13.
14.
'15.
16.
81, 109 (1968). Mean daytime temperature of the
plot surface sand was 25.4C (SD, 2.7; n=' 9). The
snail can tolerate this, and if either party is at risk, it
is probably the parasite.
J. J. Gambino,J. Parnsiol. 45, 440, 456 (1959).
W. B. Vemberg, F. J. Vernberg, F. W. Beccerdite,
Scence 164, 1287 (1969).
J. S. McDaniel and J. R. Coggins,J. ElisbiaMitchcU
Sci. Soc. 88, 55 (1972).
P. J. DeCoursey and W. B. Vemberg, in Symbiosi in
F-Actin and Microtubule Suspensions as
Indeterminate Fluids
ROBERT E. BuXBAiuM, TimOTHY DENNERLL, SERGE WEISS,
STEVEN R. HEIDEMANN
The viscosity of F-actin and microtubule suspensions has been measured as a func tion
of shear rate with a Weissenberg rhoogoniometer. At shear rates of less than 1.0 per
second the viscosity of suspensions of these two structural proteins is inversely
proportional to shear rate. These results are consistent with previous in vivo measi urments of the viscosity of cytoplasm. This power law implies that shear stres,;s is
independent of shear rate; that is, shear stress is a constant at all shear rates less t han
1.0 per second. Thus the flow profile of these fluids is indeterminate, or nearly so. 1[his
flow property may explain several aspects of intracellular motility in living aells.
Possibl explanations for this flow propet are based on a recent model for semidi]lute
suspensions of rigid rods or a cassical friction model for liquid crystals.
N
CTIN
AND
MICROTUBULES ARE
among the most widely conserved
tructural proteins within eukaryotic
cells. It has long been suspected that the
viscoelastic properties of these polymers
(particularly F-actin) play an important role
in the maintenance and development of cell
shape and in cellular motility (1). Maruyama
et al. (2) found that the measured viscosity
of F-actin was precisely inversely proportional to the shear rate. These workers reported on the uniqueness of this inverse
proportionality and speculated that it may
be the result of the formation of an actin
network. Subsequent rheological studies
confirmed that F-actin suspensions are shear
tinning but did not find the same shearviscosity dependence or did not discuss this
relationship (3, 4). We confirm the observation of Maruyama et al. for actin and observe a similar inverse proportionality for
suspensions of microtubules. Also, we show
that as a result of this dependence, the fluid
flow profiles for such suspensions are indeterminate. That is, a given force does not fix
the velocity of movement in these fluids.
Figure 1 is a logarithmic plot of viscosity
versus shear rate for two runs of actin at
different concentrations, two runs of microtubules with and without taxol [a stimulator
of microtubule assembly (5)], and one run
of the viscosity standard. The values reported in Fig. 1 and throughout this report are
the stable values obtained after shearing the
fluids for several seconds. As found previ20 MARCH
I987
ously for actin (2) in both actin and mi crotubule suspensions, the torque rises shairply
as shear begins but then declines to a st;able
value over a time period that depends on the
shear rate. In addition to the shear-thinriing
behavior characteristic of all polymer suspensions, these plots show that the power
law dependency for actin and microtubWdes
is nearly -1 for all concentrations. ThaLtis,
actin and microtubule suspensions behavre as
power law fluids with
1
an = Aln
(1)
where 9 is viscosity, A is a constant, ; is
shear rate, and n is the power law expon,lent.
In 12 runs of actin at concentrations fro]m 2
to 6 mg/ml the exponent varied firom
-0.85 ± 0.02 (+ standard error of reg,ression coefficient) to -1.15 ± 0.01 witth a
mean of -1.00. Both extreme values occurred for actin at 2 mg/ml with the r*xeogoniometer at its lower limit of resolutc ion.
