Alam 2018
Alam 2018
Alam 2018
Original papers
A R T I C L E I N F O A B S T R A C T
Keywords: The estimation of actual crop evapotranspiration (ETc) from any given land cover or crop type is important for
Crop coefficient (Kc) irrigation water management and agricultural water consumption analysis. The main parameter used for such
Normalized Difference Vegetation Index estimations is the crop coefficient (Kc). Spectral reflectance indices, such as the normalized difference vegetation
(NDVI) index (NDVI) and the crop coefficient of a specific crop or pasture canopy are important indicators of ‘vigour’,
Evaporation chamber
namely the photosynthetic activity and rate of biomass accumulation. Measuring both parameters simulta-
neously, with a view to understanding how they interact, or for creating optical, surrogate indicators of Kc is very
difficult because Kc itself is difficult to measure. In this study a portable enclosed chamber was used to measure
ETc of a pasture and subsequently calculated Kc from reference evapotranspiration (ETo) data derived from a
nearby automatic weather station (AWS). Calibration of the chamber confirms the suitability of the device to
measure the amount of water vapour produced by local plant evapotranspiration, producing a calibration factor
(C) close to 1 (C = 1.02, R2 = 0.87). The coincident NDVI values were measured using a portable active optical
sensor. In a test involving a pasture (Festuca arundinacea var. Dovey) at two different stages of growth in two
consecutive growing seasons, the NDVI and crop coefficients were observed to be strongly correlated (R2 = 0.80
and 0.77, respectively). A polynomial regression (R2 = 0.84) was found to be the best fit for the combined,
multi-temporal Kc-NDVI relationship. The main advantages of this method include the suitability of operating at
a smaller scale (< 1 m2), in real time and repeatability.
⁎
Corresponding author.
E-mail address: [email protected] (M.S. Alam).
https://doi.org/10.1016/j.compag.2018.02.008
Received 28 August 2017; Received in revised form 4 January 2018; Accepted 8 February 2018
0168-1699/ © 2018 Elsevier B.V. All rights reserved.
M.S. Alam et al. Computers and Electronics in Agriculture 147 (2018) 12–17
green fractional cover (fc) using a predefined formula, and finally to Kcb et al., 2008; Macfarlane and Ogden, 2012; McJannet et al., 1996), ve-
based on lysimeter experiments conducted by Bryla et al. (2010). Allen getated rangeland (Stannard and Weltz, 2006), as well as in some
et al. (2010) explored the linear relationships between ETrF (synon- pastures and emerging crops (McLeod et al., 2004; Stannard, 1988).
ymous with the crop coefficient Kc) and top of atmosphere NDVI from The dimension of the containment chamber, instrumentation and pro-
two years of data for Southern Idaho using Mapping Evapotranspiration cedures vary depending on the purpose and circumstances but the
at high Resolution with Internalized Calibration (METRIC) energy principle of instantaneous ET measurement is similar in each study.
balance process to near-real time estimates of ETrF from Landsat or Careful calibration and device operation is important for successful use
other satellite imagery. In both cases the concurrent measurement of of this technique. When operated correctly, the performance of this
related parameters could not be attained, and reliance has been placed chamber compared with other theoretical approaches of measuring ET
on secondary data or pre-defined formula. Bausch and Neale (1987) has demonstrated the potential value of using such methods for com-
used a hand-held radiometer and electronic module to measure the pleting evapotranspiration measurements (McLeod et al., 2004). To
radiance and found that the seasonal NDVI curve was curvilinear and date these devices have only been used to understand the water demand
resembled the basal crop coefficient (Kb) curve for corn. Duchemin and evapo-transpiration dynamics of the species in question.
