therapy
Microbiology
Shapes of Bacteria
Coccus
Chain = Streptoccus
Cluster = Staphylococcus
Bacillus
Chain = Streptobacillus
Coccobacillus
Vibrio = curved
Spirochete
Bacterial Structures
Flagella
Capsule
Plasma Membrane
Cytoplasm
Cell Wall
Lipopolysaccharides
Teichoic Acids
Inclusions
Spores
Cytoplasm
DNA is circular,
More efficient; grows quicker
Mutations allow adaptation to environment quicker
Plasmids; extra circular DNA
Antibiotic Resistance
No organelles (Mitochondria, Golgi, etc.)
Cell Wall
Gm+ve
Gm-ve
Bacteria by Site of Infection
Mouth Skin/Soft Tissue Bone and Joint
Peptococcus S. aureus S. aureus
Peptostreptococcus S. pyogenes S. epidermidis
Actinomyces S. epidermidis Streptococci
Pasteurella N. gonorrhoeae
Gram- negative Bacilli
Infections
Respiratory Tract Infections
(R.T.I.s)
Tonsillopharyngitis
Definitions
tonsillitis: inflammation of pharyngeal tonsils
tonsillopharyngitis: inflammation extending from
tonsils to the adenoids and lingual tonsils
recurrent tonsillitis: 7 episodes in 1 year, 5 infections
in 2 consecutive years, or 3 infections each year for 3
years consecutively chronic tonsillitis: chronic sore
throat, halitosis, tonsillitis, and persistent tender
cervical nodes for greater than 4 weeks
quinsy: Greek term used for inflammation of throat
and tonsils, historically used for peritonsillar abscess
Epidemiology
most cases occur in school-age children
uncommon in the first 2 years of life
5-7 URIs per child per year
GAS (Group A-Betahymolytic Streptococci) is found in
35% of children with pharyngitis
Causes of Tonsillopharyngitis
• Beta hemolytic streptococcal infection — 22 %
• Mycoplasma pneumoniae — 9.4 %
• Chlamydia species strain — 8.4 %
• Viruses — 25.5 %
Huovinen, et al 1995
Why antibiotics
Treatment of GABHS pharyngitis is important
To prevent complications of infection,
particularly
rheumatic fever
suppurative complications
To speed recovery
To prevent spread of the infection
Recommendations on the Management of
Acute and Chronic Tonsillitis
The sinuses are hollow air-filled sacs lined by mucous membrane. The
ethmoid and maxillary sinuses are present at birth. The frontal sinus
develops during the 2nd year and the sphenoid sinus develops during
the 3rd year.
Sinuses have small orifices (ostia) which open into recesses (meati) of
the nasal cavities.
Meati are covered by turbinates (conchae).
Turbinates consist of bony shelves surrounded by erectile soft tissue.
There are 3 turbinates and 3 meati in each nasal cavity (superior,
middle, and inferior).
The funtion of sinuses is to reduce the weight of the skull and adjust
temperature of the air
Sinusitis
Inflammation of paranasal sinuses
Predisposing Factors
Antibiotic
Symptomatic treatment
Bronchitis
Acute exacerbations of chronic
bronchitis (A.E.C.B)
* > 2 in 6 months
UTI in Women
Escherichia coli—gram (-) etiologic agent in ~ 80% of all UTI’s
Research indicates primary source of microbial invasion is retrograde colonization by intestinal
pathogens
Other factors influencing colonization: vaginal pH, urethral length, capacity of bacteria to adhere to
urothelium
Polymicromial bacteriuria
Contamination most frequent cause of multiple microorganisms
25-33% in LTCF’s may be polymicrobic due to fistulas, urinary retention, infected stones, or
catheters
Age/Type Specific Pathogens
Younger patients, rare in elderly—Staphylcoccus, saprophyticus (gram pos.) – 10-15%
Elderly diabetics
Klebsiella species (gram neg.) most common
LTCF elderly
E. coli ~ 30%
Proteus species (part of host flori in GI tract) ~ 30%
Staphylcoccus aureus, Klebsiella, Pseudomonas (gram neg.) and Enterococcus (gram pos.)
