(Q33319084)

25 July 2017

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title

Physiological heterogeneity in biofilms (English)

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25 July 2017

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Philip S Stewart

1

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25 July 2017

Michael J Franklin

series ordinal

2

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25 July 2017

language of work or name

English

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publication date

1 March 2008

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Nature Reviews Microbiology

25 July 2017

published in

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25 July 2017

volume

6

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25 July 2017

issue

3

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25 July 2017

page(s)

199-210

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Bacterial biofilms: from the natural environment to infectious diseases

25 July 2017

cites work

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Pseudomonas aeruginosa tolerance to tobramycin, hydrogen peroxide and polymorphonuclear leukocytes is quorum-sensing dependent

31 March 2020

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Compromised Host Defense on Pseudomonas aeruginosa Biofilms: Characterization of Neutrophil and Biofilm Interactions

31 March 2020

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Regulation of lateral flagella gene transcription in Vibrio parahaemolyticus

31 March 2020

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Surface-induced swarmer cell differentiation of Vibrio parahaemolyticus

31 March 2020

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Substratum-induced morphological changes in a marine bacterium and their relevance to biofilm structure

31 March 2020

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The promise and peril of transcriptional profiling in biofilm communities

31 March 2020

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Pseudomonas aeruginosa displays multiple phenotypes during development as a biofilm

31 March 2020

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Characterization of temporal protein production in Pseudomonas aeruginosa biofilms

31 March 2020

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Initiation of biofilm formation in Pseudomonas fluorescens WCS365 proceeds via multiple, convergent signalling pathways: a genetic analysis

31 March 2020

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Strain-specific proteome responses of Pseudomonas aeruginosa to biofilm-associated growth and to calcium

31 March 2020

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Effects of biofilm structures on oxygen distribution and mass transport

31 March 2020

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Spatial patterns of DNA replication, protein synthesis, and oxygen concentration within bacterial biofilms reveal diverse physiological states

31 March 2020

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Effect of temperature and light on growth of and photosynthesis by Synechococcus isolates typical of those predominating in the octopus spring microbial mat community of Yellowstone National Park

31 March 2020

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Microbial diversity in natural environments: focusing on fundamental questions

31 March 2020

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Oral microbial communities: biofilms, interactions, and genetic systems

31 March 2020

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31 March 2020

Diffusion in biofilms

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Methane microprofiles in a sewage biofilm determined with a microscale biosensor.

31 March 2020

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A H2S microsensor for profiling biofilms and sediments: application in an acidic lake sediment

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

A fast-responding CO2microelectrode for profiling sediments, microbial mats, and biofilms

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Resistance of biofilms to the catalase inhibitor 3-amino-1,2, 4-triazole

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Measurement of chlorine dioxide penetration in dairy process pipe biofilms during disinfection

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

The effect of pH profiles in methanogenic aggregates on the kinetics of acetate conversion

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Spatial variations in growth rate within Klebsiella pneumoniae colonies and biofilm

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Surface sensing and adhesion of Escherichia coli controlled by the Cpx-signaling pathway

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Communication among oral bacteria

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Characterization of colony morphology variants isolated from Streptococcus pneumoniae biofilms

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Evolution of species interactions in a biofilm community

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

sigmaB regulates IS256-mediated Staphylococcus aureus biofilm phenotypic variation

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Vibrio cholerae O1 El Tor: identification of a gene cluster required for the rugose colony type, exopolysaccharide production, chlorine resistance, and biofilm formation

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Characterization of in vitro biofilm-associated pneumococcal phase variants of a clinically relevant serotype 3 clone

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Phenotypic diversification and adaptation of Serratia marcescens MG1 biofilm-derived morphotypes

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Characterization of colony morphology variants isolated from Pseudomonas aeruginosa biofilms

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Biofilm formation by the small colony variant phenotype of Pseudomonas aeruginosa

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Evolving stealth: genetic adaptation of Pseudomonas aeruginosa during cystic fibrosis infections

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Characterization of a Pseudomonas putida rough variant evolved in a mixed-species biofilm with Acinetobacter sp. strain C6.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Self-generated diversity produces "insurance effects" in biofilm communities