et al. (2006) found linear relationships between NDVI and Kcb with a With the availability of high spatial and temporal resolution mul-
good accuracy ( ± 15%) using high spatial resolution Quickbird sa- tispectral satellite systems, and the emergence of ultra-high spatial re-
tellite imagery to measure top-of-atmosphere NDVI and in-situ eddy solution aerial platforms such as drones and miniature multispectral
covariance instrumentation to calculate the actual evapotranspiration. imaging devices as their payloads, there is considerable interest in
An ET-NDVI relationship for urban vegetation was explored by Nouri being able to conveniently derive VI-Kc relationships so that these
et al. (2014) from high spatial resolution WorldView-2 imagery and systems can be used for irrigation scheduling. The specific objective of
systematic evaluation of evapotranspiration through observational- this study is to bring together the two sets of measurements; namely
based approaches. The experimental site of Nouri et al. (2014) includes spectral reflectance index measurements and Kc measurements into a
cover grass that is similar to pasture, however, because of the presence single field measurement process for determining VI- Kc relationship. In
of trees, shrubs and water bodies in the experimental area the re- this case we demonstrated the technique for a pasture species of im-
lationship derived cannot be exactly the same as pasture. All of these portance to grazing industries worldwide (Rahman et al., 2014).
existing methods of linking NDVI to Kc are based on predominantly
satellite based measurement of NDVI and evapotranspiration or Kc
2. Materials and methods
measured or collected from secondary sources.
Advances in satellite imaging systems, and data and information
2.1. Instrumentation and calibration
delivery systems is seeing a growth in interest of irrigation scheduling
in a more reliable way. However, many of the existing, spectral re-
A schematic diagram of the ET dome and instrumentation is shown
flectance index-Kc (or −Kcb) relationships have been derived where
in Fig. 1 and is based upon the designs of (McLeod et al., 2004;
spatial scale and sensor resolution are not matched, and they are only
Stannard, 1988). The diameter of the clear perspex dome is 0.68 m and
known for a limited number of agricultural-relevant plant canopies.
the height is 0.36 m including a 2 cm thick foam-rubber ring on its base
There is currently no ‘simple’ method of directly relating the spec-
to ensure a good seal with the canopy/ground surface. A humidity
tral reflectance index of choice with Kc. All previous research points to a
sensor (Vaisala Oy, HMP 35A, Helsinki) and a thermocouple (ICT In-
statistically robust relationship between the parameters but the cali-
ternational, Australia) were mounted inside the dome to monitor the
bration methods are optimal for a gross measurement of regional scale
change in the air humidity and temperature, respectively and both
evapotranspiration. Moreover, accessing satellite based NDVI data for
sensors were connected to a data logger (SM1E904, ICT International,
any calibration is constrained to the revisit time of the satellite and this
Australia) which was able to record the data at one second interval. The
can be from few days to weeks (e.g. 16 days for Landsat), further ex-
humidity sensor was specifically chosen for its fast response time. Two
acerbated by weather. While depending on satellite data for a decision
fans of 80 mm diameter were used to mix the air and accumulating
making such as irrigation scheduling is problematic in its own right, in
water vapour uniformly inside the dome. Whenever the dome was
the case of crop or pasture management, any relationship between a VI
positioned over a ‘target’ surface, the fans were running continuously
and ET may also vary with often rapidly-evolving plant growth.
while the dome was positioned to ensure rapid mixing of the vapour
Irrespective of the delivery of any decision support tools for, say, irri-
and presentation of that mixed vapour to the overhead environmental
gation management, there is a need for a consistent and time-efficient
sensors.
means of creating relationships between spectral VIs and ET, which is
A crucial first step in dome deployment is calibrating the dome to
convenient, portable and suitable for varying skill levels of the user.
