Diversispora cerifera and Diversispora succinacia are new arbuscular mycorrhizal fungal species, ... more Diversispora cerifera and Diversispora succinacia are new arbuscular mycorrhizal fungal species, that have been isolated and propagated from spores of rhizospheric soils of native vegetation that had naturally established from seeds on a nickel mine tailings test basin in New-Caledonia. Interestingly, these species were not recorded from ultrama c soils of maquis vegetation endemic to New-Caledonia surrounding the tailings basin. In greenhouse trap and single species cultures, fungi produced numerous spores, which were formed terminally or intercalary on subtending hyphae. Spores of D. cerifera are white yellow with a waxy appearance and spores of D. succinacia are translucent, amber in color. Spores of the two species are globose to subglobose. Spores of D. cerifera 70-100-120 µm in diameter and have three spore wall layers. Spores of D. succinacia 60-80 - 110 µm in diameter and have two spore wall layers. D. cerifera forms a monophyletic clade next to D. aurantia that has a subtending hyphal wall that is continuous with layers 1-3 of the spore wall. Instead, the hyphal wall for D. cerifera is continuous only with layers 1 and 2 of the spore wall. Morphologically and phylogenetically, D. succinacia is close to D. sabulosa and forms a monophyletic clade next to D. sabulosa that has smaller spores.
Shrimp rearing generate organic waste that is trapped in the pond sediment. In excess, these wast... more Shrimp rearing generate organic waste that is trapped in the pond sediment. In excess, these wastes may impair aquaculture ecosystem and shrimps’ health. To promote the biological oxidation of accumulated organic waste, the pond is drained and dried at the end of each production cycle. However, this practice is not always conducive to maintaining microbial decomposition activities in sediments. Shrimp production in New Caledonia is no exception to this problem of pollution of pond bottoms. One promising way of treating this waste would be bioremediation, using a native halophyte plant and its microbiota. Thus, this study explored the nutrient removal potential of Suaeda australis and its microbiota on sediments from four shrimp farms. Suaeda australis was grown in an experimental greenhouse for 6 months. In order to mimic the drying out of the sediments, pots containing only sediments were left to dry in the open air without halophytes. An analysis of the chemical composition and ac...
Leptospira is a complex bacterial genus which biodiversity has long been overlooked. In the recen... more Leptospira is a complex bacterial genus which biodiversity has long been overlooked. In the recent years however, environmental studies have contributed to shed light on its original and current environmental habitat. Although very fragile bacteria in laboratories, Leptospira have been shown to successfully occupy a range of soil and freshwater habitats. Recent work has strongly suggested that biofilm formation, a multicellular lifestyle regulated by the second messenger c-di-GMP, might be one strategy developed to overcome the multiple challenges of environmental survival. Within the genus, a minority of pathogenic species have developed the ability to infect mammals and be responsible for leptospirosis. However, most of them have retained their environmental survival capacity, which is required to fulfill their epidemiological cycle. Indeed, susceptible hosts, such as human, suffer from various symptoms, while reservoir hosts stay asymptomatic and release bacteria in the environme...
Background In New-Caledonia, at the end of each shrimp production cycle, earthen ponds are draine... more Background In New-Caledonia, at the end of each shrimp production cycle, earthen ponds are drained and dried to enhance microbial decomposition of nutrient-rich waste trapped in the sediment during the rearing. However, excessive ponds drying may not be suitable for the decomposition activities of microorganisms. Halophytes, salt tolerant plants, naturally grow at vicinity of shrimp ponds; due to their specificity, we explored whether halophytes cultivation during the pond drying period may be suitable for pond bioremediation. In addition, plants are closely associated with microorganisms, which may play a significant role in organic matter decomposition and therefore in bioremediation. Thus, in this study we aimed to determine the impact of 3 halophyte species (Suaeda australis, Sarcocornia quinqueflora and Atriplex jubata) on active sediment microbial communities and their implications on organic matter degradation. Results Drying significantly decreased the microbial diversity in...
Antibacterial activity of Xylopia pancheri Baill. (Annonaceae) leaf extract was investigated agai... more Antibacterial activity of Xylopia pancheri Baill. (Annonaceae) leaf extract was investigated against susceptible Staphylococcus aureus, methicillin‐resistant S. aureus (MRSA) and extended‐spectrum‐β‐lactamase (ESBL)‐producing Pseudomonas aeruginosa. Results showed that X. pancheri leaf extract displayed antibacterial activity against S. aureus with higher inhibitory effect on MRSA compared to control gentamycin antibiotic, and IC50 value of 36.97 μg/mL [95%CI:29.59–46.18] against MRSA.
