Science of the Total Environment 408 (2010) 3787–3793
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Science of the Total Environment
j o u r n a l h o m e p a g e : w w w. e l s ev i e r. c o m / l o c a t e / s c i t o t e n v
Elimination kinetic model for organic chemicals in earthworms
N. Dimitrova a,⁎, S. Dimitrov a, D. Georgieva a, C.A.M. Van Gestel b, P. Hankard c,
D. Spurgeon c, H. Li d, O. Mekenyan a
a
Laboratory of Mathematical Chemistry, University “Prof. As. Zlatarov,” 8010 Bourgas, Bulgaria
Department of Animal Ecology, Vrije Universiteit, De Boelelaan 1085, 1081 HV Amsterdam, The Netherlands
Centre for Ecology and Hydrology, Maclean Building, Benson Lane, Crowmarsh Gifford, Wallingford, Oxon, OX10 8BB, United Kingdom
d
NERC Centre for Ecology and Hydrology, Lancaster Environment Centre, Bailrigg, Lancaster LA1 4AP, United Kingdom
b
c
a r t i c l e
i n f o
Article history:
Received 31 July 2009
Received in revised form 29 January 2010
Accepted 29 January 2010
Available online 25 February 2010
Keywords:
QSAR
Elimination
PAHs
Earthworms
a b s t r a c t
Mechanistic understanding of bioaccumulation in different organisms and environments should take into
account the influence of organism and chemical depending factors on the uptake and elimination kinetics of
chemicals. Lipophilicity, metabolism, sorption (bioavailability) and biodegradation of chemicals are among the
important factors that may significantly affect the bioaccumulation process in soil organisms. This study attempts
to model elimination kinetics of organic chemicals in earthworms by accounting for the effects of both chemical
and biological properties, including metabolism. The modeling approach that has been developed is based on the
concept for simulating metabolism used in the BCF base-line model developed for predicting bioaccumulation in
fish. Metabolism was explicitly accounted for by making use of the TIMES engine for simulation of metabolism
and a set of principal transformations. Kinetic characteristics of transformations were estimated on the basis of
observed kinetics data for the elimination of organic chemicals from earthworms.
© 2010 Elsevier B.V. All rights reserved.
1. Introduction
Earthworms live in close contact with the soil and because they
represent a major part of the diet of many vertebrate species they could
be considered as representatives for the bioavailability of chemicals at
contaminated sites (Jager et al., 2000, 2005). Compared to aquatic
organisms such as fish, limited bioconcentration data are available for
earthworms, which makes modeling of the chemical fate in these
organisms a challenging task. Knowledge and experience gained from
modeling bioaccumulation in other species could be of help in order to
build an easy interpretable and mechanistically sound model for
interaction between industrial pollutants and earthworms. Utilisation
and adaptation of existing tools may, thus, provide a means of predicting
the potential accumulation of organic chemicals in earthworms.
Mechanistic understanding of bioaccumulation in different organisms should take into account both the influence of organism and also
chemical depending factors on uptake and elimination kinetics.
Lipophilicity, metabolism and biodegradation of chemicals in soil are
among the factors that may significantly affect the bioaccumulation in
soil organisms. Among the organism dependent factors, rate of
metabolism is the most important parameter that needs to be
considered. This study aims to develop a model that can be used to
estimate the elimination kinetics of organic chemicals in earthworms by
⁎ Corresponding author. Laboratory of Mathematical Chemistry, University “Prof. As.
Zlatarov,” “Yakimov” St. #1″ 8010 Bourgas, Bulgaria. Tel.: + 359 56 858388.
E-mail address:
[email protected] (N. Dimitrova).
