Functional magnetic resonance imaging of the
visual system
Atsushi Miki, MD, PhD, Grant T. Liu, MD, Edward J. Modestino, Mphil,
Chia-Shang J. Liu, BA, Gabrielle R. Bonhomme, MD, Cristian M. Dobre, MS, and
John C. Haselgrove, PhD
Functional magnetic resonance imaging (fMRI), which is a
technique useful for non-invasive mapping of brain function, is
well suited for studying the visual system. This review
highlights current clinical applications and research studies
involving patients with visual deficits. Relevant reports
regarding the investigation of the brain’s role in visual
processing and some newer fMRI techniques are also
reviewed. Functional magnetic resonance imaging has been
used for presurgical mapping of visual cortex in patients with
brain lesions and for studying patients with amblyopia, optic
neuritis, and residual vision in homonymous hemianopia.
Retinotopic borders, motion processing, and visual attention
have been the topics of several fMRI studies. These reports
suggest that fMRI can be useful in clinical and research
studies in patients with visual deficits. Curr Opin Ophthalmol 2001,
12:423–431 © 2001 Lippincott Williams & Wilkins, Inc.
Division of Neuro-Ophthalmology, University of Pennsylvania School of Medicine;
and the Functional MRI Research Unit; the Children’s Hospital of Philadelphia;
Philadelphia, Pennsylvania, USA.
Correspondence to Dr. Grant T. Liu, MD, Division of Neuro-ophthalmology,
Department of Neurology, Hospital of the University of Pennsylvania, 3400
Spruce St., Philadelphia, PA 19104, USA; e-mail:
[email protected]
Current Opinion in Ophthalmology 2001, 12:423–431
ISSN 1040–8738 © 2001 Lippincott Williams & Wilkins, Inc.
Functional magnetic resonance imaging (fMRI) is a relatively new neuroimaging technique that can detect neural activation noninvasively in the human brain. Functional MRI is based on the assumption that local
neuronal activity correlates with increases in regional cerebral blood flow [1]. The advantages of this method
include: 1) high spatial and temporal resolution (ie, small
areas of the brain can be sampled at relatively fast rates);
2) no ionizing radiation or exogenous contrast agent is
necessary; 3) and many images can be obtained from a
single subject because of 1 and 2. For these reasons,
fMRI is superior to other functional imaging techniques,
such as positron emission tomography (PET) or single
photon emission computed tomography (SPECT). Although electroencephalography (EEG) and magnetoencephalography (MEG) provide higher temporal resolution, fMRI has much better spatial resolution. Functional
magnetic resonance imaging can be implemented on
many clinical MR scanners with relatively low cost.
Functional magnetic resonance imaging
and the blood oxygenation level dependent
contrast method
In most fMRI studies, neuronal activity is detected using
the blood oxygenation level dependent (BOLD) contrast
method (Fig. 1). The principle behind this technique is
as follows: during focal neural activation, oxygen consumption increases, but there is a much greater increase
in regional blood flow. As a result, the relative concentration of deoxyhemoglobin decreases in this area. As
deoxyhemoglobin is paramagnetic, this phenomenon
causes an increase in signal intensity with specific MRI
pulse sequences sensitive to the inhomogeneity of magnetic fields [2] (see “Alternative fMRI methods”). Thus,
deoxyhemoglobin acts as an endogenous contrast agent
in the BOLD contrast method.
Data acquisition and analysis
Data acquisition
Fast imaging techniques, such as echo planar imaging
(EPI), are capable of acquiring one scan from the whole
brain in a few seconds. In most cases, the total acquisition time should not be too long (less than one hour) to
avoid habituation, fatigue, and large head movements
during the session. However, longer studies may be conducted in psychological experiments. Many scanners operating at 1.5 Tesla (T) have been used for fMRI scans,
but scanners at higher magnetic field strengths are de423
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Figure 1. Blood oxygenation level dependent (BOLD) contrast
technique
pensates for static magnetic field inhomogeneities, is
essential for detecting subtle magnetic field inhomogeneities caused by the change in oxygenation level
of hemoglobin.
