Cotton Pakjas
Cotton Pakjas
Cotton Pakjas
Agro-Climatology Lab., Department of Agronomy, University of Agriculture, Faisalabad, Pakistan; 2Plant Breeding
& Genetics Division, Nuclear Institute for Agriculture and Biology (NIAB) Faisalabad, Pakistan; 3Cotton Research
5
Institute, Sahiwal, Pakistan; 4University College of Agriculture, University of Sargodha; AG Weathernet,
Washington State University, USA
*
Corresponding author's e-mail: [email protected]
CSM-CROPGRO-Cotton Model under DSSAT V 4.0.2.0 has been extensively tested and validated in many studies, mainly
in United States. The objective of this study was to test and validate this model in three cotton growing regions of Pakistan
(Faisalabad, Multan and Sahiwal) for dynamic simulation of development, growth and seed cotton yield of four cotton
cultivars (CIM-496, CIM-506, NIAB-111 and SLH-284) at varying nitrogen increments (50, 100, 150 and 200 kg ha-1) sown
at different timings (20 May and 10 June). The model was first calibrated with data (phenology, biomass, LAI, and yield
components) collected during 2009 at all locations against the best performing treatment May 15 sowing, cv. CIM-496 and
200 kg N ha-1 (D1V1N4) in field trials. The model was then tested with data recorded against remaining thirty-one treatments
for all locations. Similarly, the data of year 2010 was used for validation. The simulated values of crop phenology (days to
anthesis and maturity) by the model were reliable with the recorded data, with root mean square error (RMSE) less than 2
days during both years. Although RMSE values for LAI approached higher than 1 in many of the treatments, these values for
total dry matter and seed-cotton yield were reasonably good (367 to 497 kg ha-1and 122 to 227 kg ha-1, respectively). There is
a dire need to assess impact of climate variation on seed cotton yield under various climatic regions of Pakistan to ensure
fiber quality and yield in future.
Keywords: Gossypium hirsutum L., CSM-CROPGRO-Cotton, simulation, crop growth, phenology
INTRODUCTION
Cotton is the most important cash crop and plays a vital role
in the economy of Pakistan. It accounts for 7.8% of value
added in agriculture and 1.6% of GDP (Government of
Pakistan, 2012). The cotton plant due to its narrow range of
ecological adaptability is very much influenced by the
climatic conditions and various agronomic factors, such as
sowing time, genotypes and nitrogen fertilization. A great
number of studies have been conducted on the effect of these
factors on growth and yield of seed-cotton in Pakistan
(Soomro et al., 2001; Akhtar et al., 2002; Ali et al., 2004;
Arshad et al., 2007; Jawdad et al., 2012; Nazar et al., 2012;
Shabbir et al., 2012). However, to study the interaction of all
these management strategies in different agro-ecological
conditions needs long and costly field experiments.
Crop growth models can assist in the synthesis of research
understandings about the interaction of genetics,
physiological and the environmental interaction across
disciplines and organization of data and are important tools
for agronomic management strategy evaluation (Jones et al.,
2003; Hoogenboom et al., 2004; Boote et al., 2010, Wajid et
al., 2013; Mubeen et al., 2013). During the last decade, these
models have been used extensively in agriculture to simulate
crop responses to different abiotic factors. Recently many
mechanistic simulations have been reported on both the
development and yield of cotton crop from sowing to
maturity in response to nonspecific site environment (Hima
et al., 2004; Kakni et al., 2005). The cotton boll maturation
period module in these models took solar radiation and N
nutrition factors into account in addition to temperature and
variety maturity profile. Crop growth models take
parameters in consideration like cultivar characteristics,
minimum temperature, maximum temperature, solar
radiation and crop managements factors (Mahamood et al.,
2003; Hoogenboom et al., 2011). Li et al. (2009) used the
new semi empirical model to simulate the cotton leaf and
boll nitrogen concentration and also worked on direct
indicator of nitrogen fertilizer effect on growth, development
and cotton seed. The Cropping System Model (CSM)CROPGRO-Cotton model is part of the suite of crop
simulation models that encompass the Decision Support
System for Agro technology Transfer (DSSAT) (Jones et al.,
2003; Hoogenboom et al., 2004). The model simulates
Wajid, Ahmad, Hussain, Rahman, Khaliq, Mubeen, Rasul, Bashir, Awais, Iqbal, Sultana & Hoogenboom
growth, development, and yield of cotton for different
weather and soil conditions and management practices (Ortiz
et al., 2009). CROPGRO (DSSAT) is one of the first
packages that modified weather simulation generators/or
introduced a package to evaluate the performance of models
for climate change situations (Murthy, 2004).
