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English
False discovery rates of protein identifications: a strike against the two-peptide rule
scientific article published on September 2009
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scholarly article
1 reference
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Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
title
False discovery rates of protein identifications: a strike against the two-peptide rule
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
author
Nitin Gupta
series ordinal
1
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stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
Pavel A. Pevzner
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2
object named as
Pavel A Pevzner
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
publication date
1 September 2009
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stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
published in
Journal of Proteome Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
volume
8
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
issue
9
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
page(s)
4173-4181
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
cites work
Spectral dictionaries: Integrating de novo peptide sequencing with database search of tandem mass spectra
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Comparative proteogenomics: combining mass spectrometry and comparative genomics to analyze multiple genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Peptidomics: the integrated approach of MS, hyphenated techniques and bioinformatics for neuropeptide analysis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Clustering millions of tandem mass spectra
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Assigning significance to peptides identified by tandem mass spectrometry using decoy databases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Advancement in protein inference from shotgun proteomics using peptide detectability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Probability model for assessing proteins assembled from peptide sequences inferred from tandem mass spectrometry data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
SwePep, a database designed for endogenous peptides and mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Interpretation of shotgun proteomic data: the protein inference problem
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
A Heuristic method for assigning a false-discovery rate for protein identifications from Mascot database search results
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
TANDEM: matching proteins with tandem mass spectra
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
A statistical model for identifying proteins by tandem mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Mass spectrometry-based proteomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
10 September 2017
A bayesian approach to protein inference problem in shotgun proteomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
17 June 2018
Semi-supervised learning for peptide identification from shotgun proteomics datasets.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
21 August 2018
A predictive model for identifying proteins by a single peptide match
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
21 August 2018
Reporting protein identification data: the next generation of guidelines.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
21 August 2018
InsPecT: identification of posttranslationally modified peptides from tandem mass spectra
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
21 August 2018
Potential for false positive identifications from large databases through tandem mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
21 August 2018
The need for guidelines in publication of peptide and protein identification data: Working Group on Publication Guidelines for Peptide and Protein Identification Data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
21 August 2018
Qscore: an algorithm for evaluating SEQUEST database search results
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398614
retrieved
21 August 2018
Identifiers
DOI
10.1021/PR9004794
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
PMC publication ID
3398614
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
PubMed publication ID
19627159
1 reference
stated in
Europe PubMed Central
PMC publication ID
3398614
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19627159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
ResearchGate publication ID
26690494
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