Data analysis
Before statistical evaluation, motion correction of the
subject’s head movements is usually performed because
head movements are inevitable despite the head constraints; the head movements can produce spurious activation or mask real activation. Spatial normalization of
the images to standard brain space can be performed to
facilitate group data analysis and identification of activated regions in standard coordinates.
Top) Relative concentrations of oxyhemoglobin and deoxyhemoglobin in an
arteriole/venule interface in resting cortex. Bottom) During neuronal activaty, a
presumed coupling with blood flow occurs. Oxygen extraction takes place, but a
relatively larger compensatory increase in blood flow leads to a decrease in
deoxyhemoglobin concentration in the venule. Since deoxyhemoglobin is
paramagnetic, this leads to a local increase in signal in T2*-weighted magnetic
resonance images. Adapted with permission from Cohen MS, Bookheimer SY.
Localization of brain function using magnetic resonance imaging. Trends in
Neurosci 1994;17:268–277.
sirable for accurate localization of brain function because
of the high sensitivity and high specificity for gray matter
activity [3]. Recently, ultra-high field scanners operating
at 7 or 8 T have become available [4].
Experimental design
Normally, MR images are obtained during both baseline
(eg, lights off) and activation (eg, task - lights on) conditions, and changes from the baseline condition are
sought. The pair of off-on conditions is repeated several
times to enhance the statistical power of detecting taskinduced neural activation. The baseline condition does
not need to be a “resting condition” and can be another
active task, depending on the kind of brain activity that
one is searching (eg, no motion vs motion). Therefore, a
variety of task paradigms are possible. Although the task
conditions are often blocked (“blocked design”), in
which one block (or “epoch”) typically lasts 15 to 40
seconds, “event-related design” can make use of very
short stimuli lasting for a few hundred milliseconds.
Characteristics of time course of signal intensity
The hemodynamic response of the brain is much slower
than the neural activity. Accordingly, the signal increase
and decrease is delayed by approximately 6 seconds after
the onset and offset of the stimulus. The signal change
(between the active and control conditions) in fMRI is
relatively small (frequently 0.5–5% at 1.5 T), and statistical procedures are necessary to delineate the areas of
“activation.” A procedure called shimming, which com-
Functional images are analyzed by comparing different
states of neural activity. Regions with statistically significant signal intensity changes (task vs baseline, for instance) are classified as “activated pixels” according to a
statistical threshold (eg, p < .001). These areas can be
localized by overlaying the functional images on the corresponding high-resolution anatomic (structural-often
T1-weighted) images, which are often conveniently acquired in the same session but in an independent scan.
Applications of functional magnetic
resonance imaging for the human
visual system
Activation of the geniculocalcarine and extrastriate pathways can be studied with fMRI. Although various brain
regions (sensorimotor cortex, auditory cortex, language
regions, for example) have been mapped, visual cortex
activation is easily detected because the associated signal
changes are so robust. In addition, activation of the lateral geniculate nucleus can be imaged (Fig. 2, also see
“fMRI of lateral geniculate nucleus”). Retinotopic organization of visual cortex (see “Retinotopic mapping”),
including the areas corresponding to the peripheral temporal visual fields [5], has been confirmed using fMRI.
An optimal check size of 0.5 degrees of visual angle for
checkerboard stimulation has also been studied [6].
Clinical applications
Presurgical mapping of visual cortex
Presurgical mapping of visual cortex is a straightforward
clinical application of fMRI. Hirsch et al. [7] compared
visual fields and preoperative fMRI in six patients with
homonymous visual field defects. In all six patients,
fMRI results were consistent with visual field examinations. Presurgical mapping has also been performed in
children (Fig. 3) [8,9]. However, although fMRI maps
generally agree with patients’ visual fields [10–12], careful interpretation of negative fMRI findings is necessary
becasue regions adjacent to lesions may have altered
BOLD effects owing to a loss of autoregulation, for instance [13,14].
Functional magnetic resonance image of the visual system Miki et al.
425
Figure 2. Bilateral activation of lateral geniculate nucleus
A statistical map overlaid on the SPM T1-template
(standard brain) showing bilateral activation of visual
cortex and LGN during flash visual stimulation. This
statistical map was created with a group data analysis
from 10 normal subjects’ data. The data were motion
corrected and spatially normalized prior to the statistical
analysis. The intersection of crosshairs shows the location
of right LGN.