In seven microtubule runs the exporlent
varied from -0.90 ± 0.01 to -1.03 ± C).03
with a mean of -0.94. The -1 slope (on
log-log plots) was found to be nearly iridependent of the shearing history of the s,ample, as-shown in Fig. 2. The slope of the line
for increasing shear (-1.00 ± 0.02) is n early identical to that for decreasing si hear
(-1.01 ± 0.02). In a run of chrom;atographed actin (3 mg/ml) in which shear was
varied at random the power law depende.nce
was -0.99 ± 0.09. The power law deE?endence of the microtubule suspension visc-osi-
the Sea, W. B. Vernberg Ed. (Univ. of South
Carolina Press, Columbia, 1974), pp. 93-109.
17. My thanks to M. R. Carriker and[L.E.Hurdfor
valuable comments on the manuscript and to A. M.
Barse for field assistance. Partial fund was provided by a Biomedical Research Support Grant fromn
the University of Delaware.
4 September 1986; accepted 28 Januarv 1987
ty was similarly insensitive to shear history.
Our measuremcnts varied only slightly. The
small standard errors of regression coefficients indicate little variation of points
around the calculated line. The slope from
run to run also varied little at nominally the
same conditions. In five runs of actin at 6
mg/ml from three different actin preparations the mean slope was 1.01 ± 0.04
(SEM). The possibility that our results are
due to slipping at rheometer surfaces is
eliminated by the finding that actin and
microtubule suspensions pour easily and are
well mixed after the shearing process in the
rheometer. The observed viscosities for suspensions of these two filamentous constituents of the cytoplasm are consistent with
previous in vivo measurements of cytoplasmic viscosity. Figure 3 shows a comparison
of data obtained from various cytoplasmic
studies with that of F-actin suspension at 3
mg/ml. This similarity of the viscosity function in vitro and in vivo is particularly
interesting in view of the lack of true crosslinks within purified F-actin (6) and the
highly cross-linked structure of cytoplasm
(7).
Power law observations in this range are
significant because they contradict Graessley's classic random-coil-entanglement explanation that suggests the minimum n value is -9/11 (8). Typically, data show n
between -0.4 and -0.85 for polymer solutions (9). Significantly, since shear stress is
viscosity multiplied by shear rate
(Amn)j =Al(n+'1)
(2)
unit
where is the shear stress (force per
area). Our observation that n = -1 means
that the shear stress is independent of shear
rate. In this case, fluid motion is completely
indeterminate. In Fig. 4 we plot shear stress
data for actin, microtubules, and the Newtonian fluid standard. One's intuition, for
example, on the basis of flooded rivers, is
that increased shear increases shear stress. As
shown in Fig. 4, the Newtonian standard
T =
'O
=
r
R. E. Buxbaum, Department of Chemical Engineering,
Michigan State University, East Lansing, MI 48824.
T. Denncril, S. Weiss, S. R. Hcidemann, Department of
Physiology, Michigan State University, East Lansing, MI
48824.
REPORTS I511
Downloaded from on March 30, 2016
10. E. J. Pearson and T. C. Cheng,J. Invert. Patlo. 46,
239 (1985).
11. Snails could have been present during the day but
buried. On three daytime tides after evicting snails I
scratched 4 to 5 cm into the entire plot. A few snails
were unearthed but never enough to approach
nighttime counts. Moreover, snails tend to unbury
wtien submerged by tides. Never was there a marked
unburying after daytime low tides.
12. C. W. Schaefer, P. W. Milch, N. L. Levin, Nautilus
follows the intuitive expectation. However,
for both actin and microtubules the shear
stress remains constant at all shear rates
tested. This constant is the valueA in Eqs. 1
and 2.
In these experiments we controlled the
shear rate and measured the force. In most
biological (and other) situations, however,
the interaction is reversed: a pump, a gravitational potential, or a cell supplies a particular shear stress, and the flow pattern accommodates it. However, as shown in Fig.
4, a force alone cannot fix the flow patterns
for actin and microtubule (that is, indeterminate) suspensions. For any geometry,
only one force pattem gives reasonable flow
rates; push with less force and there is no
motion, push with more force and the fluid
velocity is limited by inerta alone.
