Original Article

Long-Term Use of Valproic Acid in US Veterans Is Associated

With a Reduced Risk of Smoking-Related Cases of Head and
Neck Cancer
Hyunseok Kang, MD, MPH1; Theresa W. Gillespie, PhD2,3,4; Michael Goodman, MD, MPH5; Seth A. Brodie, PhD2,3,6;
Mina Brandes, MD7; Maria Ribeiro, MD2,3,6; Suresh S. Ramalingam, MD3,6; Dong M. Shin, MD3,6;
Fadlo R. Khuri, MD3,6; and Johann Christoph Brandes, MD, PhD2,3,6

BACKGROUND: Epigenetic events play a major role in the carcinogenesis of tobacco-related cancers. The authors conducted a retrospective cohort study to evaluate the effects of exposure to the anticonvulsant agent valproic acid (VPA), a histone deacetylase inhibitor, on the risk of developing cancers of the lung, head and neck, prostate, bladder, and colon. METHODS: The study was based
on the 2002 through 2008 National Veterans Affairs (VA) medical SAS data set linked to the VA Central Cancer Registry. The cohort
was defined as subjects aged > 40 years who were followed in the VA system for at least 1 year for 1 of 4 diagnoses for which a VPA
indication exists (bipolar disorder, posttraumatic stress disorder, migraines, and seizures). Multivariable Cox proportional hazards
models were used to estimate hazards ratios (HR) and 95% confidence intervals (95% CI) reflecting the association between use of
VPA and cancer incidence. RESULTS: VPA use was associated with a significant reduction in the risk of cancers of the head and neck
(HR, 0.66; 95% CI, 0.48-0.92). Additional associations were noted with the duration of treatment and median VPA drug levels. No significant differences in cancer incidence were observed for cancers of the lung (HR, 1.00; 95% CI, 0.84-1.19), bladder (HR, 0.86; 95% CI,
0.64-1.15), colon (HR, 0.95; 95% CI, 0.74-1.22), and prostate (HR, 0.96; 95% CI, 0.88-1.12). CONCLUSIONS: Use of VPA is associated
C 2014 American Cancer Society.
with a lower risk of developing head and neck cancers. Cancer 2014;120:1394400. V
KEYWORDS: head and neck cancer, squamous cell carcinoma, valproic acid, histone deacetylase (HDAC) inhibition, DNA methylation.

INTRODUCTION
Epigenetic changes, involving either DNA methylation or changes in chromatin structure,1,2 are early carcinogenic events
in many cancer sites including the lung,3-5 prostate,6,7 colon,8,9 bladder,10,11 and head and neck.12-14 DNA methyltransferases (DNMTs) and histone deacetylases (HDACs) are major epigenetic mediators for which pharmacologic inhibitors
are available. In animal models, inhibition of DNMTs and HDACs has been shown to prevent the development of both
lung15 and prostate cancers.16 In addition, our own data have indicated that HDACs 1, 2, and 3 are not only associated
with increased DNMT1 protein levels in patients with lung cancer compared with normal controls, but that they are
directly responsible for stabilizing DNMT1 expression.17 Valproic acid (VPA), which has been widely used among
patients with psychiatric or neurologic disorders as a mood stabilizer or antiepileptic drug, has recently been reported to
act as a class 1 HDAC inhibitor.18 HDAC inhibition is observed at VPA concentrations as low as 40 ug/mL.17 Epigenetic
therapies such as the DNMT inhibitor azacytidine and the HDAC inhibitor vorinostat have been proven effective against
several hematologic malignancies such as myelodysplastic syndrome19-21and cutaneous T-cell lymphomas.22 A recent
phase 2 study demonstrated promise for the combination of azacytidine with the HDAC inhibitor entinostat for the treatment of patients with lung cancer.23 However, to the best of our knowledge, there is no clinical evidence to date of an association between the use of HDAC inhibitors and cancer risk.
Given the importance of epigenetic mechanisms in early carcinogenesis24 and the preclinical evidence supporting
the anticarcinogenic effects of VPA,25 we conducted a retrospective cohort study evaluating the risk of various malignancies in relation to use of VPA.