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Biofilm diversity as a test of the insurance hypothesis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Initiation of biofilm formation by Pseudomonas aeruginosa 57RP correlates with emergence of hyperpiliated and highly adherent phenotypic variants deficient in swimming, swarming, and twitching motilities

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Differentiation of chitinase-active and non-chitinase-active subpopulations of a marine bacterium during chitin degradation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Spatial and temporal variations in chitinolytic gene expression and bacterial biomass production during chitin degradation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Noise-based switches and amplifiers for gene expression

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Stochastic mechanisms in gene expression

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Stochastic gene expression in a single cell

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Bistability and biofilm formation in Bacillus subtilis

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

A major protein component of the Bacillus subtilis biofilm matrix

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Fruiting body formation by Bacillus subtilis

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Persister cells and tolerance to antimicrobials

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Persister cells, dormancy and infectious disease

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Non-inherited antibiotic resistance.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Bacterial persistence as a phenotypic switch

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Bacterial persistence: a model of survival in changing environments

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Kinase activity of overexpressed HipA is required for growth arrest and multidrug tolerance in Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

Ectopic overexpression of wild-type and mutant hipA genes in Escherichia coli: effects on macromolecular synthesis and persister formation

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

PhoU is a persistence switch involved in persister formation and tolerance to multiple antibiotics and stresses in Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1838

GlpD and PlsB participate in persister cell formation in Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Evaluation of the redox dye 5-cyano-2,3-tolyl-tetrazolium chloride for activity studies by simultaneous use of microautoradiography and fluorescence in situ hybridization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Effects of substrates and phosphate on INT (2-(4-iodophenyl)-3-(4-nitrophenyl)-5-phenyl tetrazolium chloride) and CTC (5-cyano-2,3-ditolyl tetrazolium chloride) reduction in Escherichia coli.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Differential efficacy of a chlorine dioxide-containing sanitizer against single species and binary biofilms of a dairy-associated Bacillus cereus and a Pseudomonas fluorescens isolate

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Attenuation of Pseudomonas aeruginosa virulence by quorum sensing inhibitors

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Heavy metal resistance of biofilm and planktonic Pseudomonas aeruginosa

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Analysis of the effects of chlorhexidine on oral biofilm vitality and structure based on viability profiling and an indicator of membrane integrity.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Involvement of nitric oxide in biofilm dispersal of Pseudomonas aeruginosa

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Assessment and interpretation of bacterial viability by using the LIVE/DEAD BacLight Kit in combination with flow cytometry

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

New methodology for viability testing in environmental samples

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Mechanism and use of the commercially available viability stain, BacLight

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Action of chlorhexidine digluconate against yeast and filamentous forms in an early-stage Candida albicans biofilm

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Chelator-induced dispersal and killing of Pseudomonas aeruginosa cells in a biofilm.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Differentiation and distribution of colistin- and sodium dodecyl sulfate-tolerant cells in Pseudomonas aeruginosa biofilms.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

The transition metal gallium disrupts Pseudomonas aeruginosa iron metabolism and has antimicrobial and antibiofilm activity

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Spatial distribution of vital and dead microorganisms in dental biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Comparison of three assays for the quantification of Candida biomass in suspension and CDC reactor grown biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Actively growing bacteria in the inland sea of Japan, identified by combined bromodeoxyuridine immunocapture and denaturing gradient gel electrophoresis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Community structure of actively growing bacterial populations in plant pathogen suppressive soil

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Identification of psl, a locus encoding a potential exopolysaccharide that is essential for Pseudomonas aeruginosa PAO1 biofilm formation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Two genetic loci produce distinct carbohydrate-rich structural components of the Pseudomonas aeruginosa biofilm matrix

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Role of alginate and its O acetylation in formation of Pseudomonas aeruginosa microcolonies and biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Extracellular DNA Required for Bacterial Biofilm Formation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

A characterization of DNA release in Pseudomonas aeruginosa cultures and biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Calcium-induced virulence factors associated with the extracellular matrix of mucoid Pseudomonas aeruginosa biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Assessment of lectin-binding analysis for in situ detection of glycoconjugates in biofilm systems

