(Q33922491)

30 July 2017

title

Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine (English)

1 reference

30 July 2017

0 references

Seung-Gi Jin

1

1 reference

30 July 2017

Swati Kadam

series ordinal

2

1 reference

30 July 2017

Gerd P Pfeifer

series ordinal

3

1 reference

30 July 2017

language of work or name

English

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publication date

5 April 2010

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30 July 2017

published in

Nucleic Acids Research

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30 July 2017

volume

38

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30 July 2017

issue

11

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30 July 2017

page(s)

e125

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Methods for genome-wide analysis of DNA methylation in intestinal tumors

30 July 2017

cites work

1 reference

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Oxygenase catalyzed 5-methylcytosine hydroxylation

5 July 2018

1 reference

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Prediction of novel families of enzymes involved in oxidative and other complex modifications of bases in nucleic acids

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

A human B cell methylome at 100-base pair resolution

5 July 2018

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DNA methylation: an introduction to the biology and the disease-associated changes of a promising biomarker.

5 July 2018

1 reference

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Cancer epigenomics: DNA methylomes and histone-modification maps

5 July 2018

1 reference

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Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

MBD3L1 is a transcriptional repressor that interacts with methyl-CpG-binding protein 2 (MBD2) and components of the NuRD complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

Oxidative damage to methyl-CpG sequences inhibits the binding of the methyl-CpG binding domain (MBD) of methyl-CpG binding protein 2 (MeCP2).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

The affinity of different MBD proteins for a specific methylated locus depends on their intrinsic binding properties

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

An unexpectedly high excision capacity for mispaired 5-hydroxymethyluracil in human cell extracts

5 July 2018

1 reference

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The DNA methyltransferases of mammals

5 July 2018

1 reference

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COBRA: a sensitive and quantitative DNA methylation assay

5 July 2018

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High sensitivity mapping of methylated cytosines

5 July 2018

1 reference

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Digestion of highly modified bacteriophage DNA by restriction endonucleases

5 July 2018

1 reference

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Phylogenetic evidence of a role for 5-hydroxymethyluracil-DNA glycosylase in the maintenance of 5-methylcytosine in DNA.

5 July 2018

1 reference

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In vivo mapping of a DNA adduct at nucleotide resolution: detection of pyrimidine (6-4) pyrimidone photoproducts by ligation-mediated polymerase chain reaction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

X inactivation, differentiation, and DNA methylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

Reaction of bisulfite with the 5-hydroxymethyl group in pyrimidines and in phage DNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

Cytosine-5-methyltransferases add aldehydes to DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

MIRA-assisted microarray analysis, a new technology for the determination of DNA methylation patterns, identifies frequent methylation of homeodomain-containing genes in lung cancer cells

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

Methylated-CpG island recovery assay: a new technique for the rapid detection of methylated-CpG islands in cancer

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887978

DNA modification mechanisms and gene activity during development

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20371518

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA methylation: Bisulphite modification and analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20371518

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ223

1 reference

30 July 2017

1 reference

30 July 2017

1 reference