Actin and microtubules are widely regarded as important in determining the physical
properties of cytoplasm (1). Energy-dependent movement of partides through the
Fig. 1. Viscosity as a function of shear rate at 23°C on
a log-log scale for suspensions of cytskeletal proteins
and a viscosity standard. Actin was purified from rabbit
skceletalmuscl by the meth-
od of Spudich and Watt, or
by their method and fiuther
purification by chromatography on Sephacryl S-200
(Phannacia, Piscataway, NJ)
(19). Punifled actin
was
4
maintained in dialysis at40C
against buffer A [2.0 mM
tris-HCI, pH 8.0, 0.2 mM
10,000
cytoplasm occurs in all eukaryotic cells, and brane-cortex structures or, in the case of
cytoplasm itself is capable of rapid, energy- algae, by cytoplasmic walls. The flowing
dependent movement in some cells (10, 11). cytoplasm and the containing cytoplasm are
Our data suggest that the velocity of move- fundamentally similar in their content of
ment is not limited by force, and the low water and proteins. Flow indeterminacy
Reynolds number characteristic of living may explain how these two regions of simisystems (12) suggests that inertia is not lar chemistry have such different velocities
responsible. By deduction then, the ob- while bearing exactly the same stresses. Posserved velocities are fixed by the chemical sibly, the cell pushes the cytoplasm at conkinetics of the biological motors. For exam- stant force in some part of the cell and drags
ple, structures within cells move suddenly on the cytoplasm in the rest of the cell
over moderate (-30 ,m) distances at con- (necessarily with the same force per unit
stant velocity, and they halt equally suddenly area). If the area pushing is smaller than the
(10). One explanation is that no motion area dragging, there will be no cytoplasmic
occurs until a threshold force is reached, flow. If it is larger, flow is rapid. Thus, for
then a constant velocity is maintained by the finite flows and equal shear on the cytostable kinetics of the mechanochemical mo- plasm and membrane, small differences in
tor.
The unusual fluid dynamics of nearly in- 10,000
determinate fluids may also explain the flow
properties that characterize cytoplasmic
streaming in various cells (11). In these cells
1,000
shearing flows are contained by cell mem-
+
0
-
10
+
S
1,000
10+
iL
1.
j
0.I 101
oC
100
o
M
ATP (adenosine triphos- >
k
phate), 0.5 mM mercaptoethanol, and 0.2mM CaC12]
for no more than 6 days.
10
Microtubule protein was
purified from bcef brain in
the presence of glycerol according to the method of
Shelanski et at. (20) with the
1I
modification that 0.1M
Pipes (piperazine ethanesul0.1
0.01
0.001
I
fonic acid), pH 6.6, was
Shear rate (sec-1)
used in all reassembly buffers. A model R.18 modified
(21) Weissenberg rheogoniometer was used for all rheometry experiments. Actin was polymerized by
adding KCI to a final concentration of 50 mM and MgSO4 to a final concentration of 2 mM to G actin
at various concentrations in buffer A; the mixtur was applied quickly to the bottom cone (2°, 5 cm in
diameter) of the rheogoniometer, and the actin was polymerized for 1 hour at 23°C before
measurements were made. Microtubule protein suspended in 0.lM Pipes,pH 6.9, 1 mMMgCl2, 1 mM
EGTA, 0.1 mM EDTA, and 0.5 mM GTP (guanosine tiphosphate) was polymerized at 37°C for 20
minutes and applied to the cone of the rheogoniometer. A humidified atmosphere was maintained
around the cone and plate assembly by adding a small pool of water to the floor of the instrument's
temperature control chamber. For each sample of protein loaded into the rheometer, 10 to 14 shear
rates (drive settings) were chosen to obtain torque readings. After each torque reading the drive was
turned off and the torque allowed to return to baseline before we reset the drive for the next reading.