Corresponding author: Johann C. Brandes, MD, PhD, Atlanta Veterans Affairs Medical Center, Winship Cancer Institute, Emory University, 1365-C Clifton Road,
NE, Atlanta, GA, 30322; Fax: (404) 778-5530; [email protected]
1

Department of Oncology, Johns Hopkins University, Baltimore, Maryland; 2Department of Medicine, Atlanta Veterans Affairs Medical Center, Atlanta, Georgia;
Winship Cancer Institute, Emory University, Atlanta, Georgia; 4Department of Surgery, Emory University School of Medicine, Atlanta, Georgia; 5Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, Georgia; 6Department of Hematology and Medical Oncology, Emory University School of
Medicine, Atlanta, Georgia.; 7Department of Psychiatry, Johns Hopkins University, Baltimore, Maryland
3

DOI: 10.1002/cncr.28479, Received: July 25, 2013; Revised: September 3, 2013; Accepted: September 16, 2013, Published online March 24, 2014 in Wiley
Online Library (wileyonlinelibrary.com)

1394

Cancer

May 1, 2014

Reduced HNC Risk After VPA Use/Kang et al

MATERIALS AND METHODS

Data Sources

The National Veterans Affairs (VA) Medical SAS data sets

were searched in conjunction with the VA Decision Support System data from the VA Corporate Data Warehouse.
The project was approved by the Institutional Review
Board at Emory University and by the Research and Development Committee at the Atlanta VA Medical Center.
Data were extracted by the VA Informatics and Computing
Infrastructure. The data elements obtained on each study
subject included scrambled social security number, sex, age,
first date of encounter, last date of encounter, first VPA prescription filled, last VPA prescription filled, serum drug levels for VPA when available, International Classification of
Diseases29th edition codes of associated psychiatric (bipolar disorder, posttraumatic stress disorder [PTSD], depression, anxiety, schizophrenia, and substance and alcohol
abuse) or neurologic (migraines and seizures) diagnoses,
and smoking-related comorbidities such as coronary artery
disease and chronic obstructive pulmonary disease
(COPD). The smoking status of the study subjects was
determined from health flags, which are recorded by clinical providers at the end of a clinical visit and serve as a quality measure for medical care delivered in the VA system.
Smoking-related health flags characterize patients as
never-smoker, nonsmoker, nonsmoker for more than
X number of years, past smoker, and current smoker
and also include information regarding smoking cessation
counseling. Cancer cases were ascertained by linking the
data from the VA Corporate Data Warehouse with the VA
Central Cancer Registry (VACCR) in Washington, DC
using scrambled social security numbers as unique identifiers. The VACCR has been reported to capture at least
90% of patients with cancer who are treated in the VA
system.26
Study Population

The inclusion criteria for the main cohort were as follows: 1) the presence of at least one diagnosis of psychiatric or neurologic diseases for which long-term VPA has
an accepted clinical indication (bipolar disorder, PTSD,
migraines, or seizures); 2) clinical follow-up for a duration of at least 1 year; 3) current smoker or former
smoker status; and 4) aged at least 40 years at the inclusion of the cohort. We excluded patients without evidence of a smoking history because the preponderance of
the preclinical evidence points toward a particular role
for HDAC-mediated and DNMT1-mediated epigenetic
changes in the etiology of smoking-related cancers. Subjects who received a cancer diagnosis within 1 year after
Cancer

May 1, 2014

their first visit to the VA were excluded to account for

possible asymptomatic prevalent cases. Furthermore,
because all 5 types of cancer studied in the current analysis are very rare in young patients, we excluded patients
who were aged < 40 years. This enrichment of patients
at risk for smoking-related cancers based on age and
smoking status is supported by numerous studies evaluating interventions for the risk reduction of such cancers.27-29 Given that there was concern that the VACCR
may have underreported cancer cases in the early years
since its inception in 1999, we defined the beginning of
the observation period as the later date of either January
1, 2002 or the first visit to the VA for 1 of the 4 inclusion diagnoses. At the time of analysis, VACCR data
were available until December 31, 2008, which was
defined as the end of the study period. Because shortterm drug exposure is unlikely to influence cancer risk,
we excluded patients with < 1 year of VPA use.30 The
start of the observation period was defined as the first
visit for 1 of the 4 inclusion diagnoses for non-VPA users
and the date of the first filled prescription for VPA users.
The end of the observation period was either the date of
a cancer diagnosis, the last visit date for 1 of the inclusion
diagnoses, or the end of the study period.
Statistical Analysis