0048-9697/$ – see front matter © 2010 Elsevier B.V. All rights reserved.
doi:10.1016/j.scitotenv.2010.01.064
accounting for their metabolic potential. The simulator of metabolism in
earthworms was built hypothesizing that the principal transformations
used by different organisms are similar and the main differences are in
their rates of process or enzymes involved in the control of xenobiotic
metabolisms (Brown et al., 2004). For example, comparison of
metabolism of pyrene in invertebrates and vertebrates showed that
the only one major phase I metabolite is 1-hydroxypyrene which is then
further metabolised to pyrene-1-glucuronide, pyrene-1-glucoside,
pyrene-1-sulfate, or pyrene-1-O-(6″-O-malonyl)glucoside (Giessing
et al., 2003; Stroomberg et al., 2004). There is also some evidence that
earthworms actually have a limited rate of metabolism compared to
other species (Stroomberg et al., 2004). The rates of metabolism for
different transformations were accounted for by calculating the
probabilities of occurrence for each. In order to fit the kinetic curves of
elimination, the probabilities were expressed as a function of time,
assuming first order kinetics.
2. Materials and methods
2.1. Elimination kinetic data
Elimination kinetic data for 28 structurally similar organic
chemicals in earthworms (Eisenia fetida) were extracted from the
literature (Belfroid et al., 1994, 1995, Jager et al., 2003, 2005 and
Matscheko et al., 2002) and used to build the present model. These
chemicals include 12 polycyclic aromatic hydrocarbons (PAHs), two
N- and S-heterocyclic polyaromatic chemicals (PACs), two PAC-
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N. Dimitrova et al. / Science of the Total Environment 408 (2010) 3787–3793
quinones, seven polychlorinated biphenyls and five cyclic organochlorinated chemicals. The data set also includes one study on lindane
elimination from the enchytraeid Enchytraeus albidus (Amorim et al.,
2002). Chemical names and relative concentrations in earthworms at
different days after transfer from a contaminated soil to a clean soil
are presented in Table 1.
For further refinement and testing of the model, an additional set of
data for elimination of PAHs in earthworms was generated within the
framework of the NoMiracle project. NoMiracle (contract no. 003956
under the Sixth Framework Programme) is an international project
aiming to support the development and improvement of a coherent
series of methodologies that will improve both human and environmental risk assessment procedure. The NoMiracle has 38 partners
from 17 European countries competent in human toxicology and
epidemiology, aquatic and terrestrial ecotoxicology, environmental
chemistry/biochemistry, toxicogenomics, physics, mathematical modeling, geographic informatics, and socio-economic science. The data
came from a study in which the epigeic soil dwelling worm Lumbricus
rubellus was exposed to a field soil collected from an area adjacent to a
factory producing carbon black by partial combustion and pyrolysis of
oils. The soil for the study was collected from a site in south-west
England (Ordnance Survey Grid Reference ST 539816). Soil from the
top 5 cm of the soil profile was collected from 5 sample points
representing the corners and centre of a 10 m × 10 m plot and mixed to
produce a single batch. Mixed soil was sieved through a 10 mm sieve to
remove large roots and stones and then 300 g placed into a series of
plastic container. Soils were then wetted by addition of a further 15 ml
of water in addition to the existing water present in the field soil and
after 24 h a single adult L. rubellus obtained from a field collected
population obtained from a commercial supplier (Neptune Ecology,
Ipswich, UK) was added to each pot. PAH concentrations in the worms
were measured at the start of the experiment. Containers were then
sealed with a plastic lid. No food was added.
In total 33 separate containers were set-up and left for 168 h at 12±
1 °C under a 16 hr light 8 hr dark regime to allow the added worm to
accumulate PAHs from the test soils. At the end of this accumulation
phase, the worms were removed from the polluted field soil and placed
in a clean clay loam soil (Broughton Loams, Kettering, UK) amended
with an additional 3% organic matter (CamBark, LBS Horticultural, Colne,
UK). At the end of the 168 hr accumulation and at a further 10 timepoints of 4, 8, 16, 20, 26, 40, 56, 80, 112 and 164 h of the elimination,
three worms were removed from the clean soil and snap frozen by
immediate emersion in liquid N2 and then stored at −20 °C for later
analysis of concentrations of 15 PAHs (naphthalene, acenaphthylene,
acenaphthene, fluorene, phenanthrene, anthracene, fluoranthene, pyrene, benz[a]anthracene, chrysene, benzo[k]fluoranthene, benzo[a]pyrene, ideno[1,2,3-cd]pyrene, dibenz[a,h]anthracene, benzo[g,h,i]
perylene). Time points were spaced with sufficient sampling time at
the start of the elimination but also some later sample times to allow the
capture of fast and slow kinetic changes in tissue PAH concentrations.