CROPGRO-Cotton is a newly developed crop model and
has many parameters (Pathak et al., 2009). In Pakistan,
studies on the use of crop models in cotton for evaluation
and validation have not been reported. The present study
was, therefore, conducted with the objectives to evaluate
CROPGRO-Cotton model for growth, development and seed
cotton yield, and to validate model under various climatic
conditions with independent set of data.
MATERIALS AND METHODS
Two field experiments at three locations Post Graduate
Agricultural Research Station (PARS) Faisalabad (31.26N,
73.06E), Cotton Research Station (CRS) Sahiwal (31.58N,
72.20E) and Central Cotton Research Institute (CCRI)
Multan (30.12N, 71.26E) were conducted to predict the
phenology, growth and development of cotton (Gossypium
hirsutum L.) productivity in Punjab, during 2009 and 2010.
The experiment was conducted in split-split plot design in
both seasons at three locations. There were two sowing dates
D1=20 May and D2=10 June in main plots, four cultivars
Viz. V1=CIM-496, V2=CIM-506, V3=NIAB-111and
V4=SLH-284 in sub plots and four nitrogen levels N1=50 kg
ha-1, N2=100 kg ha-1 (farmers practice, control), N3=150 kg
ha-1, N4 =200 kg ha-1 in sub-sub plots. Each experiment
consisted of three replications with a net plot size of 3x10m.
Crop husbandry: The crop husbandry operations during
both the seasons were kept normal according to the
recommendations of Agriculture Department except
varieties, sowing dates and nitrogen levels which were
applied according to the treatments under study. The crop
was sown on due dates i.e. on 20th, May and 10th June
uniformly at 75 cm apart, using bed-furrow method with
seed rate 25 kg ha-1. Thinning was completed after crop
emergence to maintain uniform plant-to-plant distance of 30
cm. Nitrogen was applied in the form of urea in two splits,
50 kg ha-1 at sowing, in first split to all experimental units
and remaining in second split according to treatments at
flower initiation before15th August in both seasons. All other
agronomic practices such as irrigation, weeding, plant
protection measures and earthing up etc. were kept normal
and uniform for all the treatments.
Crop growth modeling: Field data collected from the
experiments during 2009 and 2010 growing seasons was
used for calibration and validation of CROPGRO-Cotton
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PA0001
PA0002
PA0003
PA0004
FLSH
4
18.0
18.0
18.1
18.2
FLSD
5
18.0
18.0
18.1
18.2
SD- FL-LF LFMAX SLAVR SIZLF XRFT WTPSD SFDUR SDPDV PODUR
PM
6
7
8
9
10
11
12
13
14
15
59.7 99.99
3.99
188
265
0.850
0.183
41.9
27
3.9
60.9 90.00
4.00
188
266
0.850
0.189
38.0
27
3.8
60.0 99.99
4.09
188
287
0.840
0.188
39.0
27
3.9
66.6 110.99
3.99
189
290
0.780
0.180
36.0
27
3.8
CSDL= Critical Short Day Length below which reproductive development progresses with no day length effect (for short day plants)
PPSEN = Slope of the relative response of development to photoperiod with time (positive for short day plants) (1/hour)
EM-FL = Time between plant emergence and flower appearance (R1) (photo thermal days)
FL-SH = Time between first flower and first pod (R3) (photo thermal days)
FL-SD = Time between first flower and first seed (R5) (photo thermal days)
SD-PM = Time between first seed (R5) and physiological maturity (R7) (photo thermal days)
FL-LF = Time between first flower (R1) and end of leaf expansion
LFMAX = Maximum leaf photosynthesis rate at 30 C, 360 vpm CO 2, and high light (mg CO2/m2-s)
SLAVR = Specific leaf area of cultivar under standard growth conditions (cm2/g)
SIZLF= Maximum size of full leaf (three leaflets) (cm2)
XFRT = Maximum fraction of daily growth that is partitioned to seed + shell
WTPSD = Maximum weight per seed (g)
SFDUR = Seed filling duration for pod cohort at standard growth conditions (photothermal days)
SDPDV = Average seed per pod under standard growing conditions (#/pod)
PODUR = Time required for cultivar to reach final pod load under optimal conditions (photothermal days)
641
Wajid, Ahmad, Hussain, Rahman, Khaliq, Mubeen, Rasul, Bashir, Awais, Iqbal, Sultana & Hoogenboom
Model evaluation for second year also remained satisfactory
for early and late planting in which prediction remained 2
days and 1 day more in early vs late plantings. The early
sown crop matured in 175 days vs late sown with 149 days
according to model simulations with corresponding observed
values of 173 days and 148 days in 2010. Cultivar CIM-496
and NIAB-111 gave same trend for days taken to maturity
between observed and simulated (161 vs. 163) and other two
cultivars CIM-506 and SLH-284 also took same number of
days to maturity (160 vs. 162). Mean percent difference
during 2010 was 1.16 showing acceptable limit. Simulated
and observed maturity dates were very close to 1.1 line for
both the years having higher values of R2 (0.99) showed the
goodness of the model during evaluation and validation
(Fig. 2).