All statistical analyses were performed using SAS statistical software (version 9.2; SAS Institute Inc, Cary, NC).
All the tests were 2-sided, with statistical significance
established at P < .05. The characteristics of each cohort
were compared using the chi-square test and Student t
test. Cancer incidence over the follow-up period was calculated as a rate of new occurrences of cancer over the
total number of person-years and further explored using
the Kaplan-Meier method. Univariate analyses of cancer
incidence and cancer deaths were performed using the
log-rank test. Multivariate adjusted hazards ratios (HRs)
for cancer incidence were determined using the Cox proportional hazards model. Covariates considered in the
multivariate analyses were age, sex, race, smoking status,
psychiatric disease (bipolar disorder, PTSD, schizophrenia, depression, or anxiety), neurologic disease (seizures
and migraines), COPD, and evidence of alcohol and
substance abuse. Formal tests were conducted to confirm
the assumption of proportionality. To assess the impact
of the duration of VPA exposure and VPA serum drug
levels, similar multivariate analyses were performed for
different intervals of VPA use and levels. For propensity
score analyses, propensity scores for VPA use were calculated from logistic regression analysis using age at study
1395

Original Article

entry, sex, race, smoking status, alcohol and substance

abuse, diagnosis of each individual psychiatric and/or
neurologic disorder (using International Classification of
Diseases29th edition codes), and COPD as independent
variables. Propensity scores were used in a multivariate
model as an independent variable and in subgroup analyses divided by quintiles of propensity score.31 Tests for
interactions between VPA use, alcohol use, and smoking
were conducted.
Propensity scores for VPA use were calculated from
the logistic regression model that used age at study entry,
sex, smoking status, substance abuse, diagnosis of each
individual psychiatric and/or neurologic disorder,
COPD, and coronary artery disease as independent variables. Subgroup analysis by propensity score quintile or
matching by propensity score are well established methods
with which to balance cofactors within groups, thus
reducing biases that could arise from vastly different distributions of these cofactors in a Cox proportional hazards
model.31 Propensity scores were used in a multivariate
model as an independent variable and in subclass analyses
stratified by propensity score quintiles.31
RESULTS
Cohort Characteristics

A total of 636,051 individuals aged > 40 years were initially identified. After excluding never-smokers, patients
with unknown smoking status, and those who had a cancer diagnosis within the first year after their first VA visit,
the final cohort consisted of 439,628 patients, 26,911 of
whom had filled prescriptions for VPA for > 1 year. The
mean follow-up duration was 4.40 years (standard deviation [SD], 2.29 years) for non-VPA users and 4.42 years
(SD, 2.05 years) for VPA users (P 5 .11). VPA users on
average were slightly younger than nonusers (median age,
59 years vs 60 years), and tended to have a higher incidence of bipolar disorder, schizophrenia, seizure disorders, migraines, and alcohol and substance abuse. The
prevalence of PTSD, depression, and anxiety was lower in
VPA users. No significant differences between VPA users
and nonusers were observed in terms of percentages of former (51%) and current (49%) smokers as well as the prevalence of COPD (18%) at baseline (Table 1). In addition,
despite the risk of weight gain with VPA, body mass indices were not found to be significantly different between
the 2 groups.
Cancer Incidence

Crude and adjusted HRs for lung, head and neck, prostate,
colorectal, and bladder cancer comparing VPA users with
1396

TABLE 1. General Characteristics

Entire Cohort

Characteristics
Age, y

Sex
Smoking

Race

Mean
SD
Median
Male
Female
Past
Current
Caucasian
African
American
Hispanic
Asian
Hawaiian
Native
American
Unknown

Bipolar
PTSD
Seizures
Migraine
Anxiety
Depression
Schizophrenia
COPD
Alcohol and substance abuse
Mean BMI
Mean follow-up, y
Mean propensity score

VPA Use

Non-VPA Use

(n526,911),
%

(n5412,717),
%

59.4
9.2
59
24,969 (92.8)
1944 (7.2)
13,660 (50.8)
13,251 (49.2)
19,753 (73.4)
4180 (15.6)

61.4
9.8
60
383,103 (92.8)
29,685 (7.2)
208,964 (50.6)
203,753 (49.4)
294,391 (71.3)
68,310 (16.5)

108 (0.40)
62 (0.23)
263 (0.98)
175 (0.65)
2370 (8.81)
21,577 (80.2)
13,261 (49.3)
6925 (25.7)
3469(12.9)
5587 (20.7)
6151 (22.7)
3377 (13.0)
4984 (18.5)
6363 (26.6)
29.68
4.42
0.083

2024
1116
3835
3390

<.001
.84
.68
<.001

(0.49)
(0.27)
(0.93)
(0.82)

39,651 (9.6)
249,568 (46.5)
251,698 (61)
68,682 (16.7)
46,661 (11.3)
87,706 (21.3)
108,732 (26.4)
16,128 (3.9)
75,338 (18.3)
75,749 (18.4)
29.5
4.40
0.055