Saline ecosystems are often the target of spills and releases of pollutants such as metals, as ma... more Saline ecosystems are often the target of spills and releases of pollutants such as metals, as many industrial companies settle in or around these areas. Metal pollution is a major threat for humans and ecosystems. In line with sustainable development, nature-based solutions and biological tools such as phytoremediation offer eco-friendly and low-cost solutions to remove metals or limit their spread in the environment. Many plant-growth-promoting (PGP) effects are frequently prospected in plant-associated microbes such as the production of auxins, siderophores, or extracellular polymeric substances to enhance phytoremediation. Halophytes are nowadays presented as good phytoremediators for metal-contaminated saline environments such as coastal regions, but little is known about the potential of their associated microbes in the bioaugmentation of this technique. Here, we review the studies that focused on halophytes-associated microbes and their plant-growth-promotion capacities. More...
Plant culture integration within aquaculture activities is a topic of recent interest with econom... more Plant culture integration within aquaculture activities is a topic of recent interest with economic and environmental benefits. Shrimp farming activities generate nutrient-rich waste trapped in the sediments of farming ponds or release in the mangrove area. Thus, we investigate if the halophytes species naturally growing around the pond can use nitrogen and carbon from shrimp farming for remediation purposes. Halophyte biomasses and sediments influenced by shrimp farm effluents, were collected in two farms in New-Caledonia. All samples were analyzed for their C and N stable isotopic composition and N content. Higher δ15N values were found in plants influenced by shrimp farm water thus evidenced their abilities to take nutrient derived from shrimp farming. Deep root species Chenopodium murale, Atriplex jubata, Suaeda australis and Enchylaena tomentosa appears more efficient for shrimp pond remediation. This work demonstrates that halophytes cultivation in shrimp ponds with sediments, could be effective for the pond's remediation.
Mostly studied as a zoonosis, leptospirosis is also an environment-borne infection and most human... more Mostly studied as a zoonosis, leptospirosis is also an environment-borne infection and most human cases originate from soil or water contaminations. Yet, only few studies have been interested in the survival of pathogenic Leptospira in freshwater. In this study, water microcosms were designed to evaluate the survival and virulence of Leptospira spp. for 2 years. Four commercial bottled drinking waters and a non-ionized water, all previously filter-sterilized, were studied. Either one of two Leptospira interrogans strains, one Leptospira borgpetersenii strain, or a saprophytic Leptospira biflexa was inoculated in these waters under nutrient-deprived conditions. Molecular, microscopic and cultural approaches were used to study Leptospira survival. Direct virulence of the pathogens was assessed using animal challenge without re-culturing. Our results confirmed the capacity of pathogenic Leptospira to survive for more than a year in water. In addition, we showed the ability of L. interrogans in nutrient-deprived conditions to directly cause systemic infection in susceptible animals. To our knowledge, this is the first report of direct infection of a susceptible host with Leptospira following a long starvation and survival period in nutrient-deprived water. Our results also suggest that Leptospira turned into a physiological "survival" state in harsh freshwater conditions. These data are of prime importance considering that freshwater is a major source of Leptospira infections. Environmental survival and virulence of pathogenic Leptospira spp. are becoming a crucial challenge to determine the environmental risk and adopt relevant prevention and control strategies.
The ecological restoration of nickel mining-degraded areas in New Caledonia is strongly limited b... more The ecological restoration of nickel mining-degraded areas in New Caledonia is strongly limited by low availability of soil mineral nutrients, metal toxicity, and slow growth rates of native plant species. In order to improve plant growth for restoration programs, special attention was paid to interactions between plant and soil microorganisms. In this study, we evaluated the influence of inoculation with Curtobacterium citreum BE isolated from a New Caledonian ultramafic soil on arbuscular mycorrhizal symbiosis and growth of Tetraria comosa, an endemic sedge used in restoration programs. A greenhouse experiment on ultramafic substrate was conducted with an inoculum comprising two arbuscular mycorrhizal fungi (AMF) species isolated from New Caledonian ultramafic soils: Rhizophagus neocaledonicus and Claroideoglomus etunicatum. The effects on plant growth of the AMF and C. citreum BE inoculated separately were not significant, but their co-inoculation significantly enhanced the dry weight of T. comosa compared with the non-inoculated control. These differences were positively correlated with mycorrhizal colonization which was improved by C. citreum BE. Compared with the control, co-inoculated plants were characterized by better mineral nutrition, a higher Ca/Mg ratio, and lower metal translocation. However, for Ca/Mg ratio and metal translocation, there were no significant differences between the effects of AMF inoculation and co-inoculation.