Optic neuritis
Werring et al. [15•] studied seven patients who recovered from a single episode of unilateral acute optic neuritis. All patients had normal visual acuity and color vision (Ishihara color plates), but two patients showed
delayed latency in the pattern-reversal visual evoked potential (VEP) and five patients had abnormal MRI of the
optic nerve. The patients had no other lesions on brain
MRI. In normal control volunteers, activation by the
stimulation of either eye was shown in visual cortex.
Stimulation of the clinically unaffected eye in patients
induced additional activation in the right insulaclaustrum. Stimulation of the recovered eye from optic
neuritis induced extensive activation of bilateral insulaclaustrum, orbitofrontal cortex, lateral temporal cortex,
posterior parietal cortex, thalamus, and corpus striatum.
There was a positive correlation between the volume of
extraoccipital activation and latency in the patternreversal VEP. Because these extraoccipital areas are
known to have connections with visual areas, the authors
suggested that the extraoccipital network might represent an adaptive response to the VEP delay, which could
contribute to the recovery process. Comparison between
the maps of patients and those of control subjects
showed a greater response in visual cortex in controls
compared with patients for both affected and unaffected
eyes. The abnormal fMRI response in the “unaffected”
eyes is consistent with a previous fMRI study [16]. Although some researchers expect better sensitivity of
fMRI over electrophysiologic recordings or MRI [17],
the sensitivity and interpretation of fMRI in this setting
remains to be investigated in detail.
Functional magnetic resonance imaging
studies in amblyopia
Three articles compared monocular fMRI activation of
striate and extrastriate visual cortex in unilateral amblyopia. Goodyear et al. [18•] studied four patients with
unilateral anisometropic/strabismic amblyopia using
fMRI at 4T while the patients viewed vertical sinusoidal
gratings at six spatial frequencies. A good relationship
between fMRI response in early visual areas (V1 and
possibly including V2) and psychophysical measurement
of the perception of 22 % contrast was obtained in all
control subjects and patients. Whereas three patients
showed similar levels of activation by either the good eye
or amblyopic eye, one patient showed smaller signal increases in early visual areas by the amblyopic eye, especially with the visual stimuli at higher spatial frequencies. However, the average number of activated voxels
was significantly decreased at higher spatial frequencies
for the four patients with amblyopia. They ascribed
these findings to the hypothesis that fewer neurons are
active for amblyopic eyes, but the average firing rate of
the neurons is unaffected in amblyopia.
Barnes et al. [19•] studied visual cortex activation in 10
patients with unilateral strabismic amblyopia. The pa-
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tients viewed radial sinusoidal grating stimuli with different spatial frequencies. LCD shutter glasses were
used to achieve monocular stimulation. A lower spatial
frequency well within and a higher spatial frequency
above or close to the subject’s amblyopic acuity were
used for each patient. In most but not all patients, decreased cortical activation was observed when the amblyopic eye was stimulated. The higher spatial frequency stimuli produced larger differences between
normal and amblyopic activation. However, the decrease
did not seem to relate to the subjects’ visual acuity. Also,
the contrast sensitivity difference did not correlate with
the difference in BOLD signal change. Stimuli with high
spatial frequency that are invisible to the amblyopic eye
did produce activation of V3A in two patients. Using
brain flattening and retinotopic mapping techniques,
they showed that there was reduction in monocular activation for the amblyopic eyes in both V1 and V2.
Therefore, they concluded that V1 is the earliest anomalous site in amblyopia.
Lee et al. [20] studied 5 patients with strabismic amblyopia and 6 patients with anisometropic amblyopia. Blackand-white checkerboards at a spatial frequency of 0.25,
0.5, 1, or 2 cycles per degree of visual angle were used for
monocular visual stimulation. Binocular voxel indices
(calculated from the number of suprathreshold voxels)
were significantly lower in the strabismic amblyopes
than in the anisometropic amblyopes. A stronger correlation of signal changes between the amblyopic eye
stimulation and defocused normal eye stimulation was
found in the anisometropic amblyopes than in the strabismic amblyopes. These findings seem to support the
hypothesis that strabismic amblyopia results from the
breakdown of binocular interaction. The response to
higher-spatial-frequency stimulation was reduced in the
anisometropic group but not in the strabismic group.