Measurements on a single sample of protein took approximately 2 hours. The rheogoniometer was
calibrated with a Newtonian viscosity standard (R12000, Cannon Instiment Company). Measurements ofviscosity and shear were calculated from rheogoniometer drive settings and torque readouts by
standard formulas. (O) F-actin, 6 mg/ml; slope, -1.00 ± 0.02; (0) chromatographed F-actin, 2
mg/ml; slope, -0.98 ± 0.02; (A) polymerized microtubule protein, 12 mg/mil; slope, -1.00 ± 0.01;
(A) microtubule protein, 12 mg/ml, polymerized in the presence of 5 pM taxol; slope, -0.95 ± 0.03;
(0) viscosity standard, slope, 0.00 ± 0.01.
1512
100
06
.2
0.01
Shear rate
0.1
(.c-1)
Fig. 2. Two shear protocols for chromatographed
F-actin, 3 mg/ml, from low to high rates of shear
(0), slope, -1.00 ± 0.02, and from high to low
shear (0), slope, -1.01 ± 0.02.
10,000'
1-X.
1,0004
0.
0
a
Q
10
1004
a" 1"
1"1%
l0o
1%1V
1'
0.001
. . .. .~~~1
0.01
0.1
Shear rate
I
10
(sec-1)
Fig. 3. Viscosity of chromatographed F-actn, 3
mg/ml (0) compared with viscosity measurements of cytoplasm by various in vivo methods:
(0) Valberg and Albertini (22), (O) Nemoto
(23), (A) Sung et at. (24), (A) Hirmato (25),
(M) King and Macklem (26), (0) Sato et al. (27),
(V) Crick and Hughes (28), and (V) Yagi (29).
The linear regression for the in vivo data (----)
gives a slope of -1.02 0.18.
SCIENCE, VOL. 235
Fig. 4. Shear stress as a
function of shear rate for
chromatographed F-actin, 3 mg/ml (0); poly-
20
merized
tubulin,
6
mg/mi (A); and the
R12000 viscosity standard (O).
C~
10
0
0
0.001
a
0
0.01
0
Shear rate
chemistry can produce enormous differences
in flow.
This viscosity relation may also play a role
in slow axonal transport, which involves a
flow of cytoskeletal elements down the neural axon at a variety ofdifferent rates characteristic of the different cytoskeletal elements
(13). If the fluid flow is nearly indeternminate
and the axonal pressure drop is constant,
slight changes in the pushing pressure or
entrance region pressure drop will greatly
affect the transport rate down the axon.
Another possibility from shear-tinning
behavior that does not require flow indeterminacy concerns orgaiisms that locomote
upon a slime trail. In most instances this
slime is a polymer solution that would be
shear thinning; most crawling results from
sustained oscillations of contraction and extension. Two models are possible: (i) an
asymmetric oscillation in space so that the
moving area is always smaller than the stationary area or (ii) an asymmetric oscillation
in time both with the condition that the
drag on the front of the organism over the
substrate is deternined by Newtonian viscosity (in water, for example) and the drag
on the rear of the creature is determined by
shear-thinning slime. Then, as in Fig. 1, if
the cell extends faster than it contracts, a net
force will move the organism forward. Snail
slime possesses "solid-like" properties at low
shear rates (14) in concert with a shearthinning fluid model.
The rheology of actin suspensions has
generally been thought to be the result of
network destruction by shearing (2, 6, 15).
Although microtubule suspensions do not
form gels or the looping entanglements
required by network theories (4, 8), they
have the rheological properties of actin suspensions. Further, the limiting power law
exponent for entangled polymers is calculated to be -9/11 (8). Our data (Fig. 2) also
indicate that shearing history has a relatively
small effect on the viscosity of actin and
microtubule suspensions. These observa20 MARCH
1987
,1
~~~~~~1
(sec-1)
tions suggest that network destruction is not
primarily responsible for the rheology of
these filamentous proteins. We have formulated two alternative models for these viscosity observations.
One model follows a suggestion of Zaner
and Stossel (3) for actin suspensions and
assumes that semidilute suspensions of rigid
rods are at concentrations below the liquid
crystal formation (that is, an isotropic distribution of the rods in space before shearing).