Diversispora cerifera and Diversispora succinacia are new arbuscular mycorrhizal fungal species, ... more Diversispora cerifera and Diversispora succinacia are new arbuscular mycorrhizal fungal species, that have been isolated and propagated from spores of rhizospheric soils of native vegetation that had naturally established from seeds on a nickel mine tailings test basin in New-Caledonia. Interestingly, these species were not recorded from ultrama c soils of maquis vegetation endemic to New-Caledonia surrounding the tailings basin. In greenhouse trap and single species cultures, fungi produced numerous spores, which were formed terminally or intercalary on subtending hyphae. Spores of D. cerifera are white yellow with a waxy appearance and spores of D. succinacia are translucent, amber in color. Spores of the two species are globose to subglobose. Spores of D. cerifera 70-100-120 µm in diameter and have three spore wall layers. Spores of D. succinacia 60-80 - 110 µm in diameter and have two spore wall layers. D. cerifera forms a monophyletic clade next to D. aurantia that has a subtending hyphal wall that is continuous with layers 1-3 of the spore wall. Instead, the hyphal wall for D. cerifera is continuous only with layers 1 and 2 of the spore wall. Morphologically and phylogenetically, D. succinacia is close to D. sabulosa and forms a monophyletic clade next to D. sabulosa that has smaller spores.
Shrimp rearing generate organic waste that is trapped in the pond sediment. In excess, these wast... more Shrimp rearing generate organic waste that is trapped in the pond sediment. In excess, these wastes may impair aquaculture ecosystem and shrimps’ health. To promote the biological oxidation of accumulated organic waste, the pond is drained and dried at the end of each production cycle. However, this practice is not always conducive to maintaining microbial decomposition activities in sediments. Shrimp production in New Caledonia is no exception to this problem of pollution of pond bottoms. One promising way of treating this waste would be bioremediation, using a native halophyte plant and its microbiota. Thus, this study explored the nutrient removal potential of Suaeda australis and its microbiota on sediments from four shrimp farms. Suaeda australis was grown in an experimental greenhouse for 6 months. In order to mimic the drying out of the sediments, pots containing only sediments were left to dry in the open air without halophytes. An analysis of the chemical composition and ac...
Leptospira is a complex bacterial genus which biodiversity has long been overlooked. In the recen... more Leptospira is a complex bacterial genus which biodiversity has long been overlooked. In the recent years however, environmental studies have contributed to shed light on its original and current environmental habitat. Although very fragile bacteria in laboratories, Leptospira have been shown to successfully occupy a range of soil and freshwater habitats. Recent work has strongly suggested that biofilm formation, a multicellular lifestyle regulated by the second messenger c-di-GMP, might be one strategy developed to overcome the multiple challenges of environmental survival. Within the genus, a minority of pathogenic species have developed the ability to infect mammals and be responsible for leptospirosis. However, most of them have retained their environmental survival capacity, which is required to fulfill their epidemiological cycle. Indeed, susceptible hosts, such as human, suffer from various symptoms, while reservoir hosts stay asymptomatic and release bacteria in the environme...
Background In New-Caledonia, at the end of each shrimp production cycle, earthen ponds are draine... more Background In New-Caledonia, at the end of each shrimp production cycle, earthen ponds are drained and dried to enhance microbial decomposition of nutrient-rich waste trapped in the sediment during the rearing. However, excessive ponds drying may not be suitable for the decomposition activities of microorganisms. Halophytes, salt tolerant plants, naturally grow at vicinity of shrimp ponds; due to their specificity, we explored whether halophytes cultivation during the pond drying period may be suitable for pond bioremediation. In addition, plants are closely associated with microorganisms, which may play a significant role in organic matter decomposition and therefore in bioremediation. Thus, in this study we aimed to determine the impact of 3 halophyte species (Suaeda australis, Sarcocornia quinqueflora and Atriplex jubata) on active sediment microbial communities and their implications on organic matter degradation. Results Drying significantly decreased the microbial diversity in...
Antibacterial activity of Xylopia pancheri Baill. (Annonaceae) leaf extract was investigated agai... more Antibacterial activity of Xylopia pancheri Baill. (Annonaceae) leaf extract was investigated against susceptible Staphylococcus aureus, methicillin‐resistant S. aureus (MRSA) and extended‐spectrum‐β‐lactamase (ESBL)‐producing Pseudomonas aeruginosa. Results showed that X. pancheri leaf extract displayed antibacterial activity against S. aureus with higher inhibitory effect on MRSA compared to control gentamycin antibiotic, and IC50 value of 36.97 μg/mL [95%CI:29.59–46.18] against MRSA.