<.001
<.001
<.001
<.001
.057
<.001
<.001
.27
<.001
.41
.11
<.001

Abbreviations: BMI, body mass index; COPD, chronic obstructive pulmonary disease; PTSD, posttraumatic stress disorder; SD, standard deviation;
VPA, valproic acid.

nonusers are shown in Table 2. In the multivariate analysis,

VPA use was associated with significant reductions in the
risk of head and neck cancers (HR, 0.66; 95% confidence
interval [95% CI], 0.48-0.92). No association between
VPA use and risk reduction was observed for lung, colorectal, prostate, or bladder cancers. No interaction was
found between VPA use, smoking status, and alcohol use.
Relationship Between Duration of VPA Use and
VPA Blood Levels and Risk of Head and Neck
Cancer

The relationship between the duration of VPA use and

the risk of head and neck cancer is shown in Figure 1.
Compared with VPA nonusers, those who used VPA for 1
to 3 years were found to have no significant reduction in
their risk of developing head and neck cancer (HR, 0.96;
95% CI, 0.58-1.60), whereas subjects with a duration of
exposure of  3 years experienced a significant risk reduction (HR, 0.57; 95% CI, 0.39-0.85) (Fig. 1). Next, we
Cancer

May 1, 2014

Reduced HNC Risk After VPA Use/Kang et al

TABLE 2. Cancer-Specific Hazards Ratios

Event Counts
Cancer Site-Specific Analyses
Lung
VPA nonusersc
VPA usersd
Head and neck
VPA nonusersc
VPA usersc
Prostate
VPA nonuserse
VPA usersf
Colon and rectum
VPA nonusersc
VPA usersc
Bladder
VPA nonusersc
VPA usersc

Incidence HRs (95% CIs)

Cases

Crude

Model 1a

Model 2b

2151
155

1 (ref)
0.96 (0.81-1.14)

1 (ref)
1.00 (0.84-1.19)

1 (ref)
1.00 (0.84-1.20)

916
48

1 (ref)
0.68 (0.50-0.93)

1 (ref)
0.66 (0.48-0.92)

1 (ref)
0.67 (0.48-0.92)

4334
317

1 (ref)
0.97 (0.86-1.10)

1 (ref)
0.96(0.88-1.12)

1 (ref)
0.96 (0.85-1.09)

1168
83

1 (ref)
0.90 (0.71-1.15)

1 (ref)
0.95 (0.74-1.22)

1 (ref)
0.95 (0.74-1.21)

1388
91

1 (ref)
0.93 (0.71-1.21)

1 (ref)
0.86 (0.64-1.15)

1 (ref)
0.85 (0.63-1.14)

Abbreviations: 95% CI, 95% confidence interval; HR, hazards ratio; ref, reference; VPA, valproic acid.
a
Cox proportional hazards model adjusted for age, sex, race, smoking status, psychiatric disease (bipolar disorder, posttraumatic stress disorder, schizophrenia, depression, and anxiety), neurologic disease (seizures and migraines), evidence of alcohol and substance abuse, and chronic obstructive pulmonary
disease.
b
Cox proportional hazards model adjusted for propensity score.
c
Total of 412,717 subjects (non-VPA use).
d
Total of 26,911 subjects (VPA use).
e
Total of 383,103 subjects (non-VPA use).
f
Total of 24,969 subjects (VPA use).
Statistically significant results are shown in bold

analyzed the association between median VPA drug levels

and the reduction in head and neck cancer risk by dose
using the previously defined cutoff of 40 ug/mL for effective HDAC inhibition.17 A statistically significant risk
reduction for head and neck cancer was observed only in
the group of patients who had median VPA levels in the
therapeutic range for HDAC inhibition (HR, 0.59; 95%
CI, 0.35-0.99) (Fig. 1). Both time and concentration dependence of the VPA effect on head and neck cancer risk
reduction appear to support a causal relationship.
Impact of VPA Use on Clinical Cancer
Characteristics

Squamous cell carcinomas (SCCs) of the head and neck

have 2 very different etiologies. In addition to classic risk
factors such as tobacco and alcohol, infections with certain
serotypes of human papillomaviruses (HPVs), most notably HPV type 16, have emerged as a cause of the rapidly
rising incidence of oropharyngeal carcinomas.32-34 A distinction between oropharyngeal and nonoropharyngeal
cancers is important because HDAC inhibitors have been
reported to be capable of inducing apoptosis in HPVinfected cells in vitro, suggesting that a preferential effect
against HPV-positive cancers may exist.35
The results of the current analysis revealed a nearly
equal reduction in the risk of both oropharyngeal (HR,
Cancer