~ 40%
C. trachomatis
produce mild form of salpingitis
slow growth (48-72 hr)
intracellular organism
insidious onset
remain in tubes for months/years after initial colonization of upper
genital tract
more severe tubes involvement
N. gonorrhoeae
gram –ve diplococcus
rapid growth (20-40 min)
rapid & intense inflammatory response
2 major sequelae (Result)
o infertility & ectopic pregnancy, strong asso. with prior Chalamydia
infection
Risk factors
Age of 1st intercourse
Frequency of intercourse
Number of sexual partners
Marital status ; 33% Nulliparous (is the medical term for a
woman who has never given birth to a viable, or live, infant)
Increase risk
IUD user (multifilament string)
surgical procedure
previous acute PID
Decrease risk
- barrier method
PID
Sequelae
Infertility
¼ of pt have acute salpingitis
occur 20%
infertility rate increase direct with number of episodes of acute pelvic infection
Ectopic pregnancy
increase 6-10 fold
50% occur in fallopian tubes
(previous salpingitis)
mechanism ; interfere ovum
transport entrapment of ovum
Chronic pelvic pain
4 times higher after acute salpingitis
caused by hydrosalpinx, adhesion around ovaries
should undergo laparoscope R/o other disease
Mortality
acute PID 1%
rupture TOA (Tubo-ovarian abscess)5-10%
Skin and Soft Tissue Infections (SSTI)
Skin - Definitions
Vesicles:
small, fluid-filled lesions in the epidermis
(eg. chicken pox)
Bullae:
larger, fluid-filled lesions in the epidermis
Macules:
flat, reddish lesion from inflammatory
infiltrate
Papules:
raised lesion which, when it contains pus,
is called pustule
Furunculosis(boils)
A furuncle or boil is an
acute round, tender,
circumscribed,
perifollicular
staphylococcal
inflammation, which
generally tends to
suppurate.
Folliculitis
Folliculitis is bacterial
infection of skin
appendages that
originates within the hair
follicles.
In infants and young
children, the scalp is the
commonest site involved
while in adults any hairy
area may be affected.
Cellulitis
Features:
Red
Swollen
Warm to
touch
No areas of
pus
Cellulitis Painful
Tender
Cellulitis
Abscess
Features:
Cellulitis
present
Swollen
Soft center,
feels like
fluid
underneath
Absces
s Painful
Cellulitis
Tender
Treatment of Abscesses
Definition:
Multi-factorial disease characterized by abnormalities in sebum
production, follicular desquamation, bacterial proliferation and
inflammation.
Prevalence:
85% adolescents experience it
Prevalence of comedones (lesions) in adolescents approaches 100%
affects 8% of 25 - 34y yr olds, and 3% of 35-44yr olds
Initial pathogenesis (reason unknown):
follicular hyperkeratinization
proliferation +
decreased desquamation of keratinocytes
hyperkeratotic plug
(microcomedone)
Pathogenesis
Inflammation results
Depending on conditions
closed comedo
(a whitehead):
Accumulation of sebum
converts a
microcomedo into this.
Open comedo (blackhead)
open comedo
(a blackhead):
when follicular orifice is
opened + distended.
Melanin + packed
keratinocytes + oxidized
lipids dark colour
Cysts
Cysts:
Topical Keratolytic
Combination of both
Hormonal treatment
Lazer Therapy
Dental Infections
GINGIVITIS
May progress painlessly, producing few obvious signs, even in the late
stages of the disease.
Symptoms include:
•Bleeding gums during and after tooth brushing
•Red, swollen, or tender gums
•Persistent bad breath or bad taste in the mouth
•Receding gums
•Formation of deep pockets between teeth and gums
•Loose or shifting teeth
•Changes in the way teeth fit together upon biting down, or in the fit
of partial dentures.
In some people, gum disease may affect only certain teeth, such as the
molars.
