(Q29617430)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

title

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells (English)

2 references

PubMed

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23685454

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

single cell transcriptomics

1 March 2020

main subject

transcriptome

0 references

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Schraga Schwartz

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Joshua Levin

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

18

Aviv Regev

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

2

Rahul Satija

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

5

Jellert T Gaublomme

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

15

Nir Hacohen

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

8

Nir Yosef

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

13

Andreas Gnirke

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

14

Alon Goren

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

11

John J Trombetta

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

4

Rona S Gertner

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

6

Raktima Raychowdhury

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

3

Xian Adiconis

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

12

Dave Gennert

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

17

Hongkun Park

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

author name string

Christine Malboeuf

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Diana Lu

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23685454

1 March 2020

language of work or name

1 reference

30 April 2017

publication date

19 May 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

external data available at URL

1 March 2020

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE41265

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23685454

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

volume

498

2 references

PubMed

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23685454

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

issue

7453

2 references

PubMed

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23685454

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

page(s)

236-240

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

1 March 2020

cell culture

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

https://www.nxn.se/single-cell-studies/data.tsv

cites work

Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Genomic analysis at the single-cell level

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

mRNA-Seq whole-transcriptome analysis of a single cell

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Causal protein-signaling networks derived from multiparameter single-cell data

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals

30 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

CEL-Seq: single-cell RNA-Seq by multiplexed linear amplification

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Multi-layered stochasticity and paracrine signal propagation shape the type-I interferon response

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

The RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Stochastic expression of the interferon-β gene

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Analysis of alternative splicing of cassette exons at single-cell level using two fluorescent proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Counting absolute numbers of molecules using unique molecular identifiers

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Central dogma at the single-molecule level in living cells

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Cell‐to‐cell variability of alternative RNA splicing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Single-cell quantification of IL-2 response by effector and regulatory T cells reveals critical plasticity in immune response

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Analysis and design of RNA sequencing experiments for identifying isoform regulation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Single-cell NF-kappaB dynamics reveal digital activation and analogue information processing.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Single-molecule approaches to stochastic gene expression

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Dynamic proteomics of individual cancer cells in response to a drug.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Frequency-modulated nuclear localization bursts coordinate gene regulation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Variability and memory of protein levels in human cells

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Noise in protein expression scales with natural protein abundance

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Regulation of the transcriptional activity of the IRF7 promoter by a pathway independent of interferon signaling.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Inferring cellular networks using probabilistic graphical models

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683364

Disruption of E-cadherin-mediated adhesion induces a functionally distinct pathway of dendritic cell maturation

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNATURE12172

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23685454

21 January 2018

Identifiers

3 references

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

1 March 2020

1035006736

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23685454

3 references

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23685454

1 March 2020

PubMed publication ID

3 references

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23685454%20AND%20SRC:MED&resulttype=core&format=json