In this model, as treated by Doi and Edwards (16) and by Jain and Cohen (17), a
large obstructional effect is caused by the
constraint that rods cannot pass through
each other. Assuming that the frequency of
rod-rod obstructions is due to shear-independent Brownian motion, Doi and Edwards (16) found regions where shear stress
is independent of shear rate. To the extent
that this model is appropriate, the phenomenon that is typically called "gelation" (true
solidification) in the biological literature is
seen as the "glass" (liquid with solid properties) transition induced by this obstructional
constraint. This glass transition explains
why the viscosity of cytoplasm and actin
suspensions is so similar, that is, why crosslinkers in cytoplasm have so little effect on
viscosity, as shown in Fig. 3. It also explains
why actin "gels" behave as liquids. This "log
jam model" can predict the observed -1
power law dependence of the viscosity and
also that the power can be smaller than -1
over small ranges of shear.
We propose a second model to explain the
observations with relatively flexible actin
filaments and to extend the applicable concentrations above those for liquid crystal
formation. This model differs from the network model and rigid rod model in that the
fluid is locally anisotropic. Fluid motion is
not continuous but occurs among discrete
domains in a classical analogy to solid sur-
face friction or superfluidity. Anderson (18)
has proposed this model to describe largescale density waves in smectic B liquid crys-
Fig. 5. Polarization micrographs of suspensions
of actin and microtubules (Leitz Ortholux I Pol
microscope, x1200). (A) F-actin at 25 mg/mi.
(Similar domains were observed at concentrations
of 8 mg/nl, but the birefringence was too dim to
photograph successfully.) (B) Microtubules at a
concentration of 6 mg/ml.
tals. If one domain slides over another, two
roughnesses encountering one another must
either be completely overwhelmed by the
forces driving them or must stop the motion
entirely. A roughness cannot provide a continuous source of linear dissipation because
any roughness that causes a purely elastic
deformation does not dissipate energy. Instead, it returns as much mechanical energy
to the lattice as was present in the original
deformation. Viscous stress is thus viewed
as the (shear rate independent) force necessary to substantially kink or break those
protein strands that extend from one solidlike domain to another. The effect that
biologists call gelation is, presumably, liquid
crystal domain formation. This solid friction
analogy is supported by the finding of ourselves and others (2) that the initial shear
stress (analogous to static friction of solids)
is always greater than the steady-state stress
(analogous to sliding friction of solids).
Additional evidence for this model is shown
in Fig. 5 in which actin and microtubule
protein suspensions reveal distinct domains
under polarized light in contradiction to the
assumptions of the rigid rod model described above.
REFERENCES AND NOTES
1. T. P. Stossel, J. Cel Bidl. 99, lSs (1984); K. R.
Porter, ibid., p. 3s; D. L. Taylor and J. S. Condeelis,
Int. Rev. Cytol. 56, 57 (1979).
2. K. M. Maruyama, M. Kaibara, E. Fukuda, Biohm.
Bio*py. Acta 371, 20 (1974).
3. K. S. Zaner and T. P. Stossel, J. Biol. Chem. 258,
11004 (1983).
4. M. A. Rockwell, M. Fechheimer, D. L. Taylor, CeU
Motil. 4, 197 (1984); M. Sato, G. Leirnbach, W. H.
Schwartz, T. D. Pollard, J. Biol. Chem. 260, 8585
(1985).
5. P. B. Schiff, J. Fant, S. B. Horwitz, Nature (London)
277,665 (1979).
6. K. S. Zaner and T. P. Stossel,J. CeU Bid. 93, 987
(1982).
REPORTS I513
7. J. J. Wolosewick and K. R. Porter, ibid. 82, 114
(1979); J. Heuser and M. W. Kirschner, ibid. 86,
212 (1980); M. Schliwa, K. B. Pryswansky, J. Van
Blerkom, Philos. Tram. R. Soc. London Sff. B 299,
199 (1982).