The analysis for PAH content of the obtained earthworm samples
was conducted by gas chromatography mass spectrometry of dichloromethane extracts following the procedure outline in Hankard et al.
(2004) and Meharg et al. (1998). Appropriate standards, spiked samples
and blanks were included to ensure the robustness of the analysis in
accordance with QA requirements. The data obtained from the field soil
PAH kinetic study conducted for L. rubellus are presented in Table 2.
These data were used as an external validation set providing information
about the interlaboratory variation and model performance.
A database with 433 documented biotransformation maps was
collected from the literature and stored in electronic format in a
metabolism database. The collected metabolic maps were used to
develop a library of principal molecular transformations. It contains
43 Phase I and Phase II metabolic transformations. Some principal
transformations and their formal kinetic constants are listed in
Table 3.
Table 1
Relative concentrations in earthworms of training chemicals at different times normalized
to the concentration at the beginning of the elimination process (day 0) used to build the
model. The elimination kinetic data for 28 structurally similar organic chemicals in
earthworms (Eisenia fetida) were extracted from the literature (Amorim et al., 2002a,
Belfroid et al., 1994, 1995, Jager et al., 2003, 2005 and Matscheko et al., 2002).
#
Compound
Time of elimination
[day]
Relative concentration
in worm
1
Dibenzo[a]anthracene
2
Dibenzothiophene
3
9,10-Anthraquinone
4
1,2-Benzoanthraquinone
5
Anthracene
6
Indeno[cd]pyrene
7
Benzo[ghi]perylene
8
Carbazole
9
Chrysene
10
Benzo[b]fluoranthene
11
Benzo[k]fluoranthene
12
Benzo[a]pyrene
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
1.00
0.91
0.91
0.85
0.89
0.82
1.00
0.97
0.93
0.90
0.88
0.88
1.00
0.84
0.80
0.78
0.75
0.74
1.00
0.97
0.95
0.94
0.93
0.93
1.00
0.82
0.61
0.48
0.38
0.38
1.00
0.91
0.84
0.62
0.67
0.54
1.00
0.80
0.82
0.66
0.68
0.60
1.00
0.94
0.90
0.90
0.88
0.88
1.00
0.12
0.14
0.02
0.01
0.01
1.00
0.61
0.67
0.45
0.41
0.28
1.00
0.61
0.67
0.45
0.41
0.28
1.00
0.67
0.55
0.37
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N. Dimitrova et al. / Science of the Total Environment 408 (2010) 3787–3793
Table 1 (continued)
#
Compound
13
Phenanthrene
14
Fluoranthene
15
Pyrene
16
Benzo[a]anthracene
17
Lindanea
18
Dieldrin
19
Hexachlorobenzene
20
Pentachlorobenzene
21
1,2,3,4-Tetrachlorobenzene
22
2,3′,4,4′,5Pentachlorobiphenyl
23
2,4,5,2′,4′,5′Hexachlorobiphenyl
Table 1 (continued)