Leaf area index (LAI): During 2009, model prediction for
earlier sown crop was higher (3.82) than late sown with
canopy development of 3.31. Model predicted higher (4.42)
LAI @ 200 kg N ha-1 than at low rate of 50 kg N ha-1 (3.18).
As regards cultivars, SLH-284 produced higher leaf area
index over rest of the cultivars. RMSE ranged from 0.83 to
1.50 during this year (Table 4).
Table 3. Comparison between simulated and observed days to maturity at different nitrogen levels, sowing dates
and cotton cultivars during year 2009 and 2010
Treatment
Calibration (2009)
Validation (2010)
Obs.
Sim.
Error (%)
RMSE
Obs.
Sim.
Error (%)
RMSE
May Sown
171
173
1.17
1.32
173
175
1.16
1.31
June Sown
149
151
1.34
1.14
148
149
0.68
1.33
N 50 kg ha-1
163
164
0.61
1.21
162
164
1.23
1.42
N 200 kg ha-1
157
158
0.64
1.54
158
160
1.27
1.34
CIM-496
160
161
0.63
1.07
161
163
1.24
1.17
CIM-506
161
162
0.62
0.98
160
162
1.25
1.09
NIAB-111
160
162
1.25
1.21
161
163
1.24
1.19
SLH-284
159
160
0.63
1.42
160
162
1.25
1.24
MPD
0.86
1.16
68
Days to anthesis (2009)
Observed
66
64
62
60
58
58
60
62
64
66
68
58
60
62
64
66
68
Simulated
Simulated
Figure 1. Relationship between simulated and observed days to anthesis for cotton cultivars during growing
season of 2009 and 2010
642
180
Days to Maturity (2009)
Observed
170
160
150
150
160
170
180
Simulated
150
160
170
180
Simulated
Figure 2. Relationship between simulated and observed days to maturity for cotton cultivars during growing
season of 2009 and 2010
When CROPGRO-Cotton model was validated with 2010
data, percentage error in observed and simulated LAI was
higher than 2009 in some of the treatments. For instance, the
model showed 13.88, 15.80 and 11 % errors in planting date
May sown, N rate of 50 kg ha-1 and cultivar CIM-496;
however, the % error for rest of the treatments ranged from
2.62 to 6.09. Similarly MPD in this year was higher (7.80)
compared to 2009 (1.61). RMSE during 2010 ranged from
0.57 to 1.28 for different treatments. Relationship between
simulated and observed LAI for all studied treatments
demonstrated in Fig.3, indicating strong association.
Total dry matter (TDM kg ha-1): The data in Table 5
indicated a significant and positive correlation among
simulated and observed TDM during both the season at all
three sites. Pooled date for three sites showed that model
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Wajid, Ahmad, Hussain, Rahman, Khaliq, Mubeen, Rasul, Bashir, Awais, Iqbal, Sultana & Hoogenboom
Table 5. Comparison between simulated and observed total dry matter (kg ha -1) at different nitrogen levels, sowing
dates and cotton cultivars during year 2009 and 2010
Treatment
Calibration (2009)
Validation (2010)
Obs.
Sim.
Error (%)
RMSE
Obs.
Sim.
Error (%)
RMSE
11650
11675
0.21
496.67
10871
11594
6.65
449.00
May Sown
9871
10206
3.39
391.00
9451
9873
4.47
405.33
June Sown
8957
9149
2.14
393.00
8855
9000
1.64
367.33
N 50 kg ha-1
11858
12684
6.97
479.67
11757
11895
1.17
411.67
N 200 kg ha-1
10168
10710
5.33
417.00
10085
10332
2.45
398.67
CIM-496
9833
10145
3.17
377.33
9816
10558
7.56
398.33
CIM-506
10535
10843
2.92
405.67
10555
10995
4.17
396.67
NIAB-111
10647
10864
2.04
407.00
10620
11002
3.60
401.33
SLH-284
3.27
3.96
MPD
4.5
Leaf Area Index (2009)
Observed
4.0
3.5
3.0
2.5
2.5
3.0
3.5
4.0
4.5
2.5
3.0
3.5
Simulated
4.0
4.5
Simulated
Figure 3. Relationship between simulated and observed leaf area index (LAI) for cotton cultivars during growing
season of 2009 and 2010
13000
Total Dry Matter (2009)
Observed
12000
11000
10000
9000
8000
8000
9000
10000
11000
12000
13000
8000
Simulated
9000
10000
11000
12000
13000
Simulated
Figure 4. Relationship between simulated and observed total dry matter (Kg ha -1) for cotton cultivars during
growing season of 2009 and 2010
Seed cotton yield: The data presented in Table 6 shows that
the May sown crop produced seed cotton yield of 2260 kg
ha-1 whereas June sown produced 1765 kg ha-1 according to
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Obs.