ensure that water vapour accumulation, as measured by the environ-
Handheld, active, optical reflectance sensors like GreenSeeker®
mental sensors, is the same as water lost to the atmosphere contained in
(Trimble, Sunnyvale, California, USA) or the CropCircle® (Holland
Scientific Inc., Lincoln, NE, USA) can read the NDVI of the target plant
canopy instantly regardless of the environmental conditions (Rahman
et al., 2014). It is desirable to be able to measure the crop evapo-
transpiration coincident with such measurements; in situ, at the same
spatial scale and at very near, if not at the same time. One solution is
the use of a portable hemispherical evaporation chamber for directly
recording evapotranspiration in situ (Stannard, 1988). This is a con-
venient method requiring only a few minutes onsite to set up and less
than a minute of measurement time (McLeod et al., 2004). Responsive
sensors are mounted inside the chamber to record temperature and
humidity so that the vapour generated from the target area can be ac-
curately measured from the change in vapour concentration inside the
chamber when the area covered by the chamber and the air inside
mixed uniformly with the help of a fan. A number of studies have used
devices to contain the atmosphere over plant targets to quantify eva-
Fig. 1. Schematic representation of the ET dome fitted with necessary accessories.
potranspiration in conditions ranging from forest to desert (Garcia
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M.S. Alam et al. Computers and Electronics in Agriculture 147 (2018) 12–17
the dome from a given source (for example the plant canopy). The basic
principle of calibration was to produce water vapour inside the dome at
a known rate and compare this value with the calculated rate of ac-
cumulated water vapour inside the dome using the environmental
sensors (McLeod et al., 2004; Stannard, 1988). This was achieved by
placing a small, open-top container of water on the digital balance
(PA413C, Ohaus, USA, Precision balance) inside the dome. The rate of
evaporation from the container was varied (0.0007–0.02 g/s) by
changing the water temperature and the diameter of the open portion of
the water container. The exact water temperature and container di-
mensions required to achieve this was determined by trial and error
using an unenclosed container in the laboratory. The balance was
connected to a laptop computer to record the weight of the water at a
1 s interval. On placing the dome over the water container, the hu-
midity and temperature data were used to calculate the vapour density
(g/m3) inside the dome using Eqs. (1) and (2), which was then multi-
plied by the dome volume to yield the quantity of vapour (g) inside the
Fig. 2. Collection of field data with the evaporation dome.
dome at any moment.
0.622RH(%)es ⎞
Vapour Density, ρv (g/m3) = ⎛ ⎜ ⎟× 10 experiment the data was collected in a 30 min window close to noon
⎝ d ( T+ 273.15) ⎠
R (1) under clear sky conditions with the help of portable evaporation dome
and NDVI sensor. Fig. 2 shows the dome in operation in experimental
17.50T ⎞
Saturated vapour pressure, es (Pa) = 6.11f(p)exp ⎛ site.
⎝ 241.2+T ⎠ (2)
For each ET measurement, the dome was lowered onto the ground
Here RH (%) is the relative humidity, T is the temperature in °C, Rd with the fans running at the selected speed. The target was covered by
is the gas constant (287.04 J/kg K), 0.622 is a factor derived from the the dome for approximately 60–90 s and the temperature and humidity
ratio of molecular weight of water and of dry air (g/mol), es is the of the enclosed atmosphere recorded as per the initial laboratory cali-
saturated vapour pressure (Pa) and f(p) is related to atmospheric bration. Again the calculated accumulation of vapour which was
pressure which is assumed to be a constant value of 100.47. plotted against time and the slope (M) of the plotted curve (g/s) used to
The increase in the amount of vapour inside the dome as inferred calculate the instantaneous crop evapotranspiration. The crop evapo-
from the environmental sensors was plotted against time and the slope transpiration (ETc) in mm/hr was than calculated using the equation of
of the fitted line was used to determine the rate of accumulation of (Stannard, 1988):
moisture in the dome (g/s). The rate of water lost from the water
MVC
container (g/s) was plotted against the rate of vapour accumulation in Crop Evapotranspiration (ETc) = 3.6 mm/hr
A (3)
the dome and the slope of the fitted line, passing through the origin was
taken as the dome calibration factor (C). Mixing of airflow is an im- where M is the slope of the curve, C is the calibration factor derived
portant consideration in the veracity of measurements to estimate va- from the laboratory calibration, A is the area of the target crop covered
pour accumulation in the dome. Three different fan speeds, producing by the dome (m2) and 3.6 is the unit conversion factor.