Time of elimination
[day]
Relative concentration
in worm
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
1
3
6
10
14
0
0.5
1
2
3
5
7
10
0
1
3
7
14
0
3
6
9
13
19
27
33
0
3
6
9
19
27
33
0
0.5
1
2
3
5
9
13
0
1
2
7
14
22
33
47
0
1
2
7
14
22
0.41
0.25
1.00
0.50
0.37
0.30
0.15
0.14
1.00
0.35
0.02
0.00
0.00
0.00
1.00
0.37
0.14
0.05
0.01
0.01
1.00
0.50
0.61
0.37
0.25
0.25
1
0.69
0.40
0.35
0.23
0.20
0.11
0.15
1
0.50
0.20
0.15
0.10
1
0.43
0.10
0.03
0.02
0.008
0.007
0.005
1
0.1
0.006
0.004
0.002
0.0003
0.0006
1
0.531
0.094
0.050
0.028
0.022
0.005
0.002
1
0.31
0.31
0.24
0.15
0.13
0.15
0.09
1
0.95
0.65
0.63
0.45
0.43
(continued on next page)
#
Compound
24
2,2′,3′,4,4′,5Hexachlorobiphenyl
25
2,2′,3,4,4′,5,5′
Heptachlorobiphenyl
26
2,4,5,2′,5′Pentachlorobiphenyl
27
2,3,3′,4,4′,5Hexachlorobiphenyl
28
2,4,5,3′,4′,5′Hexachlorobiphenyl
a
Time of elimination
[day]
Relative concentration
in worm
33
47
0
1
2
7
14
22
33
47
0
1
2
7
14
22
33
47
0
1
2
7
14
22
33
47
0
1
2
7
14
22
33
47
0
1
2
7
14
22
33
47
0.18
0.25
1
1
0.74
0.69
0.49
0.46
0..31
0.27
1
1.1
0.78
0.78
0.67
0.72
0.44
0.72
1
0.93
0.68
0.64
0.36
0.15
0.14
0.11
1
0.60
0.45
0.81
0.42
0.57
0.33
0.30
1
0.69
0.63
0.65
0.44
0.44
0.39
0.39
Enchytraeus albidus.
2.2. Mathematical formalism of the model
Within any study that examines the time-dependent pattern of
change in body concentration of chemicals in organisms previously
exposed, but currently maintained in a clean environment, the
decrease of body concentrations may be due to different processes.
• Elimination driven by the chemical lipophilicity and concentration
gradient,
• conversion of the compound into metabolites by biotransformation,
and
• growth, leading to dilution of the chemical concentration in the
organism.
Because there was no sufficient experimental information in either
the literature or experimental study to account for the effect of growth
on body concentrations, only the two first processes were accounted
for within the developed model. The elimination kinetics of chemicals
were modeled with a first order kinetics model:
½A
= exp ð−km t Þ exp ½ða + bX Þt
½A0
where:
[A]0
[A]
initial concentration of chemical A, mol/l
concentration of chemical A at time t, mol/l
ð1Þ
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N. Dimitrova et al. / Science of the Total Environment 408 (2010) 3787–3793
Table 2
Data on the elimination kinetics of polycyclic aromatic hydrocarbons from Lumbricus
rubellus generated within the framework of the NoMiracle project and used as an
external validation set for developing the model.
