I have some problems concerning geopandas and fiona when using the read_file
function. Here is my traceback:
df = gpd.read_file('/Users/danqing0703/github/Land-Use-Simulation/LBS_Data_Fetching/osm_api/singapore_roads.geojson')
---------------------------------------------------------------------------
ImportError Traceback (most recent call last)
<ipython-input-3-0c9777b3c6b2> in <module>()
----> 1 boros = GeoDataFrame.from_file('nybb.shp')
/Users/danqing0703/anaconda/lib/python2.7/site-packages/geopandas/geodataframe.pyc in from_file(cls, filename, **kwargs)
159
160 """
--> 161 return geopandas.io.file.read_file(filename, **kwargs)
162
163 @classmethod
/Users/danqing0703/anaconda/lib/python2.7/site-packages/geopandas/io/file.pyc in read_file(filename, **kwargs)
9 opening the file.
10 """
---> 11 import fiona
12 bbox = kwargs.pop('bbox', None)
13 with fiona.open(filename, **kwargs) as f:
/Users/danqing0703/anaconda/lib/python2.7/site-packages/fiona/__init__.py in <module>()
70 from six import string_types
71
---> 72 from fiona.collection import Collection, BytesCollection, vsi_path
73 from fiona._drivers import driver_count, GDALEnv, supported_drivers
74 from fiona.odict import OrderedDict
/Users/danqing0703/anaconda/lib/python2.7/site-packages/fiona/collection.py in <module>()
5 import sys
6
----> 7 from fiona.ogrext import Iterator, ItemsIterator, KeysIterator
8 from fiona.ogrext import Session, WritingSession
9 from fiona.ogrext import (
ImportError: dlopen(/Users/danqing0703/anaconda/lib/python2.7/site-packages/fiona/ogrext.so, 2): Library not loaded: /usr/local/lib/libjpeg.8.dylib
Referenced from: /usr/local/lib/libgdal.1.dylib
Reason: Incompatible library version: libgdal.1.dylib requires version 13.0.0 or later, but libjpeg.8.dylib provides version 12.0.0
conda update jpeg
could fix issue. Did you pip installfiona
? It's linked against systems libjpeg, which is a rather bad sign. If feasible I would change to conda's version. If that's not an option you have to reinstallfiona
with pip.pip uninstall
followed byconda install
should work.