an average air velocity in the vicinity of the fan face of 1.88 m/s (Low), The reference crop evapotranspiration (ETo) value, necessary to
3.4 m/s (Medium) and 5.36 m/s (High), respectively were tested during calculate the associated Kc value for each set of measurements was
the calibration process and the selection of final fan speed for sub- collected from the nearby SMART Farm automatic weather station
sequent field use was determined from the accuracy of the environ- (AWS). The AWS was configured to measure ETo every 10 min using an
mental sensor data to explain the accumulation of the water into the array of environmental sensors and the Penman-Monteith equation. The
atmosphere contained inside the dome. maximum time interval between any field measurements of ETc and the
ETo values used to calculate Kc was 5 min.
2.2. Field data collection and analysis Immediately following a dome measurement of ETc, the NDVI of the
same target sample was recorded using handheld GreenSeeker®
Field campaigns were conducted to collect ET and NDVI data from (Trimble, Sunnyvale, California, USA) following the recommended in-
pasture on the University of New England SMART Farm (NSW, dustry protocol.
Australia; Latitude −30.481088° S, Longitude 151.644757° E) during
the peak summer pasture growing seasons of November 2016 – 3. Results
February 2017 and November 2017 to December 2017. The pasture
species of interest was Tall Fescue (Festuca arundinacea var. Dovey). A 3.1. ET instrumentation calibration and data processing
biomass measuring site was prepared, measuring 50 m long and 20 m
across. This site contained ten 10 m × 10 m plots comprising of 3 re- An example plot of the calculated vapour accumulation over an
plicates of nitrogen applied at ‘low’, ‘medium’ and ‘high’ rates; suffi- open evaporating dish at a fan speed of 5.36 m/s is given in Fig. 3.
cient to achieve discernible variations in biomass accumulation, and a As can be seen in Fig. 3, when the dome is lowered over the target,
single plot of exposed soil. In preparation for the field measurements of there is a short delay (∼5 s) while the contained atmosphere stabilizes
both growing seasons, the site was first mown to a height of approxi- and the moist air from adjacent to the plant canopy is circulated to the
mately 5 cm high, and then regularly irrigated to promote vigorous overhead atmospheric sensors (denoted as point ‘A’. The point identi-
pasture growth. A first set of field measurements was undertaken two fied as ‘B’ in Fig. 3 can be considered the point at which it can be
weeks after mowing when the pasture was in its initial growing stage assumed that the sensors are responding to accumulating moisture.
and the soil was only partially covered (biomass ranging from 589 to However with prolonged containment, the accumulating moisture in-
2364 kg DM/ha). A second set of data was collected at the third week side the dome reduces the vapour pressure deficit which also reduces
after mowing when the pasture had achieved complete ground cov- evapotranspiration (for example Eamus and Shanahan (2002) and
erage (biomass ranging from 1581 to 3200 kg DM/ha). During each Ocheltree et al. (2014)) and the rate of accumulation decreases beyond
14
M.S. Alam et al. Computers and Electronics in Agriculture 147 (2018) 12–17
0.6
Calculated vapour inside the chamber (g)
3
y = 0.04x + 0.99 Kc = (0.56 ± 0.05) x NDVI + (0.10 ± 0.03)
2.5 R² = 0.99 R² = 0.80
0.5
2
C
Kc
1.5 0.4
B
1
A
0.3
0.5
0.2
0
0 10 20 30 40 50 0.25 0.35 0.45 0.55 0.65 0.75
Time (s) NDVI
Fig. 3. Example of progressive water vapour accumulation over an open evaporating dish (a)
at fan speed = 5.36 m/s. 0.9
Kc
goal but the simple act of lowering the dome onto the target disrupts
airflow over the sensors, and time is required for the moisture-laden air 0.5
to circulate to the sensors. Experience through trial and error, and a
visual examination prior to fitting the rate line to the data remains the 0.4
only viable method.
