(Q36497490)

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Unprecedented Melioidosis Cases in Northern Australia Caused by an Asian Burkholderia pseudomallei Strain Identified by Using Large-Scale Comparative Genomics

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14 August 2017

Unprecedented Melioidosis Cases in Northern Australia Caused by an Asian Burkholderia pseudomallei Strain Identified by Using Large-Scale Comparative Genomics (English)

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Europe PubMed Central

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14 August 2017

Burkholderia pseudomallei

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comparative genomics

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based on heuristic

inferred from title

15

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Mirjam Kaestli

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14 August 2017

Glenda Harrington

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Glenda Harrington

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14 August 2017

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Bart J Currie

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14 August 2017

Derek S Sarovich

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Derek S Sarovich

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14 August 2017

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Erin P Price

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14 August 2017

14

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Paul Keim

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14 August 2017

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Yuwana Podin

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Mark Mayo

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14 August 2017

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Jason W Sahl

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14 August 2017

Vanessa Theobald

6

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Vanessa Theobald

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14 August 2017

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Carina M Hall

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14 August 2017

Heidie Hornstra

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Heidie M Hornstra

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14 August 2017

9

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Evan McRobb

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14 August 2017

author name string

Emma J Smith

3

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14 August 2017

Barbara MacHunter

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David M Wagner

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14 August 2017

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publication date

25 November 2015

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14 August 2017

Applied and Environmental Microbiology

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14 August 2017

82

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14 August 2017

3

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Europe PubMed Central

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14 August 2017

954-963

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Use of Whole-Genome Sequencing to Link Burkholderia pseudomallei from Air Sampling to Mediastinal Melioidosis, Australia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

What drives the occurrence of the melioidosis bacterium Burkholderia pseudomallei in domestic gardens?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Whole-Genome Sequences of 80 Environmental and Clinical Isolates of Burkholderia pseudomallei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Melioidosis: evolving concepts in epidemiology, pathogenesis, and treatment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Whole-genome assemblies of 56 burkholderia species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Whole-genome sequencing confirms that Burkholderia pseudomallei multilocus sequence types common to both Cambodia and Australia are due to homoplasy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Whole-genome sequencing of Burkholderia pseudomallei isolates from an unusual melioidosis case identifies a polyclonal infection with the same multilocus sequence type

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

SPANDx: a genomics pipeline for comparative analysis of large haploid whole genome re-sequencing datasets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

An outbreak of respiratory tularemia caused by diverse clones of Francisella tularensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Distribution of Burkholderia pseudomallei in northern Australia, a land of diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Burkholderia pseudomallei type G in Western Hemisphere

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Variable virulence factors in Burkholderia pseudomallei (melioidosis) associated with human disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Complete Genome Sequence of the Encephalomyelitic Burkholderia pseudomallei Strain MSHR305

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Melioidosis at Royal Darwin Hospital in the big 2009-2010 wet season: comparison with the preceding 20 years

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

ART: a next-generation sequencing read simulator.

1 reference

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30 September 2017

Diversity of 16S-23S rDNA internal transcribed spacer (ITS) reveals phylogenetic relationships in Burkholderia pseudomallei and its near-neighbors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Epidemiological tracking and population assignment of the non-clonal bacterium, Burkholderia pseudomallei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Out of the ground: aerial and exotic habitats of the melioidosis bacterium Burkholderia pseudomallei in grasses in Australia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Epidemiology and investigation of melioidosis, Southern Arizona

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Burkholderia pseudomallei in unchlorinated domestic bore water, Tropical Northern Australia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Melioidosis: a clinical overview

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Increasing incidence of human melioidosis in Northeast Thailand

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

A horizontal gene transfer event defines two distinct groups within Burkholderia pseudomallei that have dissimilar geographic distributions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Australian and Thai isolates of Burkholderia pseudomallei are distinct by multilocus sequence typing: revision of a case of mistaken identity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

PLINK: a tool set for whole-genome association and population-based linkage analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Using BOX-PCR to exclude a clonal outbreak of melioidosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Assessing the reliability of eBURST using simulated populations with known ancestry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Nonrandom distribution of Burkholderia pseudomallei clones in relation to geographical location and virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Development and evaluation of a real-time PCR assay targeting the type III secretion system of Burkholderia pseudomallei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Transmission of Burkholderia pseudomallei via breast milk in northern Australia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Isolates of Burkholderia pseudomallei from Northern Australia are distinct by multilocus sequence typing, but strain types do not correlate with clinical presentation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Multilocus Sequence Typing and Evolutionary Relationships among the Causative Agents of Melioidosis and Glanders, Burkholderia pseudomallei and Burkholderia mallei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Endemic melioidosis in tropical northern Australia: a 10-year prospective study and review of the literature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Ecology of Burkholderia pseudomallei and the interactions between environmental Burkholderia spp. and human-animal hosts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Single-tube genotyping without oligonucleotide probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

30 September 2017

Biogeography of Burkholderia pseudomallei in the Torres Strait Islands of Northern Australia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

28 June 2018

Burkholderia pseudomallei sequence type 562 in China and Australia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

21 September 2018

Editorial commentary: melioidosis in Puerto Rico: the iceberg slowly emerges

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

21 September 2018

Characterisation of predominant molecular patterns of Burkholderia pseudomallei in Taiwan

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

21 September 2018

Melioidosis in Birds and Burkholderia pseudomallei Dispersal, Australia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4725268

21 September 2018

Isolation of avian influenza viruses from two different transhemispheric migratory shorebird species in Australia

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21 September 2018

Factor V Leiden: detection in whole blood by ASA PCR using an additional mismatch in antepenultimate position

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Burkholderia pseudomallei sequencing identifies genomic clades with distinct recombination, accessory, and epigenetic profiles

1 reference

https://pubmed.ncbi.nlm.nih.gov/26607593

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/26607593

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.03013-15

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Europe PubMed Central

PMC publication ID

14 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

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