Saline ecosystems are often the target of spills and releases of pollutants such as metals, as ma... more Saline ecosystems are often the target of spills and releases of pollutants such as metals, as many industrial companies settle in or around these areas. Metal pollution is a major threat for humans and ecosystems. In line with sustainable development, nature-based solutions and biological tools such as phytoremediation offer eco-friendly and low-cost solutions to remove metals or limit their spread in the environment. Many plant-growth-promoting (PGP) effects are frequently prospected in plant-associated microbes such as the production of auxins, siderophores, or extracellular polymeric substances to enhance phytoremediation. Halophytes are nowadays presented as good phytoremediators for metal-contaminated saline environments such as coastal regions, but little is known about the potential of their associated microbes in the bioaugmentation of this technique. Here, we review the studies that focused on halophytes-associated microbes and their plant-growth-promotion capacities. More...
Plant culture integration within aquaculture activities is a topic of recent interest with econom... more Plant culture integration within aquaculture activities is a topic of recent interest with economic and environmental benefits. Shrimp farming activities generate nutrient-rich waste trapped in the sediments of farming ponds or release in the mangrove area. Thus, we investigate if the halophytes species naturally growing around the pond can use nitrogen and carbon from shrimp farming for remediation purposes. Halophyte biomasses and sediments influenced by shrimp farm effluents, were collected in two farms in New-Caledonia. All samples were analyzed for their C and N stable isotopic composition and N content. Higher δ15N values were found in plants influenced by shrimp farm water thus evidenced their abilities to take nutrient derived from shrimp farming. Deep root species Chenopodium murale, Atriplex jubata, Suaeda australis and Enchylaena tomentosa appears more efficient for shrimp pond remediation. This work demonstrates that halophytes cultivation in shrimp ponds with sediments, could be effective for the pond's remediation.
Mostly studied as a zoonosis, leptospirosis is also an environment-borne infection and most human... more Mostly studied as a zoonosis, leptospirosis is also an environment-borne infection and most human cases originate from soil or water contaminations. Yet, only few studies have been interested in the survival of pathogenic Leptospira in freshwater. In this study, water microcosms were designed to evaluate the survival and virulence of Leptospira spp. for 2 years. Four commercial bottled drinking waters and a non-ionized water, all previously filter-sterilized, were studied. Either one of two Leptospira interrogans strains, one Leptospira borgpetersenii strain, or a saprophytic Leptospira biflexa was inoculated in these waters under nutrient-deprived conditions. Molecular, microscopic and cultural approaches were used to study Leptospira survival. Direct virulence of the pathogens was assessed using animal challenge without re-culturing. Our results confirmed the capacity of pathogenic Leptospira to survive for more than a year in water. In addition, we showed the ability of L. interrogans in nutrient-deprived conditions to directly cause systemic infection in susceptible animals. To our knowledge, this is the first report of direct infection of a susceptible host with Leptospira following a long starvation and survival period in nutrient-deprived water. Our results also suggest that Leptospira turned into a physiological "survival" state in harsh freshwater conditions. These data are of prime importance considering that freshwater is a major source of Leptospira infections. Environmental survival and virulence of pathogenic Leptospira spp. are becoming a crucial challenge to determine the environmental risk and adopt relevant prevention and control strategies.
The ecological restoration of nickel mining-degraded areas in New Caledonia is strongly limited b... more The ecological restoration of nickel mining-degraded areas in New Caledonia is strongly limited by low availability of soil mineral nutrients, metal toxicity, and slow growth rates of native plant species. In order to improve plant growth for restoration programs, special attention was paid to interactions between plant and soil microorganisms. In this study, we evaluated the influence of inoculation with Curtobacterium citreum BE isolated from a New Caledonian ultramafic soil on arbuscular mycorrhizal symbiosis and growth of Tetraria comosa, an endemic sedge used in restoration programs. A greenhouse experiment on ultramafic substrate was conducted with an inoculum comprising two arbuscular mycorrhizal fungi (AMF) species isolated from New Caledonian ultramafic soils: Rhizophagus neocaledonicus and Claroideoglomus etunicatum. The effects on plant growth of the AMF and C. citreum BE inoculated separately were not significant, but their co-inoculation significantly enhanced the dry weight of T. comosa compared with the non-inoculated control. These differences were positively correlated with mycorrhizal colonization which was improved by C. citreum BE. Compared with the control, co-inoculated plants were characterized by better mineral nutrition, a higher Ca/Mg ratio, and lower metal translocation. However, for Ca/Mg ratio and metal translocation, there were no significant differences between the effects of AMF inoculation and co-inoculation.
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