0.3
A graph of the rate of vapour production from the water container,
versus the calculated rate of vapour accumulation from the combina- 0.2
tion temperature and humidity sensor data is given in Fig. 4. The slope 0.4 0.5 0.6 0.7 0.8 0.9
of the fitted, line is 1.02 (R2 = 0.87) and this is the calibration factor NDVI
(C). This plot was generated using the High fan speed. The Low fan
speed (Figure not shown) caused poor mixing and presentation of the
(b)
vapour to the overhead temperature and humidity sensors; resulting in Fig. 5. Graphs of crop coefficient (Kc) versus measured NDVI for Tall Fescue pasture at (a)
a calibration factor of 1.58 (R2 = 0.82). The medium fan speed (also 2 and (b) 3 weeks post mowing under irrigated conditions. The uncertainties in each
not shown), while improving the mixing and presentation, yielding an regression parameter (slope and intercept) are included. Fan speed = 5.36 m/s.
improved calibration factor C = 1.07 (R2 = 0.99) similar to Macfarlane
and Ogden (2012) (C = 1.08, R2 = 0.97) in their improved evaporation water container with a wire mesh reduced noise in the balance readings
dome. and produced a calibration factor of 1.02 (R2 = 0.87) for the High fan
The High fan speed tested was observed to create turbulence in the speed. This noise was not evident in the subsequent field trials invol-
enclosed atmosphere and vibrated the container/balance introducing ving pasture canopies and so this fan speed (5.36 m/s) was used from
noise into the readings. It was observed that enclosing the balance and hereon in.
0.025
Rate of vapour production from water
0.015 In this study the Kc for Tall Fescue ranges from 0.25 with low
ground coverage to a maximum value of 0.90 when the pasture was
well developed and fully covered the ground surface.
0.01 Both plots in Fig. 5(a) and (b) exhibit strong linear relationship
(R2 = 0.80 & 0.77 respectively).
0.005 Data from 2016 and 2017 seasons were used to generate those plots.
However, the slopes and intercepts of Fig. 5(a) and (b) are significantly
different for the different growing stages (2 weeks and 3 weeks after
0 mowing). Interestingly when the data are combined into a single plot
0 0.005 0.01 0.015 0.02 0.025 (Fig. 6), the Kc – NDVI relationship appears continuous and non-linear,
Rate of vapour accumulation calculated from sensor data and the variance in the Kc – NDVI relationship can be explained using a
(g/s) single polynomial regression curve (R2 = 0.84).
Fig. 4. A graph of the rate of vapour production from the water container, as measured by
the progressive loss of weight of the water container using the balance, versus the cal- 4. Discussions
culated rate of vapour accumulation in the enclosed atmosphere from the combination
temperature and humidity sensor data. Fan speed = 5.36 m/s. The calibration factor (C) The complete sequence of lowering dome and acquisition of suffi-
is the slope of the fitted line passing through the origin.
cient data is less than 20 s. This performance is consistent with the
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M.S. Alam et al. Computers and Electronics in Agriculture 147 (2018) 12–17
1
evaporation term (Ke) and a leaf transpiration term (Kcb), was princi-
Kc = (1.84 ± 0.41) x NDVI2 - (1.03 ± 0.48) x NDVI + (0.42 ± 0.14)
0.9
R² = 0.84
pally governed by evaporation from the underlying soil (Ke), since the
lower-end value of approximately 0.2 observed in this work (assumed
0.8
to be Ke) is consistent with those simulated values of Zeleke and Wade
0.7 (2012) for crops in south eastern Australia.
0.6 Er-Raki et al. (2007) reported that the Kcb may begin to saturate
Kc
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M.S. Alam et al. Computers and Electronics in Agriculture 147 (2018) 12–17
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