The latter finding is consistent with the notion that anisometropic amblyopia results from selective undersampling of visual images at high spatial frequencies.
In anisometropic amblyopia, preliminary studies using
fMRI also have shown decreased activation of motion
sensitive cortex [21], shifts in ocular dominance in primary visual cortex [22], and differences in visual cortex
activation by magno- and parvocellular stimuli [23].
Functional magnetic resonance imaging
studies in patients with
retrochiasmal lesions
Rausch et al. [24•] reported fMRI findings from three
patients with cortical blindness (residual rudimentary vision). Activation of parietal cortex, the frontal eye field
(FEF), and the supplementary eye field (SEF) as well as
reduced activation in V1 was shown by a flash stimulus in
these patients. One patient, who showed complete recovery of visual function, was scanned three times. Ac-
tivation of FEF and SEF was found in the first two
sessions when the patient had only rudimentary vision,
but not in the third session when the patient’s field defects had resolved. Because these structures are related
to eye movements and spatial attention, and activation of
these areas other than primary visual cortex was not observed in normal volunteers, they suggested that this
result might have reflected changes in responsiveness of
extravisual areas related to attention in patients with severely reduced vision.
Kleiser et al. [25•] examined activation of primary visual
cortex in three patients with incomplete homonymous
hemianopia. The patients viewed radial reversing checkerboards within their impaired, but not absolutely blind,
visual fields. Data acquisition was also performed while
the intact visual fields were stimulated. One patient
showed comparable activation (in terms of the mean signal change and the number of significant voxels) of
V1/V2 during the stimulation of either affected or intact
visual field. However, activation of ipsilesional V1/V2
could not be detected during the stimulation of impaired
visual fields in the other two patients. Because the patients identified the stimulus consciously, the authors
speculated that conscious vision could be mediated without V1 activity. However, as the authors mentioned in
the discussion, it is not possible to rule out the existence
of any residual neural activity in the ipsilesional primary
visual cortex from their “negative” finding because these
regions may have had sub-threshold activity that was not
detected by fMRI. Also, this study suggests that fMRI
may not be sensitive enough to detect ipsilesional cortical activation in incomplete homonymous hemianopia.
Goebel et al. [26•] tested two patients with long-standing
postgeniculate lesions using fMRI to study the neural
correlates of ‘blindsight’. For activation of ventral visual
pathway, colored images of natural objects (fruit and vegetables) were presented in the relatively and absolutely
blind visual fields of the patients. The intact visual fields
also were tested with the same stimuli. For activation of
dorsal pathway, a rotating spiral stimulus was used. Eccentricity and polar angle mapping experiments were
performed in the same session. Although the patients
indicated no awareness of the stimuli in most cases,
strong responses to the blind-field stimulation in ipsilesional extrastriate areas in both dorsal (motion complex
(hMT+/V5)) and ventral (LO, and V4/V8) pathways were
found. There was no detectable activation of V1 on the
affected side during the stimulation of the blind regions.
These findings suggest that the activity of the ipsilesional extrastriate cortex alone is insufficient to generate conscious vision.
Functional magnetic resonance imaging of
lateral geniculate nucleus
Few neuroimaging studies have been performed on the
lateral geniculate nucleus (LGN) in humans because of
Functional magnetic resonance image of the visual system Miki et al.
427
Figure 3. Activation in dysplastic visual cortex
Demonstration of visually activated areas in visual cortex in
patients with dysplastic visual cortex but normal visual
fields. (A) Axial T1-weighted anatomical MR images of
Subject 1, with dysplastic cortex (arrow) in the right
parieto-occipital area and a smaller area of dysplasia or
heterotopia in the left mesial occipital region (not marked);
and Subject 2 (T1-weighted), with semilobar
holoprosencephaly, monoventricle, and marked
malformation of the occipital lobes. (B) Demonstration of
visually activated areas in visual cortex for both subjects.