May 1, 2014

0.67; 95% CI, 0.32-1.37) and nonoropharyngeal (HR,

0.67; 95% CI, 0.47-0.95) cancers by VPA (Fig. 1).
Because it is possible that the exclusion of nonsmokers
from the cohort disproportionally eliminated patients
with HPV-related head and neck cancers, we also analyzed
the risks for oropharyngeal (HR, 1.02; 95% CI, 0.631.66) and nonoropharyngeal (HR, 0.75; 95% CI, 0.570.98) cancers in the entire cohort, including among
never-smokers. These findings argue against a preferential
antiviral mechanism of action for VPA and suggest that
VPA may be particularly effective against smokinginduced SCCs.
DISCUSSION
In this retrospective cohort study of US veterans, VPA use
was found to be associated with a significantly decreased
incidence of head and neck SCC. The observed relationship between long-term exposure to an HDAC inhibitor
(in this case VPA) and reduced cancer risk in this VA
population-based study complements preclinical data on
the role of early epigenetic events in carcinogenesis1 and
to the best of our knowledge confirms for the first time
clinically that inhibitors of epigenetic repressors may serve
as promising cancer prevention agents. The current study
data demonstrated that risk reduction for head and neck
cancers was most pronounced after 3 years of VPA use.
1397

Original Article

Figure 1. Forest plot is shown demonstrating hazards ratios (HRs) and 95% confidence intervals (95% CIs) for the associations
between valproic acid (Valp) use and clinical scenarios. All analyses were conducted as Cox proportional hazards models and
controlled for age, sex, race, smoking status, psychiatric disease (bipolar disorder, posttraumatic stress disorder, schizophrenia,
depression, and anxiety), neurologic disease (seizures and migraines), evidence of alcohol and substance abuse, and chronic obstructive pulmonary disease. V/C indicates Valproate users/controls; HNC, head and neck cancer.

The optimal duration of exposure could not be determined in the current study because the number of events
in patients with longer exposures was limited. A longer
follow-up of the current study cohort or a larger validation
cohort will be necessary to address this question.
Although differences in the baseline clinical characteristics of VPA users versus nonusers in this cohort were
adjusted for by multivariate and propensity score analyses,
potential sources of bias remain. The most important variable in determining the cancer risk of the aerodigestive
system is the cumulative lifetime smoking history. The
health flags collected in the VA databases provide detailed
information regarding the individuals current smoking
status, but do not provide the cumulative amount of cigarettes smoked. Because the psychiatric comorbidities on
which our cohort selection was based are strongly associated with increased tobacco abuse and tobacco-related
morbidity and mortality,36,37 and because these psychiatric comorbidities are not entirely evenly distributed
between VPA users and nonusers, it is possible that the
lifetime exposure of cigarettes could have been imbalanced between the groups. However, because psychiatric
comorbidities were more common in the patients receiving VPA, this is likely to be weighted heavier in the VPA
users and is thus unlikely to explain the observed results of
a decreased incidence of head and neck cancer. Given that
the risk for COPD, another closely linked smoking1398

related disease, was identical between VPA users and nonusers (Table 1), the cumulative smoking histories were
most likely comparable.
Noncompliance with a medical regimen could have
been a source of bias. Compliance is always a concern,
particularly in patients with mental illness. The data from
the current study demonstrated that the reduction in head
and neck cancer risk in patients with a subtherapeutic median VPA level was less evident. Thus it is possible that
the inclusion of patients with poor medication compliance in the group exposed to VPA may have made the
association less prominent.
Finally, evidence is emerging that the risk of
smoking-related cancers may be dependent on certain genotypes of nicotine- and carcinogen-metabolizing
enzymes such as cytochrome P450 2A6 and others.38,39
The nature of the current study does not grant us detailed
knowledge of these genotypes. However, given the finding
that the risk of other smoking-related malignancies such
as lung and bladder cancer is unaffected by VPA exposure,
it is unlikely that significant imbalances in the genotypes
of these metabolizing enzymes are responsible for the
observed risk reduction in head and neck cancer.
A mechanistic explanation for why SCCs of the head
and neck are more susceptible to prevention by VPA is not
straightforward, but recent whole-genome sequencing, genotyping, methylation, and gene expression projects have
Cancer

