(Q35748683)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

title

Protein identification by spectral networks analysis (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

4

Pavel A Pevzner

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

1

Nuno Bandeira

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

author name string

Ari Frank

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

language of work or name

English

0 references

publication date

2 April 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

28 December 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

volume

104

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

issue

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

page(s)

6140-6145

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

De novo peptide sequencing and identification with precision mass spectrometry

28 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Effects of modified digestion schemes on the identification of proteins from complex mixtures

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Identification of post-translational modifications by blind search of mass spectra.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

New data base-independent, sequence tag-based scoring of peptide MS/MS data validates Mowse scores, recovers below threshold data, singles out modified peptides, and assesses the quality of MS/MS techniques

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

P-Mod: an algorithm and software to map modifications to peptide sequences using tandem MS data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Tryptophan deficiency arrests chromatin breakdown in secondary lens fibers of rats.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

TANDEM: matching proteins with tandem mass spectra

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Shotgun identification of protein modifications from protein complexes and lens tissue

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Peptide sequence motif analysis of tandem MS data with the SALSA algorithm

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time-of-flight mass spectrometry and BLAST homology searching

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

De novo peptide sequencing via tandem mass spectrometry

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Sequence database searches via de novo peptide sequencing by tandem mass spectrometry

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Rapid 'de novo' peptide sequencing by a combination of nanoelectrospray, isotopic labeling and a quadrupole/time-of-flight mass spectrometer.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

The sequence of human betaB1-crystallin cDNA allows mass spectrometric detection of betaB1 protein missing portions of its N-terminal extension

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Error-tolerant identification of peptides in sequence databases by peptide sequence tags

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

27 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

Probability-based protein identification by searching sequence databases using mass spectrometry data

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

PepNovo: de novo peptide sequencing via probabilistic network modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

Mutation-tolerant protein identification by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

ModifiComb, a new proteomic tool for mapping substoichiometric post-translational modifications, finding novel types of modifications, and fingerprinting complex protein mixtures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

Shotgun protein sequencing by tandem mass spectra assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

Unimod: Protein modifications for mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

Discovering known and unanticipated protein modifications using MS/MS database searching

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

De novo peptide sequencing by two-dimensional fragment correlation mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701130104

SPIDER: software for protein identification from sequence tags with de novo sequencing error.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851064

Identification of protein modifications using MS/MS de novo sequencing and the OpenSea alignment algorithm

25 September 2018

1 reference

12 December 2020

Identification of an artifact in the mass spectrometry of proteins derivatized with iodoacetamide

1 reference

12 December 2020

Extent of Modifications in Human Proteome Samples and Their Effect on Dynamic Range of Analysis in Shotgun Proteomics

1 reference

12 December 2020

Experimental Protein Mixture for Validating Tandem Mass Spectral Analysis

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0701130104

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

0 references

journals/pnas/BandeiraTFP07

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17404225%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

PubMed publication ID

17404225

1 reference