8. W. W. Graessley,J. Chem. Phys. 43, 2696 (1965);
ibid. 47, 1942 (1967).
9. R. B. Bird, R. C. Annstrong, 0. Hassenagen,
Dynmics of Polymeric Liquids (Wiley, New York,
1977), vol. 1.
10. L. I. Rebhun, Int. Rev. Cytol. 32, 92 (1972).
11. N. Kamiya, Annu. Rev. Plant Phsiol. 32, 205
(1981).
12. E. M. Purcell, Am. J. Phys. 45, 3 (1977).
13. M. Willard, W. M. Cowan, P. R. Vagelos, Proc.
Nati. Acad. Sci. U.SA. 71, 2183 (1974); P. N.
Hoffinan and R. J. Lasek, J. Cell Biol. 66, 351
(1975).
14. M. W. Denny and J. M. Gosline, J. Exp. Med. 88,
375 (1980).
15. S. MacLean-Fletcher and T. D. Pollard, J. CeU Biol.
85, 414 (1980).
16. M. Doi and S. F. Edwards, J. Chem. Soc. Faraday
Trans. 2 74, 560 (1978).
17. S. Jain and C. Cohen, Macrmolculs 14, 759
(1981).
18. P. W. Anderson, Basic Noiiom in Coensed Matter
PhAsi (Benjamin-Cummings, Menlo Park, CA,
1984), pp. 159-164.
19. J. A. Spudich and S. Watt,J. Biol. Chem. 246, 4866
(1971); S. MacLean-Fletcher and T. D. Pollard,
Biochem. Biop ys. Res. Commun. 96, 18 (1980).
20. M. L. Shelanski, F. Gaskin, C. R. Cantor, Proc. Nati.
Acad. Sci. U.SA. 70, 765 (1973).
21. J. Meissner, J. Appl. Pdym. Sci. 16, 2877 (1972).
22. P. A. Valberg and D. F. Albertini,J. Cdl Biol. 101,
130 (1985).
23. I. Nemoto, IEEE Trams. Biomed. Eng. 29, 745
(1982).
24. K. P. Sung ct al., Bioph. J. 39, 101 (1982).
Two Mammalian Genes Transcribed from Opposite
Strands of the Same DNA Locus
JOHN P. ADELMAN, CHRIS T. BOND, JAMES DOUGLASS,
EDWARD HERBERT
This report describes the characterization of a genomic locus in the rat that encodes
overlapping genes occupying both strands of the same piece of DNA. One gene
(strand) encodes gonadotropin-releasing hormone (GnRH). A second gene, SH, is
transcribed from the other DNA strand to produce RNA ofundefined function. The
RNAs transcribed from each DNA strand are spliced and polyadenylated, and share
significant exon domains. GnR.H is expressed in the central nervous system while SH
transcripts are present in the heart. IThus, the genome of a mammalian organism
encodes two distinct genes by using both strands of the same DNA.
I NHERENT TO THE CONCEPT OF A EU-
within the first Gart intron and transcribed
DNA strand opposite the transcribed
strand is to serve as a necessary conduit for
double-stranded, semiconservaiive DNA
replication. Likewise, although the discovery of introns brought about modifications
in the concept of genes as linear discrete
units along the chromosome, introns have
been regarded as raw genetic material susceptible to high levels of evolutionary drift
with regard to nucleotide sequence and even
to size fluctuation. Exons have been regarded as the biologically relevant portions of a
gene, existing under varying degrees of selective pressure, reflective of the relative
advantage they confer upon the organism
possessing the particular allele. However, a
number of recent reports have indicated a
need to reexamine these concepts. The Gart
locus of Drosophila melanogaster, known to
encode three purine pathway enzymatic activities, has been shown to contain an entire
gene encoding a cuticle protein, "nested,"
cuticle protein gene itself is divided by an
intron. Another Drosophila locus, encoding
dopa decarboxylase, has been shown to
share an 88-bp region at its 3' end with the
3' end of a transcript arising from an unknown gene on the opposite strand (2). A
comparable situation has been described for
kayotic gene is that the function of the from the opposite DNA strand (1). The
The Institute for Advanced Biomedical Research, Oregon Health Sciences University, 3181 S.W. Sam Jackson
Park Road, Portland, OR 97201.
