Epigenetics: Epigenesis (Biology) Developmental Robotics Epigenetics (Journal) Epigenetic (Earth Sciences)

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Epigenetics

From Wikipedia, the free encyclopedia


For the development of an organism, see Epigenesis (biology). For epigenetics in robotics,
see Developmental robotics. For the scientific journal, see Epigenetics (journal). For earth science
concepts labelled "epigenetic", see Epigenetic (earth sciences).

Epigenetic mechanisms

Epigenetics are stable heritable traits (or "phenotypes") that cannot be explained by changes
in DNA sequence.[1] The Greek prefix epi- (Greek: - over, outside of, around)
in epigenetics implies features that are "on top of" or "in addition to" the traditional genetic basis for
inheritance.[2] Epigenetics often refers to changes in a chromosome that affect gene activity
and expression, but can also be used to describe any heritable phenotypic change that doesn't
derive from a modification of the genome, such as prions. Such effects
on cellular and physiological phenotypic traits may result from external or environmental factors, or
be part of normal developmental program. The standard definition of epigenetic requires these
alterations to be heritable,[3][4] either in the progeny of cells or of organisms.
The term also refers to the changes themselves: functionally relevant changes to the genome that
do not involve a change in the nucleotide sequence. Examples of mechanisms that produce such
changes are DNA methylation and histone modification, each of which alters how genes are
expressed without altering the underlying DNA sequence. Gene expression can be controlled
through the action of repressor proteins that attach to silencer regions of the DNA. These epigenetic
changes may last through cell divisions for the duration of the cell's life, and may also last for
multiple generations even though they do not involve changes in the underlying DNA sequence of
the organism;[5] instead, non-genetic factors cause the organism's genes to behave (or "express
themselves") differently.[6]
One example of an epigenetic change in eukaryotic biology is the process of cellular differentiation.
During morphogenesis, totipotent stem cells become the various pluripotent cell lines of the embryo,
which in turn become fully differentiated cells. In other words, as a single fertilized egg cell
the zygote continues to divide, the resulting daughter cells change into all the different cell types in
an organism, including neurons, muscle cells, epithelium, endothelium of blood vessels, etc., by
activating some genes while inhibiting the expression of others.[7]
Historically, some phenomena not necessarily heritable have also been described as epigenetic. For
example, epigenetic has been used to describe any modification of chromosomal regions,
especially histone modifications, whether or not these changes are heritable or associated with a
phenotype. The consensus definition now requires a trait to be heritable for it to be considered
epigenetic.[4]

Contents
[hide]

1Definitions

o 1.1Historical

o 1.2Contemporary

2Molecular basis

3Mechanisms

o 3.1Covalent modifications

o 3.2RNA transcripts

o 3.3MicroRNAs

o 3.4mRNA

o 3.5sRNAs

o 3.6Prions

o 3.7Structural inheritance

o 3.8Nucleosome positioning

4Functions and consequences

o 4.1Development

o 4.2Transgenerational

5Epigenetics in bacteria

6Medicine

o 6.1Twins

o 6.2Genomic imprinting
o 6.3Cancer

7Psychology and psychiatry

o 7.1Early life stress

o 7.2Addiction

o 7.3Anxiety

o 7.4Depression

o 7.5Fear conditioning

8Research

9Caution

10In popular culture

11See also

12References

13External links

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