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

In situ evidence for microdomains in the polymer matrix of bacterial microcolonies

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Contribution of alginate and levan production to biofilm formation by Pseudomonas syringae

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Application of fluorescently labelled lectins for the visualization and biochemical characterization of polysaccharides in biofilms of Pseudomonas aeruginosa

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Stratified growth in Pseudomonas aeruginosa biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Spatiometabolic stratification of Shewanella oneidensis biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Contributions of antibiotic penetration, oxygen limitation, and low metabolic activity to tolerance of Pseudomonas aeruginosa biofilms to ciprofloxacin and tobramycin

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Arginine or nitrate enhances antibiotic susceptibility of Pseudomonas aeruginosa in biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Dynamics and spatial distribution of beta-lactamase expression in Pseudomonas aeruginosa biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Quorum sensing, gene expression, and Pseudomonas biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Timing and localization of rhamnolipid synthesis gene expression in Pseudomonas aeruginosa biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Effects of iron on DNA release and biofilm development by Pseudomonas aeruginosa

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Quorum sensing in Staphylococcus aureus biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Multidrug efflux pumps: expression patterns and contribution to antibiotic resistance in Pseudomonas aeruginosa biofilms.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Candida albicans SNO1 and SNZ1 expressed in stationary-phase planktonic yeast cells and base of biofilm

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Involvement of bacterial migration in the development of complex multicellular structures in Pseudomonas aeruginosa biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Biofilm resistance to antimicrobial agents

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Fluorescence in situ hybridization using peptide nucleic acid probes for rapid detection of Mycobacterium avium subsp. avium and Mycobacterium avium subsp. paratuberculosis in potable-water biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Catalyzed reporter deposition-fluorescence in situ hybridization allows for enrichment-independent detection of microcolony-forming soil bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Bacterial communities associated with benthic organic matter in headwater stream microhabitats

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Combining in situ reverse transcriptase polymerase chain reaction, optical microscopy, and X-ray photoelectron spectroscopy to investigate mineral surface-associated microbial activities

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Linking microbial community structure with function: fluorescence in situ hybridization-microautoradiography and isotope arrays

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Ecophysiological interaction between nitrifying bacteria and heterotrophic bacteria in autotrophic nitrifying biofilms as determined by microautoradiography-fluorescence in situ hybridization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Phylogenetic identification and substrate uptake patterns of sulfate-reducing bacteria inhabiting an oxic-anoxic sewer biofilm determined by combining microautoradiography and fluorescent in situ hybridization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Laser Capture Microdissection: Molecular Analysis of Tissue

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Laser capture microdissection

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Rapid diffusion of fluorescent tracers into Staphylococcus epidermidis biofilms visualized by time lapse microscopy

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Observations of cell cluster hollowing in Staphylococcus epidermidis biofilms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Magnetic resonance microscopy of biofilm structure and impact on transport in a capillary bioreactor.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

Distribution of sulfate-reducing bacteria, O2, and H2S in photosynthetic biofilms determined by oligonucleotide probes and microelectrodes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

A nitrite microsensor for profiling environmental biofilms.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

Microsensor measurements of sulfate reduction and sulfide oxidation in compact microbial communities of aerobic biofilms.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

Use of a fluorescent redox probe for direct visualization of actively respiring bacteria

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

Use of 5-cyano-2,3-ditolyl tetrazolium chloride for quantifying planktonic and sessile respiring bacteria in drinking water

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

Substratum topography influences susceptibility of Salmonella enteritidis biofilms to trisodium phosphate

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

Distribution of bacterial growth activity in flow-chamber biofilms

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

In Situ Gene Expression in Mixed-Culture Biofilms: Evidence of Metabolic Interactions between Community Members

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

Activity and three-dimensional distribution of toluene-degrading Pseudomonas putida in a multispecies biofilm assessed by quantitative in situ hybridization and scanning confocal laser microscopy

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1838

7 January 2021

Identifiers

DOI

10.1038/NRMICRO1838

1 reference

Dimensions Publication ID

25 July 2017

1026288009

0 references

1 reference