The areas are superimposed upon each subject’s
T1-anatomical axial MR images, each parallel to the
calcarine sulcus, and four contiguous slices containing
visual cortex are shown for each subject. The most dorsal
image is left, and in each image, the left side of the brain is
on the right, and the right side on the left. The yellow
pixels represent the activated areas with a t-statistic
corresponding to a Bonferroni corrected p-value of 0.05.
The red areas are those with more significant t-statistics.
In Subject 2, the activated areas correlated negatively with
the stimulus (performed this way because of the subject’s
age and study was done under sedation). Thus, the
corresponding t-statistics for Subject 1 are: yellow = 4.99
and red = 5.99, for Subject 2 are: yellow = -4.82, and red
= -5.82. (reprinted with permission from Liu GT, et al.
Functional MRI in children with congenital structural
abnormalities of occipital cortex. Neuropediatrics
2000; 31:13–15.)
its relatively small size. However, activation of the LGN
has been successfully identified in several fMRI studies.
Functional magnetic resonance imaging of LGN is a
challenge because the LGN is a deep structure, for
which the use of surface coils does not improve the signal
to noise ratio, unlike for studies of the visual cortex.
Functional magnetic resonance imaging studies on LGN
have been performed using high field MR scanners,
which allow fMRI with high signal to noise ratio [27–33].
In recent reports, activation of LGN has been shown
using a conventional MR scanner at 1.5 Tesla, which is
widely available, both in children [34] and in adults [35].
Retinotopic mapping
Retinotopic mapping is a noninvasive way of identifying
borders between visual areas. V1, V2, V3, and V4 all
contain complete representations of the visual field, and
their borders can be identified by locating representations of vertical and horizontal meridians. For instance,
the vertical meridian is represented at the V1-V2 border,
and the horizontal meridian is represented at the V2-V3
border. Extensive and groundbreaking fMRI works were
performed by Sereno et al. [36], De Yoe et al. [37] and
Engel et al. [38]. More recent experiments [39–41] have
used techniques developed by these groups to study the
responses in different visual areas to various psychophysical stimuli.
Visual areas involved in motion perception
Area V5 (also known as MT+, hMT+, MT/MST,
MT/V5+), the human homologue to the medial temporal
(MT) region in the much-studied macaque brain, is involved in motion perception. Functional magnetic resonance imaging techniques can reliably locate area V5 to
the intersection of the ascending limb of the inferior
temporal sulcus and the lateral occipital sulcus [42].
A variety of motion stimuli, including moving rings, gratings, and dots, have been used to elicit robust activation
in area V5 [42–52], as well as in other motion-responsive
extrastriate areas, including area V3A [45–48] with fMRI.
A recent study found that different cortical areas respond
to form coherence and motion coherence [54]. Activation
in area V5 and other anterior motion-sensitive areas of
cortex [49,50] is reproducible in relation to a motion aftereffect (MAE). Researchers have found that the fMRI
activation in response to static stimuli designed to imply
motion is located in motion-sensitive areas, and theorized that higher brain centers may modulate the motionsensitive response [51].
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Recent studies explored the possible interconnections
between areas V5 and V3a and a larger motionprocessing network. A three-dimensional structure composed of moving dots stimulated activation in V5, the
dorsal posterior occipital gyrus, and the superior occipital
gyrus [52]. Speed discrimination stimuli used in a recent
study increased BOLD activity in areas V3a, V3v, and
V4v [47]. Ahlfors et al. [46] combined the temporal resolution of MEG with fMRI to examine the cortical responses to sudden changes in direction of motion. They
found that V5/MT spikes twice, both before and after
primary visual cortex and area V3 [46]. When Ffytche et
al. noted that hemifield motion stimulation activated
contralateral V5 before ipsilateral V5, they postulated
two parallel pathways to V5, each selective to motion
direction [53]. In a recent case report concerning a patient with an extensive callosal lesion, ipsilateral stimulation resulted in less activation than bilateral stimulation, suggesting the non-callosal transfer of motion
information between cerebral hemispheres [54].