May 1, 2014

Reduced HNC Risk After VPA Use/Kang et al

provided a wealth of information implicating epigenetic

events, particularly in patients with aerodigestive SCCs.
Whole-genome sequencing in patients with SCCs of the
head and neck and lung identified frequent mutations and
amplifications of the Histone-lysine N-methyltransferases
PRDM9 and EZH2 in both malignancies in up to 20% of
the cases.40,41 Recent whole-genome approaches have
revealed defects in 4 driver pathways in patients with head
and neck cancer: mitogenic signaling, cell cycle control,
p53 signaling, and NOTCH signaling.42 All these pathways are potentially affected by epigenetic changes: p16 is
not expressed in the vast majority of nonHPV-related
head and neck cancers. In > 50% of the cases, p16 is
silenced epigenetically by promoter methylation.43
Although p53 is mutated in > 80% of head and neck cancers, even those tumors without mutation frequently demonstrate loss of expression. One potential mechanism for
this is epigenetic silencing of p14, which shares a bidirectional promoter with p16 and controls the activity of the
ubiquitin-protein ligase Mouse double minute 2 homolog
(MDM2), which targets p53 for proteasomal degradation.44 Notch signaling in patients with head and neck cancer has a predominantly tumor-suppressive effect. It is
possible that the upregulation of NOTCH1 after treatment
with HDAC inhibitors can be an additional mechanism of
tumor suppression.45,46 Finally, a recent study analyzing
the DNA methylation pattern of head and neck cancers
identified a subset of tumors with a hypermethylator phenotype, similar to the previously described CpG island
methylator phenotype (CIMP) observed among patients
with colon cancer.47 The question of whether this subset of
patients with head and neck cancer is particularly sensitive
to the effects of epigenetic therapies will need to be
explored.42 Although the precise underlying molecular
events for these observations need to be unraveled, the data
from the current study have provided epidemiologic support for the susceptibility of head and neck cancers to the
effects of HDAC inhibitors.
Although the anticancer effects of HDAC inhibitors
against HPV-related malignancies have been described in
vitro,35 the current study data have demonstrated that
VPA use does not preferentially decrease the risk of cancers of the oropharynx, which account for the majority of
HPV-related cases,32-34 thereby making an antiviral effect
of VPA unlikely as the primary contributor to the
observed decrease in head and neck cancer incidence, at
least in patients with smoking history.
The long-term use of VPA is associated with a
decreased risk of head and neck cancers in high-risk veterans. The extensive preclinical and clinical evidence and
Cancer

May 1, 2014

the magnitude of the observed potential benefit warrant

further investigation of VPA as a cancer chemoprevention
agent, possibly in patients with premalignant lesions of
the head and neck.
FUNDING SUPPORT
This study is based on work supported in part by the Department
of Veterans Affairs, the Veterans Health Administration, and Office
of Research and Development (Biomedical Laboratory Research
and Development) grant 7IK2BX001283-02 to Dr. Brandes.
Other grant funding includes a National Cancer Institute (NCI) 5
P50 CA128613-02 Career Development Project award, an NCI
pilot grant P30CA138292, a CHEST Foundation/LUNGevity
Foundation Clinical Lung Cancer Research award, a Uniting
Against Lung Cancer/LUNGevity Foundation research award, and
a Sun Trust Scholar Award, all to Dr. Brandes. The contents of this
publication do not reflect the views of the Department of Veterans
Affairs or the United States Government.

CONFLICT OF INTEREST DISCLOSURES

Dr. Ramalingam received personal fees from Aveo, Ariad, Boehringer Ingelheim, Genentech, Lilly, Teva, Novartis, and
AstraZeneca.

REFERENCES
1. Herman JG, Baylin SB. Gene silencing in cancer in association with
promoter hypermethylation. N Engl J Med. 2003;349:2042-2054.
2. McCabe MT, Brandes JC, Vertino PM. Cancer DNA methylation:
molecular mechanisms and clinical implications. Clin Cancer Res.
2009;15:3927-3937.
3. Belinsky SA, Liechty KC, Gentry FD, et al. Promoter hypermethylation of multiple genes in sputum precedes lung cancer incidence in
a high-risk cohort. Cancer Res. 2006;66:3338-3344.
4. Belinsky SA, Palmisano WA, Gilliland FD, et al. Aberrant promoter
methylation in bronchial epithelium and sputum from current and
former smokers. Cancer Res. 2002;62:2370-2377.
5. Palmisano WA, Divine KK, Saccomanno G, et al. Predicting lung
cancer by detecting aberrant promoter methylation in sputum. Cancer Res. 2000;60:5954-5958.
6. Alumkal JJ, Zhang Z, Humphreys EB, et al. Effect of DNA methylation on identification of aggressive prostate cancer. Urology. 2008;
72:1234-1239.
7. Nelson WG, Yegnasubramanian S, Agoston AT, et al. Abnormal
DNA methylation, epigenetics, and prostate cancer. Front Biosci.
2007;12:4254-4266.
8. Brandes JC, van Engeland M, Wouters KA, Weijenberg MP,
Herman JG. CHFR promoter hypermethylation in colon cancer correlates with the microsatellite instability phenotype. Carcinogenesis.
2005;26:1152-1156.
9. Schuebel KE, Chen W, Cope L, et al. Comparing the DNA hypermethylome with gene mutations in human colorectal cancer. PLoS
Genet. 2007;3:1709-1723.
10. Hoffman AM, Cairns P. Epigenetics of kidney cancer and bladder
cancer. Epigenomics. 2011;3:19-34.
11. Kim YK, Kim WJ. Epigenetic markers as promising prognosticators
for bladder cancer. Int J Urol. 2009;16:17-22.
12. Wong TS, Gao W, Li ZH, Chan JY, Ho WK. Epigenetic dysregulation in laryngeal squamous cell carcinoma. J Oncol. 2012;2012:
739461.
13. Ha PK, Califano JA. Promoter methylation and inactivation of
tumour-suppressor genes in oral squamous-cell carcinoma. Lancet
Oncol. 2006;7:77-82.

1399

Original Article
14. Hoque MO, Kim MS, Ostrow KL, et al. Genome-wide promoter
analysis uncovers portions of the cancer methylome. Cancer Res.
2008;68:2661-2670.
15. Belinsky SA, Klinge DM, Stidley CA, et al. Inhibition of DNA
methylation and histone deacetylation prevents murine lung cancer.
Cancer Res. 2003;63:7089-7093.
16. McCabe MT, Low JA, Daignault S, Imperiale MJ, Wojno KJ, Day
ML. Inhibition of DNA methyltransferase activity prevents tumorigenesis in a mouse model of prostate cancer. Cancer Res. 2006;66:
385-392.
17. Brodie SA, Li G, Al-Kommos A, et al. Class I HDACs Are Mediators of Smoke-Carcinogen Induced Stabilization of DNMT1 and
Serve as Promising Targets for Chemoprevention of Lung Cancer.
Presented at American Association for Cancer Research Special Conference: Chromatin and Epigenetics in Cancer; June 19-22, 2013;
Atlanta, GA.
18. Gottlicher M, Minucci S, Zhu P, et al. Valproic acid defines a novel
class of HDAC inhibitors inducing differentiation of transformed
cells. EMBO J. 2001;20:6969-6978.
19. Lubbert M, Suciu S, Baila L, et al. Low-dose decitabine versus best
supportive care in elderly patients with intermediate- or high-risk
myelodysplastic syndrome (MDS) ineligible for intensive chemotherapy: final results of the randomized phase III study of the European
Organisation for Research and Treatment of Cancer Leukemia
Group and the German MDS Study Group. J Clin Oncol. 2011;29:
1987-1996.
20. Fenaux P, Mufti GJ, Hellstrom-Lindberg E, et al. Efficacy of azacitidine compared with that of conventional care regimens in the treatment of higher-risk myelodysplastic syndromes: a randomised, openlabel, phase III study. Lancet Oncol. 2009;10:223-232.
21. Kantarjian H, Issa JP, Rosenfeld CS, et al. Decitabine improves
patient outcomes in myelodysplastic syndromes: results of a phase
III randomized study. Cancer. 2006;106:1794-1803.
22. Olsen EA, Kim YH, Kuzel TM, et al. Phase IIb multicenter trial of
vorinostat in patients with persistent, progressive, or treatment refractory cutaneous T-cell lymphoma. J Clin Oncol. 2007;25:3109-3115.
23. Juergens RA, Wrangle J, Vendetti FP, et al. Combination epigenetic
therapy has efficacy in patients with refractory advanced non-small
cell lung cancer. Cancer Discov. 2011;1:598-607.
24. Sharma S, Kelly TK, Jones PA. Epigenetics in cancer. Carcinogenesis.
2010;31:27-36.
25. Duenas-Gonzalez A, Candelaria M, Perez-Plascencia C, PerezCardenas E, de la Cruz-Hernandez E, Herrera LA. Valproic acid as
epigenetic cancer drug: preclinical, clinical and transcriptional effects
on solid tumors. Cancer Treat Rev. 2008;34:206-222.0.
26. Zullig LL, Jackson GL, Dorn RA, et al. Cancer incidence among
patients of the U.S. Veterans Affairs Health Care System. Mil Med.
2012;177:693-701.
27. National Lung Screening Trial Research Team, Aberle DR, Adams
AM, et al. Reduced lung-cancer mortality with low-dose computed
tomographic screening. N Engl J Med. 2011;365:395-409.
28. International Early Lung Cancer Action Program Investigators,
Henschke CI, Yankelevitz DF, et al. Survival of patients with stage I
lung cancer detected on CT screening. N Engl J Med. 2006;355:
1763-1771.
29. Hittelman WN, Liu DD, Kurie JM, et al. Proliferative changes in
the bronchial epithelium of former smokers treated with retinoids. J
Natl Cancer Inst. 2007;99:1603-1612.

1400

30. Farwell WR, Scranton RE, Lawler EV, et al. The association
between statins and cancer incidence in a veterans population. J Natl
Cancer Inst. 2008;100:134-139.
31. Rubin DB. Estimating causal effects from large data sets using propensity scores. Ann Intern Med. 1997;127(8 pt 2):757-763.
32. Ang KK, Harris J, Wheeler R, et al. Human papillomavirus and survival of patients with oropharyngeal cancer. N Engl J Med. 2010;
363:24-35.
33. Gillison ML, DSouza G, Westra W, et al. Distinct risk factor profiles for human papillomavirus type 16-positive and human papillomavirus type 16-negative head and neck cancers. J Natl Cancer Inst.
2008;100:407-420.
34. Gillison ML, Koch WM, Capone RB, et al. Evidence for a causal
association between human papillomavirus and a subset of head and
neck cancers. J Natl Cancer Inst. 2000;92:709-720.
35. Finzer P, Ventz R, Kuntzen C, Seibert N, Soto U, Rosl F. Growth
arrest of HPV-positive cells after histone deacetylase inhibition is independent of E6/E7 oncogene expression. Virology. 2002;304:265273.
36. Hurt RD, Offord KP, Croghan IT, et al. Mortality following inpatient addictions treatment. Role of tobacco use in a communitybased cohort. JAMA. 1996;275:1097-1103.
37. Lasser K, Boyd JW, Woolhandler S, Himmelstein DU, McCormick
D, Bor DH. Smoking and mental illness: a population-based prevalence study. JAMA. 2000;284:2606-2610.
38. Wassenaar CA, Dong Q, Wei Q, Amos CI, Spitz MR, Tyndale RF.
Relationship between CYP2A6 and CHRNA5-CHRNA3-CHRNB4
variation and smoking behaviors and lung cancer risk. J Natl Cancer
Inst. 2011;103:1342-1346.
39. Mwenifumbo JC, Tyndale RF. Genetic variability in CYP2A6 and the
pharmacokinetics of nicotine. Pharmacogenomics. 2007;8:1385-1402.
40. Stransky N, Egloff AM, Tward AD, et al. The mutational landscape
of head and neck squamous cell carcinoma. Science. 2011;333:11571160.
41. Cancer Genome Atlas Research Network. Comprehensive genomic
characterization of squamous cell lung cancers. Nature. 2012;489:
519-525. .http://www.ncbi.nlm.nih.gov/pubmed?term5Cancer%20
Genome%20Atlas%20Research%20Network%5BCorporate%20
Author%5D.
42. Pickering CR, Zhang J, Yoo SY, et al. Integrative genomic characterization of oral squamous cell carcinoma identifies frequent somatic
drivers. Cancer Discov. 2013;3:770-781.
43. Ohta S, Uemura H, Matsui Y, et al. Alterations of p16 and p14ARF
genes and their 9p21 locus in oral squamous cell carcinoma. Oral
Surg Oral Med Oral Pathol Oral Radiol Endod. 2009;107:81-91.
44. Calmon MF, Colombo J, Carvalho F, et al. Methylation profile of
genes CDKN2A (p14 and p16), DAPK1, CDH1, and ADAM23 in
head and neck cancer. Cancer Genet Cytogenet. 2007;173:31-37.
45. Adler JT, Hottinger DG, Kunnimalaiyaan M, Chen H. Histone
deacetylase inhibitors upregulate Notch-1 and inhibit growth in pheochromocytoma cells. Surgery. 2008;144:956-961; discussion 961962.
46. Platta CS, Greenblatt DY, Kunnimalaiyaan M, Chen H. Valproic
acid induces Notch1 signaling in small cell lung cancer cells. J Surg
Res. 2008;148:31-37.
47. Toyota M, Ahuja N, Ohe-Toyota M, et al; CpG island methylator
phenotype in colon cancer. PNAS 1999;96:86816; PMID:
10411935.

Cancer

May 1, 2014