(Q41839548)

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Identification of a potential general acid/base in the reversible phosphoryl transfer reactions catalyzed by tyrosine recombinases: Flp H305.

scientific article published on February 2007

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26 December 2019

Identification of a potential general acid/base in the reversible phosphoryl transfer reactions catalyzed by tyrosine recombinases: Flp H305 (English)

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Europe PubMed Central

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26 December 2019

Katrine Whiteson

1

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26 December 2019

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Yu Chen

2

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26 December 2019

Neeraj Chopra

3

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26 December 2019

Amy C Raymond

4

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26 December 2019

Phoebe A Rice

5

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26 December 2019

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1 February 2007

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26 December 2019

Chemistry and Biology

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26 December 2019

14

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26 December 2019

2

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26 December 2019

121-129

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26 December 2019

describes a project that uses

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1857323/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Mechanisms of site-specific recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Reversed DNA strand cleavage specificity in initiation of Cre-LoxP recombination induced by the His289Ala active-site substitution

1 reference

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6 June 2018

A structural basis for allosteric control of DNA recombination by lambda integrase.

1 reference

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6 June 2018

Understanding the transition states of phosphodiester bond cleavage: insights from heavy atom isotope effects

1 reference

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6 June 2018

Guarding the genome: electrostatic repulsion of water by DNA suppresses a potent nuclease activity of topoisomerase IB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

The role of the conserved Trp330 in Flp-mediated recombination. Functional and structural analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Structural plasticity of the Flp-Holliday junction complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

DNA topoisomerases: structure, function, and mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

A structural view of cre-loxp site-specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Crystal structure of a Flp recombinase-Holliday junction complex: assembly of an active oligomer by helix swapping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Vaccinia topoisomerase and Cre recombinase catalyze direct ligation of activated DNA substrates containing a 3'-para-nitrophenyl phosphate ester

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Stereochemical outcome and kinetic effects of Rp- and Sp-phosphorothioate substitutions at the cleavage site of vaccinia type I DNA topoisomerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Chemical approaches to the study of protein tyrosine kinases and their implications for mechanism and inhibitor design

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Comparative kinetic analysis of FLP and cre recombinases: mathematical models for DNA binding and recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Improved properties of FLP recombinase evolved by cycling mutagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Ras-catalyzed hydrolysis of GTP: a new perspective from model studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Cleavage-dependent ligation by the FLP recombinase. Characterization of a mutant FLP protein with an alteration in a catalytic amino acid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Catalytic activity of α-chymotrypsin in which histidine-57 has been methylated

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Dissecting the catalytic triad of a serine protease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

The 2 micron circle plasmid of Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

Step-arrest mutants of FLP recombinase: implications for the catalytic mechanism of DNA recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

6 June 2018

The structure of the transition state of the heterodimeric topoisomerase I of Leishmania donovani as a vanadate complex with nicked DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

18 August 2018

Catalytic phosphoryl interactions of topoisomerase IB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

18 August 2018

A one-pot total synthesis of crambin

1 reference

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18 August 2018

Proton relay mechanism of general acid catalysis by DNA topoisomerase IB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

18 August 2018

Alcoholysis and strand joining by the Flp site-specific recombinase. Mechanistically equivalent reactions mediated by distinct catalytic configurations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1857323

18 August 2018

Structural basis for broad DNA-specificity in integron recombination

1 reference

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3 November 2018

DNA cleavage in trans by the active site tyrosine during Flp recombination: Switching protein partners before exchanging strands

1 reference

https://pubmed.ncbi.nlm.nih.gov/17317566

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence-specific cleavage of DNA via nucleophilic attack of hydrogen peroxide, assisted by Flp recombinase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17317566

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Histidine 265 is important for covalent catalysis by vaccinia topoisomerase and is conserved in all eukaryotic type I enzymes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17317566

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Half-att site substrates reveal the homology independence and minimal protein requirements for productive synapsis in lambda excisive recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/17317566

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein-based asymmetry and protein-protein interactions in FLP recombinase-mediated site-specific recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/17317566

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.CHEMBIOL.2007.01.011

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17317566%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17317566%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17317566%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

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