Microbiology, Infections, and Antibiotic Therapy
Antibiotic Therapy
History of Antibiotics
1980’s, Fluorinated
1928, 1962, Quinolones available
Penicillin 1940’s: Penicillin Quinolones
discovered becomes commercially discovered More potent
available and
Cephalosporins are Less toxic
synthesized
Changes to increase
activity
Antibiotic Therapy
Choice of Antibiotic:
Identify infecting organism
Evaluate drug sensitivity
Target site of infection
Drug safety/side effect profile
Patient factors
Cost
Classification of Antibiotics
Bacteriostatic Bactericidal
Classification of Antibiotics
Chemical Structure
Spectrum of Activity
Mechanism of Action
Mechanism of Action
Inhibitors of Cell Wall Synthesis
Beta Lactam Antibiotics
Penicillins
Cephalosporins
Carbapenems
Monobactams
Beta-Lactam Structure
Penicllins
• Mechanism of Action
interfere with cell wall synthesis by
binding to penicillin-binding proteins
(PBPs) which are located in bacterial
cell walls
inhibition of PBPs leads to inhibition of
peptidoglycan synthesis
are bactericidal
ALL -lactams
• Mechanisms of Resistance
production of beta-lactamase enzymes
most important and most common
Nafcillin
Oxacillin
Dicloxacillin
Aminopenicillins
Carbenicillin
Ticarcillin +/- clavulanate
Piperacillin +/- tazobactam
Cephalosporins
Structurally similar to
penicillins
Therapeutic
concentration in many
tissues, 3rd and 4th
generation into CSF
Renal Excretion
Side Effects
• allergy
• disulfiram-like effect
• anti-Vitamin K
Classification and Spectrum of Activity of
Cephalosporins
Aztreonam
single beta lactam ring
narrow spectrum: gram-
negative aerobes
• Enterobacteriacea
• Pseudomonas
given IV/IM
renal excretion
little cross-reactivity with
other beta lactams
side effects: phlebitis,
rash, elevated LFT’s
Carbapenems
Meropenem/Imipenem
broad spectrum
active against MRSA
given IV
penetrates CSF
renal metabolism and
excretion
addition of cilastin
side effects: GI upset,
eosinophilia, neutropenia,
lowering of seizure threshold
-Lactams Adverse Effects
• Hypersensitivity – 3 to 10 %
Higher incidence with parenteral administration or
procaine formulation
Mild to severe allergic reactions – rash to anaphylaxis
and death
Antibodies produced against metabolic by-products or
penicillin itself
Cross-reactivity exists among all penicillins and even
other -lactams
Desensitization is possible
-Lactams Adverse Effects
• Gastrointestinal
Increased LFTs, nausea, vomiting, diarrhea,
pseudomembranous colitis (C. difficile diarrhea)
• Interstitial Nephritis
Cellular infiltration in renal tubules (Type IV
hypersensitivity reaction – characterized by abrupt
increase in serum creatinine; can lead to renal failure
Especially with methicillin or nafcillin
Vancomycin
Tricyclic glycopeptide
Inhibits synthesis of phospholipids and cross-linking of
peptidoglycans
Activity against gram-positive organisms
Useful for beta lactam resistant infections
Widely distributed, penetrates CSF
Renal elimination, follows creatinine cl.
Side effects: phlebitis, red man syndrome, ototoxicity,
nephrotoxicity
Protein Synthesis Inhibitors
Human Ribosome
80S
• 40S
• 60S
Bacterial Ribosome
70S
• 30S
• 50S
Protein Synthesis Inhibitors
Mostly bacteriostatic
Selectivity due to
differences in prokaryotic
and eukaryotic ribosomes
Some toxicity –
eukaryotic 70S ribosomes
Review of Elongation of Protein Synthesis
P A Tetracycline P A
Tu GTP Tu GDP + Pi
GTP Ts
Ts Tu
Ts GDP
Chloramphenicol
GDP
+
Fusidic Acid G
G GDP + Pi
G GTP
P A P A
Erythromycin
Tetracyclines
Clarithromycin Azithromycin
Macrolides
Mechanisms of Resistance
Active efflux (accounts for 80%) – mef gene encodes
for an efflux pump which pumps the macrolide out of
the cell away from the ribosome; confers low level
resistance to macrolides
Altered target sites encoded by the erm gene which
alters the macrolide binding site on the ribosome;
confers high level resistance to all macrolides,
clindamycin and Synercid
Cross-resistance occurs between all macrolides
Macrolides Pharmacokinetics
Absorption
Erythromycin – variable absorption food may decrease the
absorption
• Base: destroyed by gastric acid; enteric coated
• Esters and ester salts: more acid stable
Clarithromycin – acid stable and well-absorbed regardless of
presence of food
Azithromycin –acid stable; food decreases absorption of capsules
Macrolides Pharmacokinetics
Distribution
Extensive tissue and cellular distribution – clarithromycin
and azithromycin with extensive penetration
Minimal CSF penetration
Elimination
Clarithromycin is the only macrolide partially eliminated
by the kidney (18% of parent and all metabolites);
requires dose adjustment when CrCl < 30 ml/min
Hepatically eliminated: ALL
NONE of the macrolides are removed during
hemodialysis!