#
Compound
Time of
elimination
[hours]
Concentration
in worm
[ng/g wet weight]
Relative
concentration
in worm
1
Phenanthrene
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
269
243
55.4
69.1
50.2
58.7
53.8
41.1
40.8
69.2
32.3
78.8
84.0
49.5
24.7
24.2
32.8
21.6
38.1
28.8
59.2
11.4
282
279
141
191
101
133
97.2
98.5
116
180
126
411
322
156
196
107
127
99.0
100
120
159
130
152
97.5
40.9
81.6
43.7
56.4
30.4
38.8
49.3
211
90.0
282
211
81.5
136
75.7
95.7
58.7
77.5
91.5
225
162
197
149
124
187
102
1
0.90
0.20
0.26
0.19
0.22
0.20
0.15
0.15
0.26
0.12
1
1.07
0.63
0.31
0.31
0.42
0.27
0.49
0.37
0.75
0.15
1
0.99
0.50
0.68
0.36
0.47
0.34
0.35
0.41
0.64
0.45
1
0.78
0.38
0.48
0.26
0.31
0.24
0.24
0.29
0.39
0.32
1
0.64
0.27
0.54
0.29
0.37
0.20
0.26
0.32
1.39
0.59
1
0.75
0.29
0.48
0.27
0.34
0.21
0.28
0.32
0.80
0.57
1
0.76
0.62
0.94
0.51
2
3
4
5
6
7
Anthracene
Fluoranthene
Pyrene
Benz[a]anthracene
Chrysene
Benzo[k]fluoranthene
Table 2 (continued)
#
Compound
8
Benzo[a]pyrene
9
Ideno[1,2,3-cd]pyrene
10
Dibenz[a,h]anthracene
11
Benzo[g,h,i]perylene
km
X
Time of
elimination
[hours]
Concentration
in worm
[ng/g wet weight]
Relative
concentration
in worm
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
0
4
8
16
20
26
40
56
80
112
164
134
71.2
105
103
174
177
77.3
82.8
52.0
119
22.2
62.6
28.4
92.5
80.0
177
197
159
6.85
0
10.9
5.58
0
0
0
7.5
61.6
21.1
51.3
198
25.4
119
85.2
0
19.4
29.3
122
95.6
101
85.7
110.
38.4
59.0
23.6
41.2
16.7
19.7
31.1
77.3
55.6
0.68
0.36
0.53
0.52
0.88
0.90
1
1.07
0.67
1.53
0.93
0.81
0.37
1.19
1.04
2.29
2.55
1
0.043
0
0.068
0.035
0
0
0
0.047
0.39
0.13
1
3.86
0.50
2.32
1.66
0
0.38
0.57
2.36
1.87
1.98
1
1.28
0.45
0.69
0.28
0.48
0.19
0.23
0.36
0.90
0.65
formal kinetic constants of metabolism, day− 1
explanatory variables accounting for other mitigating
factors such as hydrophobicity (log KOW), molecular size
(maximum diameter averaged across all energetically
stable conformers, Dmax.aver) and water solubility (SW).
The simulation of metabolism is based on the Tissue Metabolism
Simulator (TIMES) engine developed in the Laboratory of Mathematical
Chemistry of the University “Prof. As. Zlatarov,” Bourgas, Bulgaria, for
simulation of catabolic and metabolic transformations (Jaworska et al.,
2002 and Mekenyan et al., 2004). The core part of the metabolism
simulator is a set of hierarchically ordered principal molecular
transformations. Mathematical formalism, characteristics and hierarchy
of transformations, as well as the rules for their application reflect the
specificity of the modeled phenomenon. For example, in the recently
developed model for predicting bioconcentration in fish (Dimitrov et al.,
2005a), one of its important components is the simulator of fish
metabolism. Because experimentally determined bioconcentration
generally is related to the parent chemicals, the simulation of
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N. Dimitrova et al. / Science of the Total Environment 408 (2010) 3787–3793
Table 3
Representative list of principal transformations used to simulate metabolism in earthworms.
ki, d− 1
#
Type of reaction
Transformation
2
Phase I
3
Phase I
28
Phase I
31
Phase II
32
Phase II
Mercapturic acid conjugation
0.047
40
Phase I
Benzene C-hydroxylation
0.83
Arhene oxidation
0.0070
Arhene oxidation
0.0092
Dehalogenation
0.056
Glutathione conjugation
0.0025
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metabolism was focused predominantly on the parent chemicals. The
same approach was applied in this study for the development of a model
for elimination of organic chemicals from earthworms. According to the
probabilistic approach, metabolic transformations are characterized by
probabilities of their occurrence. In order to reproduce kinetic data these
probabilities were expressed as a function of time assuming first order
kinetics (Dimitrov et al., 2007):
Pi = ð1− expð−ki t ÞÞ
ð2Þ
ki = − ln ð1−Pi Þ = t
ð3Þ
where ki day− 1, is a surrogate of the first order kinetic constant of ith
transformation. The formal kinetic constant km of the metabolism of a
chemical into different products is determined as the sum of kinetic
constants of the transformations used in the metabolic process:
I
km = ∑ ki
ð4Þ
i=1
The non-linear least square method (Marquardt, 1963) was used
to estimate the model parameters a, b and ki by minimizing the sum of
squares of residuals:
Obs
min SSR = ∑ ∑
a;b;ki
j
t
Calc
Ajt
Ajt
−
Aj0
Aj0
!2
ð5Þ
where j and t are indexes corresponding to different chemicals and
time. Depending on the use of various explanatory variables X (see
Eq. (1)) different models were obtained based on the fit with the
experimental data. Model quality was estimated on the basis of the
sum of squares of residuals (SSRs), coefficients of determination (R2)
and variances (s2).
