d3 library to build circular graphs
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Apr 15, 2024 - JavaScript
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bioinformatics-data
Here are 45 public repositories matching this topic...
Curated list of bioinformatics formats and publications
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Mar 18, 2019
Test data for MultiQC.
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Dec 12, 2024 - HTML
Python code to extract features from Protein sequences for Machine Learning/Deep Learning
windows linux machine-learning bioinformatics deep-learning bioinformatics-pipeline feature-extraction biopython protein-sequences fasta bioinformatics-data extract-features bioinformatics-analysis protein-feature-extraction
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Mar 26, 2022 - Python
Manuscript describing ChronQC is now available online in Bioinformatics
visualization python bioinformatics quality-control ngs bioinformatics-data bioinformatics-analysis qc
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Jun 25, 2019 - HTML
Datastores for reads, not your papa's FASTQ files.
files bam-files bioinformatics genomics storage biology format sequencing fastq-format bioinformatics-data sam-bam fastq fastq-files biojulia sam-file sam-files genomics-data bam-format
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Jul 28, 2023 - Julia
Services and guidelines for normalizing drug and other therapy terms
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Dec 12, 2024 - Python
Repository of Jupyter Notebooks created by the Bio2Byte group
bioinformatics biology proteins jupyter-notebook bioinformatics-data alphafold dynamine agmata disomine efoldmine
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Jul 5, 2024 - Jupyter Notebook
Code examples for working with web based bioinformatics APIs
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Feb 17, 2017 - Jupyter Notebook
dockerfile bioinformatics r docker-image fair bioinformatics-data bioinformatics-databases sra-files rpackage sratoolkit bioinformatics-tool dbgap
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Jul 26, 2019 - Jupyter Notebook
Metadetabase of 13145 records generated for Allergens with a tabular view of the data. Web interface connected to ease the use, analysis and extraction of data with several added functionalities. Tutorial section added to educate the users of the interface design and features and the database.
bioinformatics biology data-extraction bioinformatics-data allergies bioinformatics-databases allergy database-generator bioinfo metadatabase allergic-diseases biological-database biological-databases database-generation-for-allergens allergen-database secondary-database biology-project alleropedia
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Jun 5, 2021 - HTML
implementation of Burrows–Wheeler transform on a Gene Sequence - Bioinformatics Course - Fall 2019
python machine-learning bioinformatics machine-learning-algorithms python-script python3 machinelearning bwt bioinformatics-data bioinformatics-analysis bioinformatics-algorithms bwt-transform
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Sep 29, 2021 - Python
Supplemental material for the paper "Facilitating Prediction of Adverse Drug Reactions by Using Knowledge Graphs and Multi-Label Learning Models".
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Jul 18, 2018 - CSS
A data visualization tool to display tissue expression data for Arabidopsis thaliana
data bioinformatics database data-visualization bioinformatics-data arabidopsis bioinformatics-tool bioinformatics-visualization arabidopsis-thaliana
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Jul 30, 2024 - JavaScript
Reproducible and reusable test data for bioinformatics projects.
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Jun 20, 2022 - Python
Scripts to download the PacBio, ONT and MiSeq datasets used in https://www.nature.com/articles/s41598-017-03996-z and run the pipelines as described in the paper or simply download the final assemblies as generated by the authors.
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Oct 18, 2017 - Shell
A console application for the estimation of the primary and secondary structure's elements. Input should be the FASTA-formatted "ss.txt" file generated by PDB database.
bioinformatics pdb protein-data-bank protein-sequences vb-net bioinformatics-data amino-acids secondary-structure bioinformatics-scripts bioinformatics-databases pdb-files ss-txt protein-secondary-structure
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May 8, 2019 - Visual Basic
Shell script to sort .gtf files
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May 10, 2024 - Shell
A framework for semi-automated analysis of Amplicon Sequencing data
bioinformatics bioinformatics-pipeline bioinformatics-data singularity-containers bioinformatics-containers bioinformatics-scripts singularity-hub
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Sep 19, 2019 - Perl
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