*This work is
Herbert.
I5I4-
dedicated
to the
memory
of Edward
&r^rn"ea
ftltO11rP
a rlgonll or mousc nNA
L
cells, BALB/cTS-A-.3T3, which encodes two
3' overlapping transcripts of undetermined
functions (3). The data presented here exerrormiia.o
tend these observatiions to describe the vir2
700-
500-
3
4
25. Y. Hiramato,Exp. Cel Res. 56, 201 (1969).
26. M. King and P. T. Macklem,J. Appl. Physil. Resir.
Environ. Evercics Phrsiol. 42, 797 (1977).
27. M. Sato, T. Z. Wong, R. D. Allen, J. Cell Biol. 97,
1089 (1983).
28. F. H. C. Crick and A. F. W. Hughes, Exp. CcU Res.
1, 37 (1950).
29. K. Yagi, ERp. Biochem. Physiol. 3, 73 (1961).
30. We thank J. Sethna and D. Berry for alerting us to
important modeling work, K. Jayaraman for the use
of his equipment, C. Cohen and J. Condeelis for
stimulating conversations, and J. R. McIntosh for
comments on the manuscript. S.R.H. thanks J.
Condeelis for the hospitality m his laboratory. Supported by NSF grant BNS 8401904. S.R.H. is a
recipient of a Research Career Development Award
from the National Institutes of Health.
21 August 1986; accepted 30 December 1986
tual cohabitation of a genomic locus within
mammalian DNA by two distinct genes.
Both DNA strands serve as templates for
transcription, and the resulting polyadenylated [poly(A)+] RNAs contain a significant amount of shared exonic sequences.
The gonadotropin-releasing hormone
(GnRH) gene is a single-copy gene exhibiting a similar arrangement of four exons in
both rats and humans (4). In the maturation
ofhuman placental preproGnRH messenger
RNA (mRNA), the first intron is not removed and thus the human placental GnRH
mRNA possesses an exceptionally long 5'
untranslated region (5). During experiments
to characterize the hypothalamic form of
GnRH mRNA, human placental GnRH
complementary DNA (cDNA) was nicktranslated and used as a hybridization probe
to screen rat hypothalamic cDNA clones.
DNA sequence analysis demonstrated that
ten of the clones showing hybridization to
this probe represented the hypothalamic
form of preproGnRH mRNA. Surprisingly,
Fig. 1. Northern analysis of rat hypothalamic and
heart poly(A)+ RNA. Duplicate samples of heart
(lanes 2 and 4) and hypothalamic (lanes 1 and 3)
poly(A)+ RNAs were prepared as a Northern blot
and probed with an SP6-generated GnRH (lanes
1 and 2) or SH (lanes 3 and 4) strand-specific
probe. In control hybridizations to Ml3 template
DNAs of defined sequence the SP6 probes were
shown to be completely strand-specific. Size
markers are indicated to the left. Total cellular
RNA was prepared from the indicated rat tissues
by the guanidinium/GsCl method (27) and
poly(A)+ RNAs selected on oligo(dT)-cellulose.
Glyoxal-denatured poly(A)+ RNA (2.5 ,ug per
lane) was fractionated on a 1.4% agarose gel, run
in 10 mM NaPO4 (pH 6.7) (28), and subsequently transferred to Nytran. SP6 strand-specific RNA
probes were generated as described (7). Probes
were labeled to a specific activity of 5 x 0l8
counts per minute per microgram of RNA. Blots
were probed at 60'C in standard hybridization
solution in the presence of 50% formamide.
Filters were washed in .07x standard saline citrate/5 mM EDTA/0.5% SDS at 700C and exposed to x-ray film for 10 hours.
SCIENCE, VOL. 235