Using fMRI techniques, Rees et al. [45] combined an
fMRI paradigm with primate single-neuron data to propose a direct relationship between macaque V5 neuronal
firing rate and BOLD activation in human subjects in
response to coherently moving dots. This study was
strengthened by subsequent data showing significantly
different spikes per second per neuron measurements
versus percent change in BOLD signal in V1 and V5,
respectively [55]. Heeger et al. [56] also combined data
from electrophysiologic cell recordings with fMRI to suggest that certain cell populations in V5 are directionally
selective, and thus exhibit “motion opponency.” These
latter experiments represent an exciting new trend, as
fMRI’s spatial resolution is bolstered by various imaging
modalities with superior temporal resolution, such as
MEG and electrophysiology, to further characterize areas
of motion–sensitive cortex.
Functional magnetic resonance imaging of
visual attention
During the past few years, there has been a prolific body
of research in which fMRI has been used to study visual
attention. Visual attention can be defined as the process
whereby the visual system uses mental focus to foveate
on specific parts of the visual field, as cues in perception
and preattentive processes attract interest. Early visual
cortical areas respond more robustly to attended versus
unattended stimuli [57].
Berman et al. [58] investigated the neural correlates of
pursuits and saccades using fMRI at 3 Tesla. Pursuit and
saccades compared to eye fixation activated the frontal
eye field, supplementary eye field, the intraparietal
sulcus, the precuneus, and the anterior and posterior
cingulate cortices. In conclusion, an overlap of
saccades/pursuits and spatial attention was proposed.
Similarly, Nobre et al. [59] examined the overlap in brain
function of visual spatial attention and saccades using
fMRI. These two behaviors seem to have great overlap
in neural systems including frontal and parietal regions,
with greater activation during the covert spatial attention
task (perceiving brief peripheral targets and reaction
timed responses) in relation to the oculomotor task.
Hoffman and Haxby [60] attempted to dissociate eye
gaze perception and facial perception. Face perception
was correlated with preferential activation in the inferior
occipital and fusiform gyri; whereas eye gaze seemed to
involve the superior temporal sulci and the intraparietal
sulcus previously associated with spatial attention. Kim et
al. [61] showed spatial attention to be associated with the
frontal eye fields, posterior parietal cortex, the cingulate
gyrus, the putamen, the thalamus, the anterior insula,
dorsolateral prefrontal cortex, temporo-occipital cortex in
the middle and inferior temporal gyri, the supplementary
motor area, and the cerebellum. Unique to the spatial
priming task was a preferential lateralization to the right
parietal lobe. Similarly, LaBar et al. [62] showed an overlap of working memory localization with visual spatial
attention that included the intraparietal sulcus, ventral
precentral sulcus, supplementary motor area, frontal eye
fields, thalamus, cerebellum, left temporal neocortex,
and right insula. Activation unique to visual spatial attention included the occipitotemporal junction and extrastriate cortex.
Many fMRI studies have provided evidence that visual
attention modulates visual perception via a top-down
cognitive process [63–66]. Heeger [63] showed that one’s
performance on visual perceptual tasks related to visual
attention. Greenlee [57] showed that attentional processes modulated the amplitude of the BOLD signal in
response to motion in V5. Smith et al. [66] illustrated the
converse by showing suppression of activity levels in all
other regions outside of the visual cortex. More specifically, Sunaert et al. [67] and Huk and Heeger [68] both
used fMRI to show that visual attention modulates perception of motion as indicated by activity levels in V5.
Beauchamp et al. [69] exemplified a similar modulation
of attention on color perception in the anterior and medial color selective areas of the collateral sulcus and
the fusiform gyrus. Their research suggested that attentive viewing (versus passive viewing) could be modulated by color when it was germane to a task, as shown
via brain activation.
In summary, studies using fMRI have shown that brain
areas mediating eye movements may also be involved in
visual attention. Furthermore, visual attention modulates
the activity of visual cortical areas in response to motion,
color, and other perceptive cues via a top-down process.
Functional magnetic resonance image of the visual system Miki et al.