1692
1430
1370
1664
1523
1582
1586
1555
RMSE
178.67
127.67
122.00
178.00
163.00
169.67
168.33
167.67
2400
Seed cotton Yield (2009)
Observed
2200
2000
1800
1600
1400
1400
1600
1800
2000
1200
2400
2200
1400
1600
1800
2000
2200
2400
Simulated
Simulated
Figure 5. Relationship between simulated and observed seed cotton yield (kg ha -1) for cotton cultivars during
growing season of 2009 and 2010
%age range of 3.17 to 5.33. Similarly all the cultivars
showed %age difference of 5.21 to 7.06 which is an
acceptable limit.
Model evaluation for second year also remained satisfactory
for early (with RMSE of 179 kg ha-1) and late planting (with
RMSE of 128 kg ha-1). Increasing nitrogen rates increased
the RMSE value (122 to 178 kg ha-1). In case of cultivars,
the range of RMSE was very consistent for the four cultivars
(163 to 173 kg ha-1). Figure 4 illustrates the scatter of
simulated and observed seed cotton yields around the
regression line. There was strong and positive correlation
between observed and simulated data and common
regression accounted for 99 % variance in the data (Fig. 5).
DISCUSSION
Many scientists used Cropping System Model (CSM)CROPGRO-Cotton for the simulation of growth,
development, and yield of cotton for different weather and
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Wajid, Ahmad, Hussain, Rahman, Khaliq, Mubeen, Rasul, Bashir, Awais, Iqbal, Sultana & Hoogenboom
reached flowering stage 62-66 days after sowing in all
treatments and the observed days ranged from 61-65 days
which indicated that model was fit and worked well under
our environmental conditions. Similarly, validation of model
during year 2010 shows that crop reached at anthesis stage
in 60-67 days after sowing. RMSE values indicated that
model worked well for simulation under determined set of
cultivar coefficients.
In case of days to maturity, mean percent difference (MPD)
of 0.86 during calibration and MPD of 1.16 was found
during evaluation. The crop which was applied N @ 50 kg
ha-1 matured 2 days earlier over treatment with N application
of 200 kg ha-1. In general, error between simulated and
observed days to maturity was more at higher levels of
nitrogen application (200 kg ha-1) than lower level (50 kg ha1
). Li et al. (2009) worked on a simple process based cotton
model found that the simulated values of boll maturation
period were very consistent with the observed values, with
root mean square error (RMSE) lower than 3 days.
Model predicted higher (4.42) LAI @ 200 kg N ha -1 than at
low rate of 50 kg N ha-1 (3.18). Similarly when CROPGROCotton model was validated with 2010 data, %age error in
observed and simulated LAI was higher than 2009 in some
of the treatments. Similar results were found by Zamora et
al. (2009) who reported that LAI was underestimated in the
more shaded treatment rows 4 and 8. They further suggested
that additional research is needed to improve the ability of
model to simulate LAI under shading conditions.
The model overestimated TDM than the observed values
indicating that there is a potential of producing more TDM
under these sets of agro-ecological conditions. Percent
difference increased to 6.97 % at higher fertilizer rates (200
kg N ha-1) than lower 50 kg N ha-1 with percent error of 2.14.
Model validation with independent set of data from three
sites in second year was also good with MPD of 3.96%.
These results are in line with Ortiz et al. (2009) they
reported that CROPGRO-Cotton simulated biomass with
error range of 6% to 18.4%. Similarly Zamora et al. (2009)
found that the model provided a close agreement between
measured and simulated biomass both in 2001 and 2002 (R 2
= 0.95 and R2 = 0.92, respectively).
The model simulated seed cotton yield reasonably well with
error percentage of 3.17 to 7.06 during 2009 having RMSE
values 134.67 to 227.00 kg ha-1 in all the treatments of
sowing date, nitrogen levels and cultivars. Similarly during
2010, error %age in the prediction of seed cotton yield was
in the range of 1.64 to 6.43 with RMSE of 122.00 to 178.67
kg ha-1. The MPD was 5.30 and 4.38 during 2009 and 2010,
respectively. Cammarano et al., (2011) found that lint yield
was well simulated for all the treatments (Root Mean Square
Error 100 kg ha-1 for the 2008 growing season and 254 kg
ha-1 for the 2009 growing season).When the model was run
in different locations between south east Queensland and
northern New South Wales it accurately simulated cotton
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