2.3. Model applicability domain
A stepwise approach for determining the model applicability
domain has been proposed recently (Dimitrov et al., 2005b). It
accounts for the variation of parameters that could affect the
bioavalability of chemicals (general requirements), structural similarity (structural domain), mechanistic background of the model
(mechanistic domain), and performance of the simulator of metabolism (metabolism domain). The first two steps of the model
applicability domain have been accounted for in the present kinetic
model: domain of general parametric requirements and structural
domain. The domain of general parametric requirements includes the
range of variation of hydrophobicity (log KOW), molecular weight
(MW) and water solubility (SW) of the chemicals in the training data
set. Chemicals with MW from 167 to 395 Da, log KOW in the range of 3.0
to 8. 0 and SW in the range of 1.8·10− 4 to 21 mg/l, respectively were
assigned to belong to the domain. EPI Suite Estimation Software
(http://www.syrres.com/) was used to calculate log KOW and SW. The
structural component of the model domain is based on the structural
similarity between chemicals in the training set and the target
chemical. The atom-centered fragments (ACFs) accounting for the
first neighbors, hybridization and attached H-atoms were used as
characteristics of the chemical structure. If atoms from an aromatic
ring are first neighbors then the whole ring is added to the ACFs; the
same holds for the sequences of three heteroatoms, which are also
considered as first neighbors if one of their atoms is among the first
neighbors. ACFs extracted from the training set of chemicals were used
to define the structural domain of the model. Each target chemical is
also partitioned to ACFs. A chemical is classified to belong to the
structural domain if all its ACFs are found in the set of ACFs extracted
Table 4
Fitted kinetic models, explanatory variables used and corresponding statistics.
Model
Explanatory
variables
SSR
R2
s2
16
0.00
0.14
1.
½A
½A0
= exp ½ða + b logKOW Þt
log KOW
2.
½A
½A0
= exp ð−km t Þ
km
3.4
0.78
0.03
3.
½A
½A0
= exp ð−km t Þ exp ½ða + b logKOW Þt
km, log KOW
3.0
0.81
0.03
4.
½A
½A0
= exp ð−km t Þ exp ½ða + bDmax:aver Þt
km, Dmax.aver
3.0
0.81
0.02
5.
½A
½A0
= exp ð−km t Þ exp ½ða + bSW Þt
km, SW
3.0
0.81
0.02
from the training chemicals. Both domains (general requirements and
structural domain) determine the total model domain.
3. Results and discussion
The statistical characteristics of model (1) depending on included
explanatory variables are presented in Table 4. As can be seen from
the table, hydrophobicity (log KOW) as a single model variable was
unable to reproduce simultaneously the kinetics data for all chemicals.