Reproducibility of functional magnetic
resonance imaging
Reproducibility of cortical activation in a single subject,
especially in quantitative data, needs to be addressed
before assessing the effects of treatments and longitudinal follow up of patients with fMRI. If activation varies
considerably between sessions, effects of a treatment
would be difficult to access with fMRI. In fact, reproducibility of activation between sessions (separated by
several days) varies across subjects, even when a simple
flash visual stimulus is used [70]. The fMRI responses
tested in single subjects during motor, cognitive, and
visual paradigms over multiple sessions found significant
session-by-condition interactions, ie, quite variable activation in each session [71].
Various factors could affect the reproducibility of fMRI,
such as variations in attention, habituation, or scanner
condition. Tests are not always consistent even at higher
magnetic fields, and improvement in signal to noise ratio
apparently does not contribute to the reproducibility
[72,73]. Acquisition of multiple sessions may disclose reliability of the activation obtained (whether it is truly
active or not) but this is not always practical especially in
patients, because subject cooperation limits the length
and number of scanning sessions. Further investigations
will be necessary to see how the variability in fMRI can
be controlled.
Alternative functional magnetic resonance
imaging methods
Whereas BOLD contrast is a reflection of brain activity
via blood oxygenation and increased blood flow, it is
possible using MRI techniques to measure blood flow
directly. This might represent a more accurate measurement of the location of brain activity. It is possible to
manipulate the proton spins of water in blood such that
the blood becomes “tagged”, and this tagged blood will
thus travel to a region of interest and interact with the
brain parenchyma. The interaction of the tagged blood
and tissue affects the region’s T1. By detecting how the
T1 is changed during a sequence where blood is labeled
to one where blood is not, one can calculate perfusion to
that region. The techniques to do this fall under the
category of arterial spin labeling (ASL). Two different
types of ASL exist: pulsed and continuous. In pulsed
ASL, a bolus of blood is labeled, whereas in continuous
ASL, blood is continuously labeled. Because the tagging
schemes of the two types of ASL are different, the mathematics required to solve for perfusion for the two techniques are different. This means that different conditions
and limitations exist for the techniques. Echo-planar
imaging and signal targeting with alternating radio frequency (EPISTAR) [74], proximal inversion with a control for off-resonance effects (PICORE) [75], and flowsensitive alternating inversion recovery (FAIR) [76] are
429
examples of pulsed ASL techniques, whereas the technique by Alsop et al. [77] is an example of continuous ASL.
The advantage of using ASL techniques in fMRI is its
spatial specificity. Because ASL labels arteries, it should
theoretically show areas of brain with increased arterial
flow. BOLD, on the other hand, may be susceptible to
the “draining vein” effect; veins far away from the area of
activation also have increased blood oxygenation and
thus is detected as active [78]. ASL avoids this because
the tag is lost by the time the blood water reaches veins
that are far from the region of activity. Another advantage
of ASL is that the acquisition of perfusion signal is such
that it is possible to obtain perfusion and BOLD data
simultaneously [75]; this can confirm or possibly enhance
the areas of activation detected in an fMRI experiment.
Lastly, ASL’s ability to measure blood flow quantitatively is a vast advantage over BOLD; BOLD contrast
have arbitrary units and is hence difficult to perform
intersubject comparisons of levels of activity. ASL, on
the other hand, has the ability to measure blood flow in
absolute units of flow. Since the techniques are relatively
new in the MR field, they have not been applied to
fMRI studies of the visual system nearly as much as the
BOLD contrast technique. The techniques have been
applied mostly to study global cerebral blood flow, and
the few functional studies done have been studies of the
motor cortex. In one study of the visual cortex using
FAIR, robust signal changes were detected [79].
Conclusion
Functional magnetic resonance imaging has been used in
clinical and research studies in patients with visual disturbances and for understanding the neural correlates of
the visual system. The preliminary results are encouraging, especially in research studies. Because fMRI techniques still continue to evolve, fMRI promises to be a
valuable tool in the understanding of ophthalmologic disorders with neural bases.
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was reduced in these patients, there was additional activation of the frontal eye
fields, the supplementary eye fields, and the parietal cortex. In a patient with complete recovery, such extraoccipital activation disappeared when the patient’s visual
field recovered to normal.
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