Variable elimination half-lives (1.4 hours for erythro; 3 to
7 hours for clarithro; 68 hours for azithro)
Macrolides Adverse Effects
• Gastrointestinal – up to 33 %
Nausea, vomiting, diarrhea, dyspepsia
Most common with erythro; less with new agents
O O
Basic Structure O O
5 F
R6 4 OH
3 OH
1 2 N N
R7 X N Ciprofloxacin
8 HN
R1
O O Gemifloxacin
O O
F
OH F
OH
N N Levofloxacin H
N N
HN Moxifloxacin
N O CH3
H3 OCH3
C H
H
Fluoroquinolone Classification System (2-12)0
General
Brand Generic Manufacturer Generation Microbiology
Indications
NegGram Nalidixic acid Sanofi-synthelabo 1st Gram Negative but not Uncomplicated
pseudomonas UTIs
Tavanic Levofloxacin Sanofi Aventis 3rd Same as above +expanded gram — Acute
including pen sensitive and exacerbations of
Zagam Sparfloxacin Sanofi Aventis 3rd resistant s. pneumoniae. More so chronic
with Tequin and Avelox bronchitis and
Tequin Gatifloxacin Bristol-Myers Squibb 3rd
community
acquired
pneumoniae
Avelox Moxifloxacin Bayer 3rd
Factive Gemifloxacin LG Life sciences 3rd As other 3rd generation plus Acute
activity against gram –ve as 2nd exacerbations of
generations+Activity against chronic
MDRSP (Multi-Drug Resistant bronchitis ,
Streptococcus Pneumoniae) community
acquired
pneumoniae and
ABS
+UTI,Prostatitis
Trovan Trovafloxacin Pfizer 4th Same as above plus broad As above except
anaerobic coverage UTIs and
pyelonephritis.
Plus intra-
abdominal
infections, PID
and nosocomial
pneumonia
Fluoroquinolones
• Mechanism of Action
Unique mechanism of action
Inhibit bacterial topoisomerases which are
necessary for DNA synthesis
DNA gyrase – removes excess positive supercoiling in
the DNA helix
Primary target in gram-negative bacteria
Topoisomerase IV – essential for separation of
interlinked daughter DNA molecules
Primary target for many gram-positive bacteria
• Mechanisms of Resistance
target sites – chromosomal
Altered
mutations in genes that code for DNA
gyrase or topoisomerase IV
most important and most common
Alteredcell wall permeability –
decreased porin expression
Expression of active efflux – transfers
FQs out of cell
Cross-resistance occurs between FQs
The Available FQs
Older FQs
Norfloxacin (Noroxin®) - PO
Ciprofloxacin (Ciprobay®) – PO, IV
Newer FQs
Levofloxacin (Tavanic®) – PO, IV
Gatifloxacin (Tequin®) – PO, IV
Moxifloxacin (Avelox®) – PO, IV
Gemifloxacin (Factive®) – PO
FQs Spectrum of Activity
• Gastrointestinal – 5 %
Nausea, vomiting, diarrhea, dyspepsia
• Central Nervous System
Headache, agitation, insomnia, dizziness, rarely,
hallucinations and seizures (elderly)
• Hepatotoxicity
LFT elevation (led to withdrawal of trovafloxacin)
• Phototoxicity (uncommon with current FQs)
More common with older FQs (halogen at position 8)
• Cardiac
Variable prolongation in QTc interval
Led to withdrawal of grepafloxacin, sparfloxacin
FluoroquinolonesAdverse Effects
• Articular Damage
Arthopathy including articular cartilage damage,
arthralgias, and joint swelling
Observed in toxicology studies in immature dogs
Led to contraindication in pediatric patients and
pregnant or breastfeeding women
Risk versus benefit
• Other adverse reactions: tendon rupture, dysglycemias,
hypersensitivity
Prophylactic Antibiotics