However, good statistical fits with this model (not shown in the table)
were obtained when each kinetic curve was fitted separately to the
available data. This is an indication that log KOW is not a universal
parameter for the explanation of chemicals' elimination from
organisms and the fits obtained for the separate curve reflect the
implementation of chemical specificity in the adjusted model
parameters a and b. Model fits demonstrate that metabolism appears
to be the most significant factor controlling elimination kinetics
(Table 4). Combining metabolism with log KOW, Dmax.aver or SW does
not improve statistics significantly. The range of variation of these
parameters within the training set cannot be ignored and potential
explanation for their non-significance is that for the studied chemicals
metabolism dominates over the other factors. From a mechanistic
point of view the role of hydrophobicity was expected to be more
substantial for non-metabolizing chemicals. In Fig. 1 the concentrations fitted and predicted by models (1) and (3) from Table 4 are
presented. The predictions by model (1) are based on log KOW only,
whereas the simulated metabolism is added in model (2).
Fig. 1. Parity plot of observed and predicted relative concentrations in earthworms:
○ — model (1) from Table 4 and ● — model (3) from Table 4.
N. Dimitrova et al. / Science of the Total Environment 408 (2010) 3787–3793
3793
factor for the elimination of studied chemicals. This is even though there
are some suggestions from the literature that the rates of metabolism of
some organic chemicals may be comparatively low compared to some
other groups of organisms (Stroomberg et al., 2004). Within the studied
chemical space, the addition of other factors in the model practically did
not affect its quality. The significance of these factors is expected to be
pronounced when the training set is expanded. Based on 15 additional
chemicals tested within the framework of the NoMiracle project and
using L. rubellus as the test species it was showed that model predictions
were comparable with the variation of experimental data. Due to the
small number of the training set chemicals the applicability domain
of the current elimination model is relatively restricted. Thus, further
toxicokinetic data relating to the elimination of organic chemicals
by earthworms are needed to support the development of more
comprehensive prediction of organic chemical accumulating and
metabolism such has been possible in studies with fish (Dimitrov
et al., 2005a).
Acknowledgement
Fig. 2. Interlaboratory variation of data and model predictions for Chrysene elimination
from earthworms: ● — Eisenia fetida data from Matscheko et al., 2002, ▲ — Lumbricus
rubellus data from the NoMiracle project, and — model (3) from Table 4.
This work was partially supported by the international NoMiracle
contract no. 003956 under the Sixth Framework Programme (FP6).
References
The performance of the model that was developed based on
available literature data was investigated by assessing predictive
power against an independent data set that was not used in model
development. Within the framework of the NoMiracle project the
elimination of 15 PAHs was studied in L. rubellus that had been
previously exposed (Table 2). Four of the new tested chemicals
(acenaphthene; fluorene; naphthalene and acenaphthylene) were
outside the model domain mainly due to the incomplete metabolic
information implemented in the current simulator (lack of molecular
transformation to implement all biotransformations needed for the
elimination of the chemicals). For the remaining 11 chemicals
experimental data were already found in literature and used in the
model building. This provided an opportunity to evaluate data
variation. Direct comparison of data was impossible because the
concentrations reported in the literature for E. fetida and these
obtained for L. rubellus within the project were measured at different
time intervals from the beginning of the elimination phase. However,
graphical comparison of kinetic data showed that in some cases
discrepancy could be greater than 50%. As an illustration of the
interlaboratory variation of data and model predictions in Fig. 2
observed and predicted concentration for Chrysene are shown. Except
for two outliers good interlaboratory and model compatibility is
demonstrated for the whole duration of the studied elimination
period. Similar or worse results were found for the remaining
chemicals tested in the project frame. Because the model predictions
are within the variation of experimental data it could be assumed that
the model adequately predicts the elimination concentration of
chemicals falling in its applicability domain.
4. Conclusion
A kinetic model for the elimination of polycyclic aromatic chemicals
from earthworms (E. fetida) was developed in this study. The model
includes a simulator of metabolism containing 43 Phase I and Phase II
principal metabolic transformations. Model building was based on the
assumption of first order kinetics for each transformation. The
mathematical formalism allows other properties, such as molecular
size, water solubility and hydrophobicity, to be also accounted for in the
model. Experimental kinetic data for the elimination of 28 PACs
collected from the literature were used to determine the model
parameters. Results showed that metabolism is the most important
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