Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q24609173)
Watch
English
RNA sequence analysis using covariance models
scientific article
In more languages
default for all languages
No label defined
No description defined
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
title
RNA sequence analysis using covariance models
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
main subject
RNA analysis
1 reference
based on heuristic
inferred from title
author
Richard M. Durbin
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
Sean Eddy
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
author name string
S R Eddy
series ordinal
1
0 references
language of work or name
English
0 references
publication date
1 June 1994
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
published in
Nucleic Acids Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
volume
22
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
issue
11
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
page(s)
2079-2088
1 reference
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
cites work
Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Improved tools for biological sequence comparison
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Encoded combinatorial chemistry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Basic local alignment search tool
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
A general method applicable to the search for similarities in the amino acid sequence of two proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
In vitro selection of RNA molecules that bind specific ligands
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Introns as mobile genetic elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Spliceosomal snRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Comparative and functional anatomy of group II catalytic introns—a review
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
On finding all suboptimal foldings of an RNA molecule
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Hidden Markov models in computational biology. Applications to protein modeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Information content of binding sites on nucleotide sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
CLUSTAL V: improved software for multiple sequence alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
7 April 2017
The nucleolar snRNAs: catching up with the spliceosomal snRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
The PROSITE dictionary of sites and patterns in proteins, its current status
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Hidden Markov models of biological primary sequence information
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Compilation of tRNA sequences and sequences of tRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Prediction of common folding structures of homologous RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
A computer program to search for tRNA genes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Secondary structure model for 23S ribosomal RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Secondary structure of 16S ribosomal RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Repeat sequence families derived from mammalian tRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
A program for the identification of tRNA-like structures in DNA sequence data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Structure and function of signal recognition particle RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Biological catalysis by RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
A set of tRNAs that lack either the T psi C arm or the dihydrouridine arm: towards a minimal tRNA adaptor.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Regulation of ferritin and transferrin receptor mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Regulation of HIV gene expression by RNA-protein interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Phylogenetic analysis and evolution of RNase P RNA in proteobacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Comparing multiple RNA secondary structures using tree comparisons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
The complete DNA sequence of yeast chromosome III
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
The C. elegans genome sequencing project: a beginning
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Small catalytic RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Comprehensive sequence analysis of the 182 predicted open reading frames of yeast chromosome III.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Structural and functional aspects of RNA pseudoknots
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
27 September 2017
Selection of DNA binding sites by regulatory proteins. Statistical-mechanical theory and application to operators and promoters.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Matching relational patterns in nucleic acid sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Mechanism of 3' splice site selection by the catalytic core of the sunY intron of bacteriophage T4: the role of a novel base-pairing interaction in group I introns
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Profile analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Inferring consensus structure from nucleic acid sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Identifying potential tRNA genes in genomic DNA sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Pattern searching/alignment with RNA primary and secondary structures: an effective descriptor for tRNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Selection in vitro of an RNA enzyme that specifically cleaves single-stranded DNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
30 May 2018
Pattern analysis of RNA secondary structure similarity and consensus of minimal-energy folding.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
19 June 2018
Ancient conserved regions in new gene sequences and the protein databases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
28 November 2018
Automatic identification of group I intron cores in genomic DNA sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308124
retrieved
28 November 2018
The signal recognition particle database (SRPDB)
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/8029015
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Isolation of new ribozymes from a large pool of random sequences [see comment]
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/8029015
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
5S RNA secondary structure
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/8029015
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
[25] Protein multiple sequence alignment and flexible pattern matching
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/8029015
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/22.11.2079
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1985427
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
OpenCitations bibliographic resource ID
1985427
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1985427
PMC publication ID
308124
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1985427
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
PubMed publication ID
8029015
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1985427
stated in
Europe PubMed Central
PMC publication ID
308124
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8029015%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 October 2019
ResearchGate publication ID
15170262
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit